RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 NXT2Q9NPJ8 142 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 PEF1Q9UBV8 284 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 FREM1Q5H8C1 2179 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 PCNX3Q9H6A9 2034 aa3.79□□□□□ -1.8
PCDH11X-207ENST00000406881 TRBV19A0A075B6N1 114 aa3.78□□□□□ -1.8
PCDH11X-207ENST00000406881 H3BRN7 92 aa3.78□□□□□ -1.8
PCDH11X-207ENST00000406881 IGLV1-47P01700 117 aa3.78□□□□□ -1.8
PCDH11X-207ENST00000406881 P0C879 139 aa3.78□□□□□ -1.8
PCDH11X-207ENST00000406881 RPL15P61313 204 aaKnown RBP3.78□□□□□ -1.8
PCDH11X-207ENST00000406881 JOSD1Q15040 202 aaPredicted RBP3.78□□□□□ -1.8
PCDH11X-207ENST00000406881 DNLZQ5SXM8 178 aa3.78□□□□□ -1.8
PCDH11X-207ENST00000406881 LDLRAD2Q5SZI1 272 aa3.78□□□□□ -1.8
PCDH11X-207ENST00000406881 LCN12Q6JVE5 192 aa3.78□□□□□ -1.8
PCDH11X-207ENST00000406881 SLC25A34Q6PIV7 304 aa3.78□□□□□ -1.8
PCDH11X-207ENST00000406881 HIST3H2BBQ8N257 126 aa3.78□□□□□ -1.8
PCDH11X-207ENST00000406881 ALKBH7Q9BT30 221 aaPredicted RBP3.78□□□□□ -1.8
PCDH11X-207ENST00000406881 SLC25A2Q9BXI2 301 aa3.78□□□□□ -1.8
PCDH11X-207ENST00000406881 TPSG1Q9NRR2 321 aa3.78□□□□□ -1.8
PCDH11X-207ENST00000406881 TRGV11A0A075B6L2 103 aa3.78□□□□□ -1.8
PCDH11X-207ENST00000406881 M0R381 172 aa3.78□□□□□ -1.8
PCDH11X-207ENST00000406881 ZNF324O75467 553 aaPredicted RBP3.78□□□□□ -1.8
PCDH11X-207ENST00000406881 HOXB4P17483 251 aaPredicted RBP3.78□□□□□ -1.8
PCDH11X-207ENST00000406881 DIAPH2-AS1Q14236 149 aa3.78□□□□□ -1.8
PCDH11X-207ENST00000406881 TCF23Q7RTU1 214 aa3.78□□□□□ -1.8
PCDH11X-207ENST00000406881 NRN1Q9NPD7 142 aa3.78□□□□□ -1.8
PCDH11X-207ENST00000406881 LINC00527Q9UJ94 153 aa3.78□□□□□ -1.8
PCDH11X-207ENST00000406881 NDUFA4O00483 81 aa3.78□□□□□ -1.8
PCDH11X-207ENST00000406881 RNASE4P34096 147 aaKnown RBP3.78□□□□□ -1.8
PCDH11X-207ENST00000406881 UQCRFS1P47985 274 aa3.78□□□□□ -1.8
PCDH11X-207ENST00000406881 ZNF56Q15929 161 aa3.78□□□□□ -1.8
PCDH11X-207ENST00000406881 SCGB1D4Q6XE38 83 aa3.78□□□□□ -1.8
PCDH11X-207ENST00000406881 ZNF841Q6ZN19 808 aa3.78□□□□□ -1.8
PCDH11X-207ENST00000406881 ZNF414Q96IQ9 312 aa3.78□□□□□ -1.8
PCDH11X-207ENST00000406881 DAZ1Q9NQZ3 744 aaKnown RBP3.78□□□□□ -1.8
PCDH11X-207ENST00000406881 MRPL27Q9P0M9 148 aaKnown RBP3.78□□□□□ -1.8
PCDH11X-207ENST00000406881 IGKV2-40A0A087WW87 121 aaPredicted RBP3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 IGKV2D-40P01614 121 aaPredicted RBP3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 HINT1P49773 126 aaPredicted RBP3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 DLX1P56177 255 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 RUSC1-AS1Q66K80 236 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 ODF3L1Q8IXM7 274 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 PIP4P2Q8N4L2 257 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 IGFBPL1Q8WX77 278 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 C5orf30Q96GV9 206 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 ATP6V0BQ99437 205 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 HIST1H2BLQ99880 126 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 PTPN13Q12923 2485 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 POLEQ07864 2286 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 PLP1P60201 277 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 CYYR1Q96J86 154 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 PRDM13Q9H4Q3 707 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 FNDC4Q9H6D8 234 aaPredicted RBP3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 NCOR2Q9Y618 2525 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 CENPVL3A0A0U1RRI6 287 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 GGTLC3B5MD39 225 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 RNF223E7ERA6 249 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 SH2D1AO60880 128 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 SNCGO76070 127 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 IGKV3-20P01619 116 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 Q6ZPA2 131 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 NUP35Q8NFH5 326 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 C10orf105Q8TEF2 133 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 FXYD5Q96DB9 178 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 DUX3Q96PT4 197 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 RHPN1-AS1Q9BWJ2 59 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 YLPM1P49750 1951 aaKnown RBP3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 TMEM238LA0A1B0GVL6 79 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 A6NJY4 79 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 CA1P00915 261 aaPredicted RBP3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 HBDP02042 147 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 ELANEP08246 267 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 Q0VG73 95 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 ERASQ7Z444 233 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 LY6G5BQ8NDX9 201 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 ST6GALNAC6Q969X2 333 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 LAMTOR2Q9Y2Q5 125 aa3.77□□□□□ -1.81
PCDH11X-207ENST00000406881 IGHV4-39P01824 125 aa3.76□□□□□ -1.81
PCDH11X-207ENST00000406881 AMBPP02760 352 aa3.76□□□□□ -1.81
PCDH11X-207ENST00000406881 NMUP48645 174 aa3.76□□□□□ -1.81
PCDH11X-207ENST00000406881 EIF4EBP1Q13541 118 aaPredicted RBP3.76□□□□□ -1.81
PCDH11X-207ENST00000406881 ORMDL2Q53FV1 153 aa3.76□□□□□ -1.81
PCDH11X-207ENST00000406881 ZNF491Q8N8L2 437 aa3.76□□□□□ -1.81
PCDH11X-207ENST00000406881 TNFRSF18Q9Y5U5 241 aa3.76□□□□□ -1.81
PCDH11X-207ENST00000406881 NDUFS7O75251 213 aa3.76□□□□□ -1.81
PCDH11X-207ENST00000406881 NDUFA3O95167 84 aa3.76□□□□□ -1.81
PCDH11X-207ENST00000406881 CD7P09564 240 aa3.76□□□□□ -1.81
PCDH11X-207ENST00000406881 SRSF1Q07955 248 aaKnown RBP eCLIP3.76□□□□□ -1.81
PCDH11X-207ENST00000406881 SRSF9Q13242 221 aaKnown RBP eCLIP3.76□□□□□ -1.81
PCDH11X-207ENST00000406881 Q1RN00 199 aa3.76□□□□□ -1.81
PCDH11X-207ENST00000406881 FAM74A4Q5TZK3 123 aa3.76□□□□□ -1.81
PCDH11X-207ENST00000406881 NIT1Q86X76 327 aa3.76□□□□□ -1.81
PCDH11X-207ENST00000406881 MRPL53Q96EL3 112 aaKnown RBP3.76□□□□□ -1.81
PCDH11X-207ENST00000406881 SSBP4Q9BWG4 385 aaPredicted RBP3.76□□□□□ -1.81
PCDH11X-207ENST00000406881 G3V318 75 aa3.76□□□□□ -1.81
PCDH11X-207ENST00000406881 I3L2K1 104 aa3.76□□□□□ -1.81
PCDH11X-207ENST00000406881 M0R3E3 92 aa3.76□□□□□ -1.81
PCDH11X-207ENST00000406881 IGLV2-23P01705 113 aa3.76□□□□□ -1.81
PCDH11X-207ENST00000406881 CRYGCP07315 174 aa3.76□□□□□ -1.81
PCDH11X-207ENST00000406881 AMMECR1LQ6DCA0 310 aa3.76□□□□□ -1.81
PCDH11X-207ENST00000406881 LYZL1Q6UWQ5 148 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms