RNA–Protein interactions for RNA: ENST00000402326.1

CBX3P9-201, Transcript of chromobox 3 pseudogene 9, humanhuman

BASIC

Gene CBX3P9, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P9-201ENST00000402326 BORCS5Q969J3 196 aa0.73□□□□□ -2.29
CBX3P9-201ENST00000402326 MUCL1Q96DR8 90 aa0.73□□□□□ -2.29
CBX3P9-201ENST00000402326 TP53RKQ96S44 253 aa0.73□□□□□ -2.29
CBX3P9-201ENST00000402326 RTL8AQ9BWD3 113 aa0.73□□□□□ -2.29
CBX3P9-201ENST00000402326 SMPXQ9UHP9 88 aa0.73□□□□□ -2.29
CBX3P9-201ENST00000402326 MGAMO43451 1857 aa0.73□□□□□ -2.29
CBX3P9-201ENST00000402326 NCAPD3P42695 1498 aa0.73□□□□□ -2.29
CBX3P9-201ENST00000402326 TNS3Q68CZ2 1445 aa0.72□□□□□ -2.29
CBX3P9-201ENST00000402326 TENM1Q9UKZ4 2725 aa0.72□□□□□ -2.29
CBX3P9-201ENST00000402326 FRMPD1Q5SYB0 1578 aa0.72□□□□□ -2.29
CBX3P9-201ENST00000402326 TRBV6-4A0A1B0GX49 114 aa0.72□□□□□ -2.29
CBX3P9-201ENST00000402326 TRDV1A0A1B0GX56 115 aa0.72□□□□□ -2.29
CBX3P9-201ENST00000402326 A0A1W2PRE2 83 aa0.72□□□□□ -2.29
CBX3P9-201ENST00000402326 OR2T8A6NH00 312 aa0.72□□□□□ -2.29
CBX3P9-201ENST00000402326 H7BYZ3 331 aa0.72□□□□□ -2.29
CBX3P9-201ENST00000402326 INE1O15225 51 aa0.72□□□□□ -2.29
CBX3P9-201ENST00000402326 CCL25O15444 150 aa0.72□□□□□ -2.29
CBX3P9-201ENST00000402326 ERC2-IT1O76042 136 aa0.72□□□□□ -2.29
CBX3P9-201ENST00000402326 IFNA4P05014 189 aa0.72□□□□□ -2.29
CBX3P9-201ENST00000402326 RAB5CP51148 216 aa0.72□□□□□ -2.29
CBX3P9-201ENST00000402326 GDF5OSQ5U4N7 250 aa0.72□□□□□ -2.29
CBX3P9-201ENST00000402326 C2orf82Q6UX34 121 aa0.72□□□□□ -2.29
CBX3P9-201ENST00000402326 PRR15Q8IV56 129 aa0.72□□□□□ -2.29
CBX3P9-201ENST00000402326 FAM19A2Q8N3H0 131 aa0.72□□□□□ -2.29
CBX3P9-201ENST00000402326 GRPEL2Q8TAA5 225 aa0.72□□□□□ -2.29
CBX3P9-201ENST00000402326 C4orf3Q8WVX3 66 aa0.72□□□□□ -2.29
CBX3P9-201ENST00000402326 RMND5BQ96G75 393 aaPredicted RBP0.72□□□□□ -2.29
CBX3P9-201ENST00000402326 HYLS1Q96M11 299 aa0.72□□□□□ -2.29
CBX3P9-201ENST00000402326 LINC00052Q96N35 136 aa0.72□□□□□ -2.29
CBX3P9-201ENST00000402326 OR2H1Q9GZK4 316 aa0.72□□□□□ -2.29
CBX3P9-201ENST00000402326 TAF9BQ9HBM6 251 aa0.72□□□□□ -2.29
CBX3P9-201ENST00000402326 FLG2Q5D862 2391 aaPredicted RBP0.72□□□□□ -2.29
CBX3P9-201ENST00000402326 MCM3APO60318 1980 aa0.72□□□□□ -2.29
CBX3P9-201ENST00000402326 ADGBQ8N7X0 1667 aa0.72□□□□□ -2.29
CBX3P9-201ENST00000402326 DLG5Q8TDM6 1919 aa0.72□□□□□ -2.29
CBX3P9-201ENST00000402326 TRPM1Q7Z4N2 1603 aa0.71□□□□□ -2.3
CBX3P9-201ENST00000402326 PLXNA4Q9HCM2 1894 aa0.71□□□□□ -2.3
CBX3P9-201ENST00000402326 CACNA1BQ00975 2339 aa0.71□□□□□ -2.3
CBX3P9-201ENST00000402326 POLEQ07864 2286 aa0.71□□□□□ -2.3
CBX3P9-201ENST00000402326 TRAV5A0A0B4J249 113 aa0.71□□□□□ -2.3
CBX3P9-201ENST00000402326 hDV103S1A0JD37 113 aa0.71□□□□□ -2.3
CBX3P9-201ENST00000402326 C9orf170A2RU37 121 aa0.71□□□□□ -2.3
CBX3P9-201ENST00000402326 C5orf67F2Z3F1 127 aa0.71□□□□□ -2.3
CBX3P9-201ENST00000402326 GABARAPH6UMI1 98 aa0.71□□□□□ -2.3
CBX3P9-201ENST00000402326 M0R2N4 97 aa0.71□□□□□ -2.3
CBX3P9-201ENST00000402326 KLF7O75840 302 aaPredicted RBP0.71□□□□□ -2.3
CBX3P9-201ENST00000402326 CST7O76096 145 aa0.71□□□□□ -2.3
CBX3P9-201ENST00000402326 IFNA21P01568 189 aa0.71□□□□□ -2.3
CBX3P9-201ENST00000402326 MT-ND6P03923 174 aa0.71□□□□□ -2.3
CBX3P9-201ENST00000402326 CXCL8P10145 99 aa0.71□□□□□ -2.3
CBX3P9-201ENST00000402326 FABP2P12104 132 aa0.71□□□□□ -2.3
CBX3P9-201ENST00000402326 S100A11P31949 105 aa0.71□□□□□ -2.3
CBX3P9-201ENST00000402326 RPL35P42766 123 aaKnown RBP0.71□□□□□ -2.3
CBX3P9-201ENST00000402326 B2MP61769 119 aa0.71□□□□□ -2.3
CBX3P9-201ENST00000402326 HRCT1Q6UXD1 115 aa0.71□□□□□ -2.3
CBX3P9-201ENST00000402326 GKN2Q86XP6 184 aa0.71□□□□□ -2.3
CBX3P9-201ENST00000402326 LRRC18Q8N456 261 aa0.71□□□□□ -2.3
CBX3P9-201ENST00000402326 LRTM1Q9HBL6 345 aa0.71□□□□□ -2.3
CBX3P9-201ENST00000402326 MRPL40Q9NQ50 206 aaKnown RBP0.71□□□□□ -2.3
CBX3P9-201ENST00000402326 ORMDL1Q9P0S3 153 aa0.71□□□□□ -2.3
CBX3P9-201ENST00000402326 NAT8BQ9UHF3 227 aa0.71□□□□□ -2.3
CBX3P9-201ENST00000402326 ATPIF1Q9UII2 106 aa0.71□□□□□ -2.3
CBX3P9-201ENST00000402326 NUBP2Q9Y5Y2 271 aa0.71□□□□□ -2.3
CBX3P9-201ENST00000402326 PIK3C2AO00443 1686 aa0.71□□□□□ -2.3
CBX3P9-201ENST00000402326 ADGRB2O60241 1585 aa0.7□□□□□ -2.3
CBX3P9-201ENST00000402326 COL24A1Q17RW2 1714 aa0.7□□□□□ -2.3
CBX3P9-201ENST00000402326 A0A087WSZ3 146 aa0.7□□□□□ -2.3
CBX3P9-201ENST00000402326 IGHV1-58A0A0C4DH39 117 aa0.7□□□□□ -2.3
CBX3P9-201ENST00000402326 F8W1H4 67 aa0.7□□□□□ -2.3
CBX3P9-201ENST00000402326 H0YJX3 145 aa0.7□□□□□ -2.3
CBX3P9-201ENST00000402326 H3BQV1 296 aa0.7□□□□□ -2.3
CBX3P9-201ENST00000402326 KRTAP26-1Q6PEX3 210 aa0.7□□□□□ -2.3
CBX3P9-201ENST00000402326 PHF5AQ7RTV0 110 aaKnown RBP0.7□□□□□ -2.3
CBX3P9-201ENST00000402326 SMIM15Q7Z3B0 74 aa0.7□□□□□ -2.3
CBX3P9-201ENST00000402326 ARPINQ7Z6K5 226 aa0.7□□□□□ -2.3
CBX3P9-201ENST00000402326 FAM216BQ8N7L0 139 aa0.7□□□□□ -2.3
CBX3P9-201ENST00000402326 MRPL57Q9BQC6 102 aaKnown RBP0.7□□□□□ -2.3
CBX3P9-201ENST00000402326 EFCAB11Q9BUY7 163 aa0.7□□□□□ -2.3
CBX3P9-201ENST00000402326 CCDC32Q9BV29 185 aa0.7□□□□□ -2.3
CBX3P9-201ENST00000402326 CENPHQ9H3R5 247 aa0.7□□□□□ -2.3
CBX3P9-201ENST00000402326 DIDO1Q9BTC0 2240 aaKnown RBP0.7□□□□□ -2.3
CBX3P9-201ENST00000402326 KDM6AO15550 1401 aaPredicted RBP0.7□□□□□ -2.3
CBX3P9-201ENST00000402326 KMT2BQ9UMN6 2715 aaPredicted RBP0.7□□□□□ -2.3
CBX3P9-201ENST00000402326 NISCHQ9Y2I1 1504 aa0.69□□□□□ -2.3
CBX3P9-201ENST00000402326 E9PCH4 1651 aa0.69□□□□□ -2.3
CBX3P9-201ENST00000402326 CECR2Q9BXF3 1484 aa0.69□□□□□ -2.3
CBX3P9-201ENST00000402326 TNRC6AQ8NDV7 1962 aaKnown RBP0.69□□□□□ -2.3
CBX3P9-201ENST00000402326 TRAV27A0A087WT01 109 aa0.69□□□□□ -2.3
CBX3P9-201ENST00000402326 KPNA4O00629 521 aaPredicted RBP0.69□□□□□ -2.3
CBX3P9-201ENST00000402326 BCL2P10415 239 aa0.69□□□□□ -2.3
CBX3P9-201ENST00000402326 RPL7P18124 248 aaKnown RBP0.69□□□□□ -2.3
CBX3P9-201ENST00000402326 TFAMQ00059 246 aaKnown RBP0.69□□□□□ -2.3
CBX3P9-201ENST00000402326 TEN1Q86WV5 123 aa0.69□□□□□ -2.3
CBX3P9-201ENST00000402326 OR5AS1Q8N127 324 aa0.69□□□□□ -2.3
CBX3P9-201ENST00000402326 TEX29Q8N6K0 151 aa0.69□□□□□ -2.3
CBX3P9-201ENST00000402326 LINC00526Q96FQ7 95 aa0.69□□□□□ -2.3
CBX3P9-201ENST00000402326 NIT2Q9NQR4 276 aa0.69□□□□□ -2.3
CBX3P9-201ENST00000402326 LAMTOR3Q9UHA4 124 aa0.69□□□□□ -2.3
CBX3P9-201ENST00000402326 TRAPPC2LQ9UL33 140 aa0.69□□□□□ -2.3
CBX3P9-201ENST00000402326 NDUFAF1Q9Y375 327 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms