RNA–Protein interactions for RNA: ENST00000404989.1

PARVB-203, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-203ENST00000404989 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.56□□□□□ -0.4
PARVB-203ENST00000404989 CIARTQ8N365 385 aaPredicted RBP12.56□□□□□ -0.4
PARVB-203ENST00000404989 HIST1H2BHQ93079 126 aa12.56□□□□□ -0.4
PARVB-203ENST00000404989 GRAMD2BQ96HH9 432 aa12.56□□□□□ -0.4
PARVB-203ENST00000404989 HIST1H2BNQ99877 126 aa12.56□□□□□ -0.4
PARVB-203ENST00000404989 HIST1H2BMQ99879 126 aa12.56□□□□□ -0.4
PARVB-203ENST00000404989 RNASE7Q9H1E1 156 aaKnown RBP12.56□□□□□ -0.4
PARVB-203ENST00000404989 ZNF492Q9P255 531 aa12.56□□□□□ -0.4
PARVB-203ENST00000404989 CSPG4Q6UVK1 2322 aa12.55□□□□□ -0.4
PARVB-203ENST00000404989 A0A087X0K7 114 aa12.55□□□□□ -0.4
PARVB-203ENST00000404989 CLPSL1A2RUU4 121 aa12.55□□□□□ -0.4
PARVB-203ENST00000404989 IGLV1-40P01703 118 aa12.55□□□□□ -0.4
PARVB-203ENST00000404989 ARL3P36405 182 aa12.55□□□□□ -0.4
PARVB-203ENST00000404989 FABP9Q0Z7S8 132 aa12.55□□□□□ -0.4
PARVB-203ENST00000404989 ACTL10Q5JWF8 245 aa12.55□□□□□ -0.4
PARVB-203ENST00000404989 GOLT1AQ6ZVE7 132 aa12.55□□□□□ -0.4
PARVB-203ENST00000404989 TMEM183AQ8IXX5 376 aa12.55□□□□□ -0.4
PARVB-203ENST00000404989 FRZBQ92765 325 aa12.55□□□□□ -0.4
PARVB-203ENST00000404989 MLST8Q9BVC4 326 aa12.55□□□□□ -0.4
PARVB-203ENST00000404989 PRDM13Q9H4Q3 707 aa12.55□□□□□ -0.4
PARVB-203ENST00000404989 SERTAD4Q9NUC0 356 aa12.55□□□□□ -0.4
PARVB-203ENST00000404989 VPREB3Q9UKI3 123 aa12.55□□□□□ -0.4
PARVB-203ENST00000404989 ZFP30Q9Y2G7 519 aa12.55□□□□□ -0.4
PARVB-203ENST00000404989 SMAD5-AS1Q9Y6J3 95 aa12.55□□□□□ -0.4
PARVB-203ENST00000404989 APCP25054 2843 aa12.55□□□□□ -0.4
PARVB-203ENST00000404989 NBPF19A0A087WUL8 3843 aa12.54□□□□□ -0.4
PARVB-203ENST00000404989 IGHV3OR16-8A0A075B7F1 116 aa12.54□□□□□ -0.4
PARVB-203ENST00000404989 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.54□□□□□ -0.4
PARVB-203ENST00000404989 PHOX2AO14813 284 aa12.54□□□□□ -0.4
PARVB-203ENST00000404989 BUB3O43684 328 aa12.54□□□□□ -0.4
PARVB-203ENST00000404989 PF4V1P10720 104 aa12.54□□□□□ -0.4
PARVB-203ENST00000404989 NDUFA6P56556 154 aa12.54□□□□□ -0.4
PARVB-203ENST00000404989 Q86TA4 180 aa12.54□□□□□ -0.4
PARVB-203ENST00000404989 KLK15Q9H2R5 256 aa12.54□□□□□ -0.4
PARVB-203ENST00000404989 SMIM27A0A1W2PRY6 76 aa12.53□□□□□ -0.4
PARVB-203ENST00000404989 DIRC3C9JPN6 131 aa12.53□□□□□ -0.4
PARVB-203ENST00000404989 NDUFA4O00483 81 aa12.53□□□□□ -0.4
PARVB-203ENST00000404989 HOXA5P20719 270 aa12.53□□□□□ -0.4
PARVB-203ENST00000404989 AKR1D1P51857 326 aa12.53□□□□□ -0.4
PARVB-203ENST00000404989 RPL15P61313 204 aaKnown RBP12.53□□□□□ -0.4
PARVB-203ENST00000404989 NHLRC2Q8NBF2 726 aa12.53□□□□□ -0.4
PARVB-203ENST00000404989 DAZAP1Q96EP5 407 aaKnown RBP12.53□□□□□ -0.4
PARVB-203ENST00000404989 TRAPPC1Q9Y5R8 145 aa12.53□□□□□ -0.4
PARVB-203ENST00000404989 ZNF785A8K8V0 405 aa12.52□□□□□ -0.4
PARVB-203ENST00000404989 S100A8P05109 93 aa12.52□□□□□ -0.4
PARVB-203ENST00000404989 CT83Q5H943 113 aa12.52□□□□□ -0.4
PARVB-203ENST00000404989 WDR73Q6P4I2 378 aa12.52□□□□□ -0.4
PARVB-203ENST00000404989 NUDT10Q8NFP7 164 aa12.52□□□□□ -0.4
PARVB-203ENST00000404989 NUDT11Q96G61 164 aa12.52□□□□□ -0.4
PARVB-203ENST00000404989 SGK494Q96LW2 274 aa12.52□□□□□ -0.4
PARVB-203ENST00000404989 SLC50A1Q9BRV3 221 aa12.52□□□□□ -0.4
PARVB-203ENST00000404989 PRSS22Q9GZN4 317 aa12.52□□□□□ -0.4
PARVB-203ENST00000404989 U3KQE9 123 aa12.52□□□□□ -0.4
PARVB-203ENST00000404989 ABCA12Q86UK0 2595 aa12.52□□□□□ -0.4
PARVB-203ENST00000404989 MAP1AP78559 2803 aaPredicted RBP12.52□□□□□ -0.41
PARVB-203ENST00000404989 CENPEQ02224 2701 aa12.52□□□□□ -0.41
PARVB-203ENST00000404989 IGLV2-11P01706 119 aa12.52□□□□□ -0.41
PARVB-203ENST00000404989 PSG3Q16557 428 aa12.52□□□□□ -0.41
PARVB-203ENST00000404989 TMEM95Q3KNT9 176 aa12.52□□□□□ -0.41
PARVB-203ENST00000404989 IZUMO1RA6ND01 250 aa12.51□□□□□ -0.41
PARVB-203ENST00000404989 TRBV12-3P01733 135 aa12.51□□□□□ -0.41
PARVB-203ENST00000404989 PRR27Q6MZM9 219 aa12.51□□□□□ -0.41
PARVB-203ENST00000404989 PRNTQ86SH4 94 aa12.51□□□□□ -0.41
PARVB-203ENST00000404989 OR4B1Q8NGF8 309 aa12.51□□□□□ -0.41
PARVB-203ENST00000404989 NPFFR1Q9GZQ6 430 aa12.51□□□□□ -0.41
PARVB-203ENST00000404989 CLEC5AQ9NY25 188 aa12.51□□□□□ -0.41
PARVB-203ENST00000404989 PSG8Q9UQ74 426 aa12.51□□□□□ -0.41
PARVB-203ENST00000404989 NAV2Q8IVL1 2488 aa12.51□□□□□ -0.41
PARVB-203ENST00000404989 P01737 135 aa12.5□□□□□ -0.41
PARVB-203ENST00000404989 IGHG4P01861 327 aa12.5□□□□□ -0.41
PARVB-203ENST00000404989 MT-ND6P03923 174 aa12.5□□□□□ -0.41
PARVB-203ENST00000404989 CDX1P47902 265 aaPredicted RBP12.5□□□□□ -0.41
PARVB-203ENST00000404989 SMUG1Q53HV7 270 aa12.5□□□□□ -0.41
PARVB-203ENST00000404989 RASL11AQ6T310 242 aa12.5□□□□□ -0.41
PARVB-203ENST00000404989 LCNL1Q6ZST4 164 aa12.5□□□□□ -0.41
PARVB-203ENST00000404989 OR4X2Q8NGF9 303 aa12.5□□□□□ -0.41
PARVB-203ENST00000404989 TSKUQ8WUA8 353 aa12.5□□□□□ -0.41
PARVB-203ENST00000404989 ZNF331Q9NQX6 463 aaPredicted RBP12.5□□□□□ -0.41
PARVB-203ENST00000404989 A0A1W2PS18 150 aa12.49□□□□□ -0.41
PARVB-203ENST00000404989 A8MWL6 223 aa12.49□□□□□ -0.41
PARVB-203ENST00000404989 APOHP02749 345 aaPredicted RBP12.49□□□□□ -0.41
PARVB-203ENST00000404989 SLC35B1P78383 322 aa12.49□□□□□ -0.41
PARVB-203ENST00000404989 GBGT1Q8N5D6 347 aa12.49□□□□□ -0.41
PARVB-203ENST00000404989 GNB1LQ9BYB4 327 aa12.49□□□□□ -0.41
PARVB-203ENST00000404989 RPP21Q9H633 154 aaKnown RBP12.49□□□□□ -0.41
PARVB-203ENST00000404989 NAT8BQ9UHF3 227 aa12.49□□□□□ -0.41
PARVB-203ENST00000404989 TRAV8-1A0A0A6YYK1 113 aa12.48□□□□□ -0.41
PARVB-203ENST00000404989 C19orf71A6NCJ1 209 aa12.48□□□□□ -0.41
PARVB-203ENST00000404989 SMAD7O15105 426 aaKnown RBP12.48□□□□□ -0.41
PARVB-203ENST00000404989 HOXA3O43365 443 aaPredicted RBP12.48□□□□□ -0.41
PARVB-203ENST00000404989 SAPCD1Q5SSQ6 148 aa12.48□□□□□ -0.41
PARVB-203ENST00000404989 MRPL53Q96EL3 112 aaKnown RBP12.48□□□□□ -0.41
PARVB-203ENST00000404989 FAM231BA6NCW3 169 aa12.47□□□□□ -0.41
PARVB-203ENST00000404989 M0R3E3 92 aa12.47□□□□□ -0.41
PARVB-203ENST00000404989 IGHV3-11P01762 117 aa12.47□□□□□ -0.41
PARVB-203ENST00000404989 C16orf54Q6UWD8 224 aa12.47□□□□□ -0.41
PARVB-203ENST00000404989 Q71RC1 249 aaPredicted RBP12.47□□□□□ -0.41
PARVB-203ENST00000404989 TMEM86BQ8N661 226 aa12.47□□□□□ -0.41
PARVB-203ENST00000404989 FOXC2Q99958 501 aa12.47□□□□□ -0.41
PARVB-203ENST00000404989 GFRA4Q9GZZ7 299 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms