RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 IGKV1D-17A0A075B6S4 117 aa10.41□□□□□ -0.74
PTPRN-202ENST00000409251 IGFBPL1Q8WX77 278 aa10.41□□□□□ -0.74
PTPRN-202ENST00000409251 OR2J3O76001 311 aa10.41□□□□□ -0.74
PTPRN-202ENST00000409251 OR10X1Q8NGY0 326 aa10.41□□□□□ -0.74
PTPRN-202ENST00000409251 LY96Q9Y6Y9 160 aa10.41□□□□□ -0.74
PTPRN-202ENST00000409251 ABCA12Q86UK0 2595 aa10.41□□□□□ -0.74
PTPRN-202ENST00000409251 USP9XQ93008 2570 aaPredicted RBP10.41□□□□□ -0.74
PTPRN-202ENST00000409251 FCGR2BP31994 310 aaPredicted RBP10.4□□□□□ -0.74
PTPRN-202ENST00000409251 SAMD5Q5TGI4 173 aa10.4□□□□□ -0.74
PTPRN-202ENST00000409251 MBD6Q96DN6 1003 aa10.4□□□□□ -0.74
PTPRN-202ENST00000409251 MRPL36Q9P0J6 103 aaKnown RBP10.4□□□□□ -0.74
PTPRN-202ENST00000409251 PRNDQ9UKY0 176 aa10.4□□□□□ -0.74
PTPRN-202ENST00000409251 PLGLAQ15195 96 aa10.4□□□□□ -0.74
PTPRN-202ENST00000409251 RBPMS2Q6ZRY4 209 aaKnown RBP10.4□□□□□ -0.74
PTPRN-202ENST00000409251 CCL3L1P16619 93 aa10.4□□□□□ -0.75
PTPRN-202ENST00000409251 ZNF257Q9Y2Q1 563 aa10.4□□□□□ -0.75
PTPRN-202ENST00000409251 D6R8Y8 96 aa10.39□□□□□ -0.75
PTPRN-202ENST00000409251 PRSS46E5RG02 174 aa10.39□□□□□ -0.75
PTPRN-202ENST00000409251 CD69Q07108 199 aa10.39□□□□□ -0.75
PTPRN-202ENST00000409251 BCL6BQ8N143 479 aaPredicted RBP10.39□□□□□ -0.75
PTPRN-202ENST00000409251 SLC25A10Q9UBX3 287 aaPredicted RBP10.39□□□□□ -0.75
PTPRN-202ENST00000409251 IGLV1-44P01699 117 aa10.39□□□□□ -0.75
PTPRN-202ENST00000409251 IGHV1-46P01743 117 aa10.39□□□□□ -0.75
PTPRN-202ENST00000409251 GLRXP35754 106 aa10.39□□□□□ -0.75
PTPRN-202ENST00000409251 ADAMTSL5Q6ZMM2 481 aa10.39□□□□□ -0.75
PTPRN-202ENST00000409251 FAM90A1Q86YD7 464 aa10.39□□□□□ -0.75
PTPRN-202ENST00000409251 AMN1Q8IY45 258 aa10.39□□□□□ -0.75
PTPRN-202ENST00000409251 VSTM2AQ8TAG5 236 aa10.39□□□□□ -0.75
PTPRN-202ENST00000409251 ARPC1AQ92747 370 aa10.39□□□□□ -0.75
PTPRN-202ENST00000409251 ZNF414Q96IQ9 312 aa10.39□□□□□ -0.75
PTPRN-202ENST00000409251 MRPL20Q9BYC9 149 aaKnown RBP10.39□□□□□ -0.75
PTPRN-202ENST00000409251 Q9H3A6 140 aa10.39□□□□□ -0.75
PTPRN-202ENST00000409251 TMEM213A2RRL7 107 aa10.39□□□□□ -0.75
PTPRN-202ENST00000409251 C15orf65H3BRN8 121 aa10.39□□□□□ -0.75
PTPRN-202ENST00000409251 M0R3E3 92 aa10.39□□□□□ -0.75
PTPRN-202ENST00000409251 MGST3O14880 152 aa10.39□□□□□ -0.75
PTPRN-202ENST00000409251 ATP5G2Q06055 141 aa10.39□□□□□ -0.75
PTPRN-202ENST00000409251 FAM162BQ5T6X4 162 aa10.39□□□□□ -0.75
PTPRN-202ENST00000409251 IGF2-ASQ6U949 168 aa10.39□□□□□ -0.75
PTPRN-202ENST00000409251 KLK15Q9H2R5 256 aa10.39□□□□□ -0.75
PTPRN-202ENST00000409251 MSRB2Q9Y3D2 182 aa10.39□□□□□ -0.75
PTPRN-202ENST00000409251 CSMD2Q7Z408 3487 aa10.38□□□□□ -0.75
PTPRN-202ENST00000409251 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.38□□□□□ -0.75
PTPRN-202ENST00000409251 COX8AP10176 69 aa10.38□□□□□ -0.75
PTPRN-202ENST00000409251 EVI2AP22794 236 aa10.38□□□□□ -0.75
PTPRN-202ENST00000409251 SCGB2A2Q13296 93 aa10.38□□□□□ -0.75
PTPRN-202ENST00000409251 DIAPH2-AS1Q14236 149 aa10.38□□□□□ -0.75
PTPRN-202ENST00000409251 JPT1Q9UK76 154 aa10.38□□□□□ -0.75
PTPRN-202ENST00000409251 MYO9AB2RTY4 2548 aa10.38□□□□□ -0.75
PTPRN-202ENST00000409251 CCDC168Q8NDH2 2452 aa10.38□□□□□ -0.75
PTPRN-202ENST00000409251 IGSF10Q6WRI0 2623 aa10.38□□□□□ -0.75
PTPRN-202ENST00000409251 AGRNO00468 2067 aa10.38□□□□□ -0.75
PTPRN-202ENST00000409251 C9orf118A6NHY6 69 aa10.38□□□□□ -0.75
PTPRN-202ENST00000409251 H3BMG7 143 aa10.38□□□□□ -0.75
PTPRN-202ENST00000409251 TMPRSS3P57727 454 aa10.38□□□□□ -0.75
PTPRN-202ENST00000409251 PET117Q6UWS5 81 aa10.38□□□□□ -0.75
PTPRN-202ENST00000409251 GTSCR1Q86UQ5 136 aa10.38□□□□□ -0.75
PTPRN-202ENST00000409251 SIGMAR1Q99720 223 aa10.38□□□□□ -0.75
PTPRN-202ENST00000409251 DKK2Q9UBU2 259 aa10.38□□□□□ -0.75
PTPRN-202ENST00000409251 RPUSD1Q9UJJ7 312 aaKnown RBP10.38□□□□□ -0.75
PTPRN-202ENST00000409251 THBDP07204 575 aa10.38□□□□□ -0.75
PTPRN-202ENST00000409251 CEACAM3P40198 252 aa10.38□□□□□ -0.75
PTPRN-202ENST00000409251 WFDC2Q14508 124 aa10.38□□□□□ -0.75
PTPRN-202ENST00000409251 C1orf162Q8NEQ5 155 aaPredicted RBP10.38□□□□□ -0.75
PTPRN-202ENST00000409251 HRNRQ86YZ3 2850 aaPredicted RBP10.37□□□□□ -0.75
PTPRN-202ENST00000409251 A0A1B0GUT8 65 aa10.37□□□□□ -0.75
PTPRN-202ENST00000409251 MBNL2Q5VZF2 373 aaKnown RBP10.37□□□□□ -0.75
PTPRN-202ENST00000409251 C16orf54Q6UWD8 224 aa10.37□□□□□ -0.75
PTPRN-202ENST00000409251 CHODLQ9H9P2 273 aa10.37□□□□□ -0.75
PTPRN-202ENST00000409251 G3V4G9 280 aa10.37□□□□□ -0.75
PTPRN-202ENST00000409251 K7EP34 96 aa10.37□□□□□ -0.75
PTPRN-202ENST00000409251 RNASE2P10153 161 aaKnown RBP10.37□□□□□ -0.75
PTPRN-202ENST00000409251 RBPJQ06330 500 aa10.37□□□□□ -0.75
PTPRN-202ENST00000409251 FAM120AOSQ5T036 256 aa10.37□□□□□ -0.75
PTPRN-202ENST00000409251 PATE2Q6UY27 113 aa10.37□□□□□ -0.75
PTPRN-202ENST00000409251 C2orf91Q6ZV80 131 aa10.37□□□□□ -0.75
PTPRN-202ENST00000409251 FAM167A-AS1Q96KT0 104 aa10.37□□□□□ -0.75
PTPRN-202ENST00000409251 TMEM160Q9NX00 188 aa10.37□□□□□ -0.75
PTPRN-202ENST00000409251 CT45A10P0DMU9 189 aa10.37□□□□□ -0.75
PTPRN-202ENST00000409251 IGFL4Q6B9Z1 124 aa10.37□□□□□ -0.75
PTPRN-202ENST00000409251 OR1L8Q8NGR8 309 aa10.37□□□□□ -0.75
PTPRN-202ENST00000409251 TPSG1Q9NRR2 321 aa10.37□□□□□ -0.75
PTPRN-202ENST00000409251 TMEM14BQ9NUH8 114 aa10.37□□□□□ -0.75
PTPRN-202ENST00000409251 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.36□□□□□ -0.75
PTPRN-202ENST00000409251 SMIM13P0DJ93 91 aa10.36□□□□□ -0.75
PTPRN-202ENST00000409251 CKS2P33552 79 aa10.36□□□□□ -0.75
PTPRN-202ENST00000409251 SEC11AP67812 179 aa10.36□□□□□ -0.75
PTPRN-202ENST00000409251 PRCDQ00LT1 54 aa10.36□□□□□ -0.75
PTPRN-202ENST00000409251 EIF4EBP1Q13541 118 aaPredicted RBP10.36□□□□□ -0.75
PTPRN-202ENST00000409251 VPS13CQ709C8 3753 aa10.36□□□□□ -0.75
PTPRN-202ENST00000409251 K7EQM0 130 aa10.36□□□□□ -0.75
PTPRN-202ENST00000409251 RAB9AP51151 201 aa10.36□□□□□ -0.75
PTPRN-202ENST00000409251 ADIPOQQ15848 244 aa10.36□□□□□ -0.75
PTPRN-202ENST00000409251 TMEM249Q2WGJ8 235 aa10.36□□□□□ -0.75
PTPRN-202ENST00000409251 C17orf77Q96MU5 243 aa10.36□□□□□ -0.75
PTPRN-202ENST00000409251 UPK2O00526 184 aa10.35□□□□□ -0.75
PTPRN-202ENST00000409251 LTAP01374 205 aa10.35□□□□□ -0.75
PTPRN-202ENST00000409251 CT45A6P0DMU7 189 aa10.35□□□□□ -0.75
PTPRN-202ENST00000409251 CT45A5P0DMU8 189 aa10.35□□□□□ -0.75
PTPRN-202ENST00000409251 CT45A7P0DMV0 189 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms