RNA–Protein interactions for RNA: ENST00000405600.5

CGREF1-206, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 4 BASIC

Gene CGREF1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-206ENST00000405600 UBE2E2Q96LR5 201 aa12.8□□□□□ -0.36
CGREF1-206ENST00000405600 NAT8Q9UHE5 227 aa12.8□□□□□ -0.36
CGREF1-206ENST00000405600 B4DEV8 164 aa12.79□□□□□ -0.36
CGREF1-206ENST00000405600 RPLP1P05386 114 aaKnown RBP12.79□□□□□ -0.36
CGREF1-206ENST00000405600 SUMO1P63165 101 aaKnown RBP12.79□□□□□ -0.36
CGREF1-206ENST00000405600 RHEBQ15382 184 aa12.79□□□□□ -0.36
CGREF1-206ENST00000405600 TMEM241Q24JQ0 296 aa12.79□□□□□ -0.36
CGREF1-206ENST00000405600 KPRPQ5T749 579 aaPredicted RBP12.79□□□□□ -0.36
CGREF1-206ENST00000405600 LEMD1Q68G75 181 aa12.79□□□□□ -0.36
CGREF1-206ENST00000405600 C18orf65Q6ZTR6 163 aa12.79□□□□□ -0.36
CGREF1-206ENST00000405600 BLNKQ8WV28 456 aa12.79□□□□□ -0.36
CGREF1-206ENST00000405600 PARLQ9H300 379 aa12.79□□□□□ -0.36
CGREF1-206ENST00000405600 IGHV3-35A0A0C4DH35 117 aa12.78□□□□□ -0.36
CGREF1-206ENST00000405600 A0A1W2PS18 150 aa12.78□□□□□ -0.36
CGREF1-206ENST00000405600 LGALS1P09382 135 aaKnown RBP12.78□□□□□ -0.36
CGREF1-206ENST00000405600 ATF4P18848 351 aaPredicted RBP12.78□□□□□ -0.36
CGREF1-206ENST00000405600 BMI1P35226 326 aa12.78□□□□□ -0.36
CGREF1-206ENST00000405600 MYCNOSP40205 109 aa12.78□□□□□ -0.36
CGREF1-206ENST00000405600 GALR1P47211 349 aa12.78□□□□□ -0.36
CGREF1-206ENST00000405600 MEOX2P50222 304 aa12.78□□□□□ -0.36
CGREF1-206ENST00000405600 PDE6HQ13956 83 aa12.78□□□□□ -0.36
CGREF1-206ENST00000405600 MYOZ3Q8TDC0 251 aa12.78□□□□□ -0.36
CGREF1-206ENST00000405600 C4orf3Q8WVX3 66 aa12.78□□□□□ -0.36
CGREF1-206ENST00000405600 C20orf24Q9BUV8 137 aa12.78□□□□□ -0.36
CGREF1-206ENST00000405600 PRELID1Q9Y255 219 aa12.78□□□□□ -0.36
CGREF1-206ENST00000405600 NDUFB4O95168 129 aa12.77□□□□□ -0.37
CGREF1-206ENST00000405600 CRYBB3P26998 211 aa12.77□□□□□ -0.37
CGREF1-206ENST00000405600 RANP62826 216 aaKnown RBP12.77□□□□□ -0.37
CGREF1-206ENST00000405600 PSG9Q00887 426 aa12.77□□□□□ -0.37
CGREF1-206ENST00000405600 LCNL1Q6ZST4 164 aa12.77□□□□□ -0.37
CGREF1-206ENST00000405600 C8orf86Q6ZUL3 223 aa12.77□□□□□ -0.37
CGREF1-206ENST00000405600 REC114Q7Z4M0 266 aa12.77□□□□□ -0.37
CGREF1-206ENST00000405600 WFDC9Q8NEX5 89 aa12.77□□□□□ -0.37
CGREF1-206ENST00000405600 HIST1H2BAQ96A08 127 aa12.77□□□□□ -0.37
CGREF1-206ENST00000405600 ELOVL1Q9BW60 279 aa12.77□□□□□ -0.37
CGREF1-206ENST00000405600 GPR61Q9BZJ8 451 aa12.77□□□□□ -0.37
CGREF1-206ENST00000405600 OTORQ9NRC9 128 aa12.77□□□□□ -0.37
CGREF1-206ENST00000405600 AURKAIP1Q9NWT8 199 aaPredicted RBP12.77□□□□□ -0.37
CGREF1-206ENST00000405600 NOTCH3Q9UM47 2321 aa12.76□□□□□ -0.37
CGREF1-206ENST00000405600 SCO2A0A1W2PP80 73 aa12.76□□□□□ -0.37
CGREF1-206ENST00000405600 GGTLC3B5MD39 225 aa12.76□□□□□ -0.37
CGREF1-206ENST00000405600 S100A9P06702 114 aaKnown RBP12.76□□□□□ -0.37
CGREF1-206ENST00000405600 IGLC2P0DOY2 106 aa12.76□□□□□ -0.37
CGREF1-206ENST00000405600 GPHB5Q86YW7 130 aa12.76□□□□□ -0.37
CGREF1-206ENST00000405600 C5orf17Q8NAS9 161 aa12.76□□□□□ -0.37
CGREF1-206ENST00000405600 CMTM2Q8TAZ6 248 aa12.76□□□□□ -0.37
CGREF1-206ENST00000405600 DUX3Q96PT4 197 aa12.76□□□□□ -0.37
CGREF1-206ENST00000405600 AAMDCQ9H7C9 122 aa12.76□□□□□ -0.37
CGREF1-206ENST00000405600 SDF2L1Q9HCN8 221 aa12.76□□□□□ -0.37
CGREF1-206ENST00000405600 TRBV19A0A075B6N1 114 aa12.75□□□□□ -0.37
CGREF1-206ENST00000405600 PGPA6NDG6 321 aa12.75□□□□□ -0.37
CGREF1-206ENST00000405600 HELTA6NFD8 242 aa12.75□□□□□ -0.37
CGREF1-206ENST00000405600 K7EMT4 169 aa12.75□□□□□ -0.37
CGREF1-206ENST00000405600 BUB3O43684 328 aa12.75□□□□□ -0.37
CGREF1-206ENST00000405600 ZNF253O75346 499 aa12.75□□□□□ -0.37
CGREF1-206ENST00000405600 SLC25A5P05141 298 aaKnown RBP12.75□□□□□ -0.37
CGREF1-206ENST00000405600 AKR1C3P42330 323 aa12.75□□□□□ -0.37
CGREF1-206ENST00000405600 CNN1P51911 297 aaKnown RBP12.75□□□□□ -0.37
CGREF1-206ENST00000405600 RPEL1Q2QD12 228 aa12.75□□□□□ -0.37
CGREF1-206ENST00000405600 Q9H3A6 140 aa12.75□□□□□ -0.37
CGREF1-206ENST00000405600 ZNF586Q9NXT0 402 aa12.75□□□□□ -0.37
CGREF1-206ENST00000405600 UFC1Q9Y3C8 167 aa12.75□□□□□ -0.37
CGREF1-206ENST00000405600 ZNF320A2RRD8 509 aa12.74□□□□□ -0.37
CGREF1-206ENST00000405600 ZNF785A8K8V0 405 aa12.74□□□□□ -0.37
CGREF1-206ENST00000405600 CCL24O00175 119 aa12.74□□□□□ -0.37
CGREF1-206ENST00000405600 MRPS12O15235 138 aaKnown RBP12.74□□□□□ -0.37
CGREF1-206ENST00000405600 TRBV12-3P01733 135 aa12.74□□□□□ -0.37
CGREF1-206ENST00000405600 HOXD3P31249 432 aaPredicted RBP12.74□□□□□ -0.37
CGREF1-206ENST00000405600 DEFB121Q5J5C9 76 aa12.74□□□□□ -0.37
CGREF1-206ENST00000405600 LINC00482Q8N8I6 264 aa12.74□□□□□ -0.37
CGREF1-206ENST00000405600 MCRIP2Q9BUT9 160 aaKnown RBP12.74□□□□□ -0.37
CGREF1-206ENST00000405600 RPS10P5Q9NQ39 176 aa12.74□□□□□ -0.37
CGREF1-206ENST00000405600 LY96Q9Y6Y9 160 aa12.74□□□□□ -0.37
CGREF1-206ENST00000405600 U3KQE9 123 aa12.74□□□□□ -0.37
CGREF1-206ENST00000405600 C7orf77A4D0Y5 90 aa12.73□□□□□ -0.37
CGREF1-206ENST00000405600 C9JCJ5 164 aa12.73□□□□□ -0.37
CGREF1-206ENST00000405600 K7EQM0 130 aa12.73□□□□□ -0.37
CGREF1-206ENST00000405600 PEX7O00628 323 aa12.73□□□□□ -0.37
CGREF1-206ENST00000405600 TAS2R60P59551 318 aa12.73□□□□□ -0.37
CGREF1-206ENST00000405600 ARL6IP6Q8N6S5 226 aa12.73□□□□□ -0.37
CGREF1-206ENST00000405600 ZNF414Q96IQ9 312 aa12.73□□□□□ -0.37
CGREF1-206ENST00000405600 RAX2Q96IS3 184 aa12.73□□□□□ -0.37
CGREF1-206ENST00000405600 OR5B12Q96R08 314 aa12.73□□□□□ -0.37
CGREF1-206ENST00000405600 DAZ1Q9NQZ3 744 aaKnown RBP12.73□□□□□ -0.37
CGREF1-206ENST00000405600 EPDR1Q9UM22 224 aa12.73□□□□□ -0.37
CGREF1-206ENST00000405600 IGHV3OR16-8A0A075B7F1 116 aa12.72□□□□□ -0.37
CGREF1-206ENST00000405600 A0A087WWC5 75 aa12.72□□□□□ -0.37
CGREF1-206ENST00000405600 A0A087X0K7 114 aa12.72□□□□□ -0.37
CGREF1-206ENST00000405600 MT-ND4LP03901 98 aa12.72□□□□□ -0.37
CGREF1-206ENST00000405600 CSN1S1P47710 185 aa12.72□□□□□ -0.37
CGREF1-206ENST00000405600 DEFB136Q30KP8 78 aa12.72□□□□□ -0.37
CGREF1-206ENST00000405600 ATRAIDQ6UW56 229 aa12.72□□□□□ -0.37
CGREF1-206ENST00000405600 SLC50A1Q9BRV3 221 aa12.72□□□□□ -0.37
CGREF1-206ENST00000405600 ATG101Q9BSB4 218 aa12.72□□□□□ -0.37
CGREF1-206ENST00000405600 SMCO4Q9NRQ5 59 aa12.72□□□□□ -0.37
CGREF1-206ENST00000405600 CLEC5AQ9NY25 188 aa12.72□□□□□ -0.37
CGREF1-206ENST00000405600 PRKDCP78527 4128 aaKnown RBP12.72□□□□□ -0.37
CGREF1-206ENST00000405600 SERTM2A0A1B0GWG4 89 aa12.71□□□□□ -0.37
CGREF1-206ENST00000405600 SCO1O75880 301 aa12.71□□□□□ -0.37
CGREF1-206ENST00000405600 RPL35P42766 123 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms