RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 MAP1LC3B2A6NCE7 125 aa9.23□□□□□ -0.93
LINC00339-201ENST00000404210 OR4C46A6NHA9 309 aa9.23□□□□□ -0.93
LINC00339-201ENST00000404210 ZNF705EA8MWA4 302 aaPredicted RBP9.23□□□□□ -0.93
LINC00339-201ENST00000404210 ZNF253O75346 499 aa9.23□□□□□ -0.93
LINC00339-201ENST00000404210 ARL14EPLP0DKL9 152 aa9.23□□□□□ -0.93
LINC00339-201ENST00000404210 GCHFRP30047 84 aa9.23□□□□□ -0.93
LINC00339-201ENST00000404210 PDE6HQ13956 83 aa9.23□□□□□ -0.93
LINC00339-201ENST00000404210 GUCA2BQ16661 112 aa9.23□□□□□ -0.93
LINC00339-201ENST00000404210 BEAN1Q3B7T3 259 aa9.23□□□□□ -0.93
LINC00339-201ENST00000404210 WFDC3Q8IUB2 231 aa9.23□□□□□ -0.93
LINC00339-201ENST00000404210 GBGT1Q8N5D6 347 aa9.23□□□□□ -0.93
LINC00339-201ENST00000404210 SFT2D1Q8WV19 159 aa9.23□□□□□ -0.93
LINC00339-201ENST00000404210 MAP1LC3BQ9GZQ8 125 aa9.23□□□□□ -0.93
LINC00339-201ENST00000404210 TMEM167BQ9NRX6 74 aa9.23□□□□□ -0.93
LINC00339-201ENST00000404210 UBQLN2Q9UHD9 624 aa9.23□□□□□ -0.93
LINC00339-201ENST00000404210 ZNF256Q9Y2P7 627 aaPredicted RBP9.23□□□□□ -0.93
LINC00339-201ENST00000404210 ANK2Q01484 3957 aa9.22□□□□□ -0.93
LINC00339-201ENST00000404210 G3V4G9 280 aa9.22□□□□□ -0.93
LINC00339-201ENST00000404210 TEX46H3BTG2 121 aa9.22□□□□□ -0.93
LINC00339-201ENST00000404210 SOCS3O14543 225 aa9.22□□□□□ -0.93
LINC00339-201ENST00000404210 HBE1P02100 147 aa9.22□□□□□ -0.93
LINC00339-201ENST00000404210 OR10J4P0C629 311 aa9.22□□□□□ -0.93
LINC00339-201ENST00000404210 ID1P41134 155 aa9.22□□□□□ -0.93
LINC00339-201ENST00000404210 LYPD1Q8N2G4 141 aa9.22□□□□□ -0.93
LINC00339-201ENST00000404210 SLC50A1Q9BRV3 221 aa9.22□□□□□ -0.93
LINC00339-201ENST00000404210 CLEC5AQ9NY25 188 aa9.22□□□□□ -0.93
LINC00339-201ENST00000404210 ISLRO14498 428 aa9.21□□□□□ -0.94
LINC00339-201ENST00000404210 SNRPCP09234 159 aaKnown RBP9.21□□□□□ -0.94
LINC00339-201ENST00000404210 TFPI2P48307 235 aa9.21□□□□□ -0.94
LINC00339-201ENST00000404210 PSMB3P49720 205 aa9.21□□□□□ -0.94
LINC00339-201ENST00000404210 FGF8P55075 233 aaPredicted RBP9.21□□□□□ -0.94
LINC00339-201ENST00000404210 UBE2L3P68036 154 aaKnown RBP9.21□□□□□ -0.94
LINC00339-201ENST00000404210 PSG9Q00887 426 aa9.21□□□□□ -0.94
LINC00339-201ENST00000404210 IFITM2Q01629 132 aa9.21□□□□□ -0.94
LINC00339-201ENST00000404210 ZNF767PQ75MW2 155 aa9.21□□□□□ -0.94
LINC00339-201ENST00000404210 BLNKQ8WV28 456 aa9.21□□□□□ -0.94
LINC00339-201ENST00000404210 C16orf92Q96LL3 132 aa9.21□□□□□ -0.94
LINC00339-201ENST00000404210 FAM110AQ9BQ89 295 aa9.21□□□□□ -0.94
LINC00339-201ENST00000404210 TMPRSS5Q9H3S3 457 aa9.21□□□□□ -0.94
LINC00339-201ENST00000404210 ZNF331Q9NQX6 463 aaPredicted RBP9.21□□□□□ -0.94
LINC00339-201ENST00000404210 SORL1Q92673 2214 aa9.21□□□□□ -0.94
LINC00339-201ENST00000404210 TRAV8-2A0A0B4J237 113 aa9.2□□□□□ -0.94
LINC00339-201ENST00000404210 NDUFB4O95168 129 aa9.2□□□□□ -0.94
LINC00339-201ENST00000404210 KRTAP10-11P60412 298 aa9.2□□□□□ -0.94
LINC00339-201ENST00000404210 SNRPD3P62318 126 aaKnown RBP9.2□□□□□ -0.94
LINC00339-201ENST00000404210 PMS2P11Q13670 270 aa9.2□□□□□ -0.94
LINC00339-201ENST00000404210 LYPD6BQ8NI32 183 aa9.2□□□□□ -0.94
LINC00339-201ENST00000404210 NOTCH3Q9UM47 2321 aa9.2□□□□□ -0.94
LINC00339-201ENST00000404210 A0A1W2PRE2 83 aa9.19□□□□□ -0.94
LINC00339-201ENST00000404210 H3BTX0 84 aa9.19□□□□□ -0.94
LINC00339-201ENST00000404210 PPT1P50897 306 aa9.19□□□□□ -0.94
LINC00339-201ENST00000404210 RANP62826 216 aaKnown RBP9.19□□□□□ -0.94
LINC00339-201ENST00000404210 PSG3Q16557 428 aa9.19□□□□□ -0.94
LINC00339-201ENST00000404210 KPRPQ5T749 579 aaPredicted RBP9.19□□□□□ -0.94
LINC00339-201ENST00000404210 IQCF2Q8IXL9 164 aa9.19□□□□□ -0.94
LINC00339-201ENST00000404210 PRELID1Q9Y255 219 aa9.19□□□□□ -0.94
LINC00339-201ENST00000404210 SLC17A3O00476 420 aa9.18□□□□□ -0.94
LINC00339-201ENST00000404210 VWFP04275 2813 aa9.18□□□□□ -0.94
LINC00339-201ENST00000404210 CD7P09564 240 aa9.18□□□□□ -0.94
LINC00339-201ENST00000404210 CCL20P78556 96 aa9.18□□□□□ -0.94
LINC00339-201ENST00000404210 FAM24BQ8N5W8 94 aa9.18□□□□□ -0.94
LINC00339-201ENST00000404210 NKX6-2Q9C056 277 aaPredicted RBP9.18□□□□□ -0.94
LINC00339-201ENST00000404210 AAMDCQ9H7C9 122 aa9.18□□□□□ -0.94
LINC00339-201ENST00000404210 ARL2-SNX15V9GYD0 113 aa9.18□□□□□ -0.94
LINC00339-201ENST00000404210 CMYA5Q8N3K9 4069 aa9.18□□□□□ -0.94
LINC00339-201ENST00000404210 A0A1B0GV50 99 aa9.17□□□□□ -0.94
LINC00339-201ENST00000404210 PGPA6NDG6 321 aa9.17□□□□□ -0.94
LINC00339-201ENST00000404210 OR11H12B2RN74 326 aa9.17□□□□□ -0.94
LINC00339-201ENST00000404210 ZNF688P0C7X2 276 aa9.17□□□□□ -0.94
LINC00339-201ENST00000404210 DEFB131AP59861 70 aa9.17□□□□□ -0.94
LINC00339-201ENST00000404210 CD81P60033 236 aa9.17□□□□□ -0.94
LINC00339-201ENST00000404210 IGFL4Q6B9Z1 124 aa9.17□□□□□ -0.94
LINC00339-201ENST00000404210 GTSCR1Q86UQ5 136 aa9.17□□□□□ -0.94
LINC00339-201ENST00000404210 Q8N1Y9 231 aa9.17□□□□□ -0.94
LINC00339-201ENST00000404210 EXOC3-AS1Q8N2X6 119 aa9.17□□□□□ -0.94
LINC00339-201ENST00000404210 ARL6IP6Q8N6S5 226 aa9.17□□□□□ -0.94
LINC00339-201ENST00000404210 MRPL53Q96EL3 112 aaKnown RBP9.17□□□□□ -0.94
LINC00339-201ENST00000404210 C20orf173Q96LM9 149 aa9.17□□□□□ -0.94
LINC00339-201ENST00000404210 LINC00052Q96N35 136 aa9.17□□□□□ -0.94
LINC00339-201ENST00000404210 Q9H3A6 140 aa9.17□□□□□ -0.94
LINC00339-201ENST00000404210 MAP6D1Q9H9H5 199 aa9.17□□□□□ -0.94
LINC00339-201ENST00000404210 OTORQ9NRC9 128 aa9.17□□□□□ -0.94
LINC00339-201ENST00000404210 C19orf73Q9NVV2 129 aa9.17□□□□□ -0.94
LINC00339-201ENST00000404210 FAM74A7A6NL05 159 aa9.16□□□□□ -0.94
LINC00339-201ENST00000404210 NMBP08949 121 aa9.16□□□□□ -0.94
LINC00339-201ENST00000404210 HLA-DMBP28068 263 aa9.16□□□□□ -0.94
LINC00339-201ENST00000404210 RAB14P61106 215 aa9.16□□□□□ -0.94
LINC00339-201ENST00000404210 SUMO1P63165 101 aaKnown RBP9.16□□□□□ -0.94
LINC00339-201ENST00000404210 ICAM4Q14773 271 aa9.16□□□□□ -0.94
LINC00339-201ENST00000404210 ODF3L2Q3SX64 289 aa9.16□□□□□ -0.94
LINC00339-201ENST00000404210 PSMG4Q5JS54 123 aa9.16□□□□□ -0.94
LINC00339-201ENST00000404210 RXFP4Q8TDU9 374 aa9.16□□□□□ -0.94
LINC00339-201ENST00000404210 PRR25Q96S07 402 aa9.16□□□□□ -0.94
LINC00339-201ENST00000404210 MANBALQ9NQG1 85 aa9.16□□□□□ -0.94
LINC00339-201ENST00000404210 PAGE4O60829 102 aa9.15□□□□□ -0.94
LINC00339-201ENST00000404210 UBE2G2P60604 165 aa9.15□□□□□ -0.94
LINC00339-201ENST00000404210 RNF182Q8N6D2 247 aa9.15□□□□□ -0.94
LINC00339-201ENST00000404210 TXNDC17Q9BRA2 123 aa9.15□□□□□ -0.94
LINC00339-201ENST00000404210 ZNF705FA8MVS1 300 aaPredicted RBP9.14□□□□□ -0.95
LINC00339-201ENST00000404210 RGS13O14921 159 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms