RNA–Protein interactions for RNA: ENST00000399953.7

NPRL3-201, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 1 (best) BASIC

Gene NPRL3, Length 2,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-201ENST00000399953 ALKBH6Q3KRA9 238 aa13.22□□□□□ -0.29
NPRL3-201ENST00000399953 ANXA2RQ3ZCQ2 193 aa13.22□□□□□ -0.29
NPRL3-201ENST00000399953 MAPKAPK5-AS1Q8N8E1 139 aa13.22□□□□□ -0.29
NPRL3-201ENST00000399953 FSCN3Q9NQT6 498 aa13.22□□□□□ -0.29
NPRL3-201ENST00000399953 HOXA3O43365 443 aaPredicted RBP13.21□□□□□ -0.29
NPRL3-201ENST00000399953 PTH2Q96A98 100 aa13.21□□□□□ -0.29
NPRL3-201ENST00000399953 FAM173AQ9BQD7 235 aa13.21□□□□□ -0.29
NPRL3-201ENST00000399953 TRBV7-3A0A075B6L6 115 aa13.21□□□□□ -0.29
NPRL3-201ENST00000399953 TWIST1Q15672 202 aa13.21□□□□□ -0.29
NPRL3-201ENST00000399953 NPIPB3Q92617 1050 aa13.21□□□□□ -0.29
NPRL3-201ENST00000399953 GAGE2BQ13066 116 aa13.2□□□□□ -0.3
NPRL3-201ENST00000399953 MRPL51Q4U2R6 128 aaKnown RBP13.2□□□□□ -0.3
NPRL3-201ENST00000399953 GAGE2EQ4V326 116 aa13.2□□□□□ -0.3
NPRL3-201ENST00000399953 C11orf53Q8IXP5 236 aa13.2□□□□□ -0.3
NPRL3-201ENST00000399953 GAGE2DQ9UEU5 116 aa13.2□□□□□ -0.3
NPRL3-201ENST00000399953 IGKV1D-37A0A075B6S9 117 aa13.2□□□□□ -0.3
NPRL3-201ENST00000399953 IGHV1-45A0A0A0MS14 117 aa13.2□□□□□ -0.3
NPRL3-201ENST00000399953 A0A1W2PQM1 296 aa13.2□□□□□ -0.3
NPRL3-201ENST00000399953 A0A1W2PR77 199 aa13.2□□□□□ -0.3
NPRL3-201ENST00000399953 TMEM8BA6NDV4 472 aa13.2□□□□□ -0.3
NPRL3-201ENST00000399953 SAA2P0DJI9 122 aaPredicted RBP13.2□□□□□ -0.3
NPRL3-201ENST00000399953 ORM2P19652 201 aa13.2□□□□□ -0.3
NPRL3-201ENST00000399953 PSMB2P49721 201 aa13.2□□□□□ -0.3
NPRL3-201ENST00000399953 OBP2BQ9NPH6 170 aa13.2□□□□□ -0.3
NPRL3-201ENST00000399953 SPANXA1Q9NS26 97 aa13.2□□□□□ -0.3
NPRL3-201ENST00000399953 IGLV2-11P01706 119 aa13.2□□□□□ -0.3
NPRL3-201ENST00000399953 ERHP84090 104 aaKnown RBP13.2□□□□□ -0.3
NPRL3-201ENST00000399953 FZR1Q9UM11 496 aa13.2□□□□□ -0.3
NPRL3-201ENST00000399953 CENPVL3A0A0U1RRI6 287 aa13.19□□□□□ -0.3
NPRL3-201ENST00000399953 ZNF785A8K8V0 405 aa13.19□□□□□ -0.3
NPRL3-201ENST00000399953 H3BTX0 84 aa13.19□□□□□ -0.3
NPRL3-201ENST00000399953 NPYP01303 97 aa13.19□□□□□ -0.3
NPRL3-201ENST00000399953 Q71RC1 249 aaPredicted RBP13.19□□□□□ -0.3
NPRL3-201ENST00000399953 THAP8Q8NA92 274 aa13.19□□□□□ -0.3
NPRL3-201ENST00000399953 PPP1R35Q8TAP8 253 aa13.19□□□□□ -0.3
NPRL3-201ENST00000399953 IMMP1LQ96LU5 166 aa13.19□□□□□ -0.3
NPRL3-201ENST00000399953 KIR2DL4Q99706 377 aa13.19□□□□□ -0.3
NPRL3-201ENST00000399953 LINC01619G3V211 115 aa13.19□□□□□ -0.3
NPRL3-201ENST00000399953 TBC1D28Q2M2D7 210 aa13.19□□□□□ -0.3
NPRL3-201ENST00000399953 LINC01559Q495D7 138 aa13.19□□□□□ -0.3
NPRL3-201ENST00000399953 FOXC2Q99958 501 aa13.19□□□□□ -0.3
NPRL3-201ENST00000399953 MAP1LC3AQ9H492 121 aa13.19□□□□□ -0.3
NPRL3-201ENST00000399953 TRBV20-1A0A075B6N2 111 aa13.18□□□□□ -0.3
NPRL3-201ENST00000399953 TMEM213A2RRL7 107 aa13.18□□□□□ -0.3
NPRL3-201ENST00000399953 IQCF6A8MYZ5 107 aa13.18□□□□□ -0.3
NPRL3-201ENST00000399953 ATP5LO75964 103 aa13.18□□□□□ -0.3
NPRL3-201ENST00000399953 GP9P14770 177 aa13.18□□□□□ -0.3
NPRL3-201ENST00000399953 IGFBP4P22692 258 aa13.18□□□□□ -0.3
NPRL3-201ENST00000399953 CKS2P33552 79 aa13.18□□□□□ -0.3
NPRL3-201ENST00000399953 TTC32Q5I0X7 151 aa13.18□□□□□ -0.3
NPRL3-201ENST00000399953 MRPL14Q6P1L8 145 aaKnown RBP13.18□□□□□ -0.3
NPRL3-201ENST00000399953 GOLT1AQ6ZVE7 132 aa13.18□□□□□ -0.3
NPRL3-201ENST00000399953 MDP1Q86V88 176 aa13.18□□□□□ -0.3
NPRL3-201ENST00000399953 AKIRIN1Q9H9L7 192 aaPredicted RBP13.18□□□□□ -0.3
NPRL3-201ENST00000399953 OTORQ9NRC9 128 aa13.18□□□□□ -0.3
NPRL3-201ENST00000399953 TRBV6-1A0A0K0K1D8 114 aa13.18□□□□□ -0.3
NPRL3-201ENST00000399953 IFITM1P13164 125 aa13.17□□□□□ -0.3
NPRL3-201ENST00000399953 PRTN3P24158 256 aa13.17□□□□□ -0.3
NPRL3-201ENST00000399953 ID1P41134 155 aa13.17□□□□□ -0.3
NPRL3-201ENST00000399953 CD177Q8N6Q3 437 aa13.17□□□□□ -0.3
NPRL3-201ENST00000399953 LEPP41159 167 aa13.17□□□□□ -0.3
NPRL3-201ENST00000399953 LEAP2Q969E1 77 aa13.17□□□□□ -0.3
NPRL3-201ENST00000399953 FBXL15Q9H469 300 aa13.17□□□□□ -0.3
NPRL3-201ENST00000399953 COX6A1P12074 109 aa13.16□□□□□ -0.3
NPRL3-201ENST00000399953 HOXB4P17483 251 aaPredicted RBP13.16□□□□□ -0.3
NPRL3-201ENST00000399953 PEAR1Q5VY43 1037 aaPredicted RBP13.16□□□□□ -0.3
NPRL3-201ENST00000399953 RPEQ96AT9 228 aa13.16□□□□□ -0.3
NPRL3-201ENST00000399953 TMEM160Q9NX00 188 aa13.16□□□□□ -0.3
NPRL3-201ENST00000399953 SNCGO76070 127 aa13.16□□□□□ -0.3
NPRL3-201ENST00000399953 IGHV3-48P01763 117 aa13.16□□□□□ -0.3
NPRL3-201ENST00000399953 LYRM7Q5U5X0 104 aa13.16□□□□□ -0.3
NPRL3-201ENST00000399953 LOC107984156A0A0G2JMH3 177 aa13.15□□□□□ -0.3
NPRL3-201ENST00000399953 SMKR1H3BMG3 65 aa13.15□□□□□ -0.3
NPRL3-201ENST00000399953 LYZL1Q6UWQ5 148 aa13.15□□□□□ -0.3
NPRL3-201ENST00000399953 ARL17AQ8IVW1 177 aa13.15□□□□□ -0.3
NPRL3-201ENST00000399953 ZCCHC24Q8N2G6 241 aaKnown RBP13.15□□□□□ -0.3
NPRL3-201ENST00000399953 TRAV40A0A0B4J280 105 aa13.15□□□□□ -0.3
NPRL3-201ENST00000399953 NCBP2LA6PVI3 153 aaKnown RBP13.15□□□□□ -0.3
NPRL3-201ENST00000399953 A8MWV9 139 aa13.15□□□□□ -0.3
NPRL3-201ENST00000399953 PRDX2P32119 198 aa13.15□□□□□ -0.3
NPRL3-201ENST00000399953 UTF1Q5T230 341 aa13.15□□□□□ -0.3
NPRL3-201ENST00000399953 MBNL2Q5VZF2 373 aaKnown RBP13.15□□□□□ -0.3
NPRL3-201ENST00000399953 PIP4P1Q86T03 277 aa13.15□□□□□ -0.3
NPRL3-201ENST00000399953 AJUBAQ96IF1 538 aa13.15□□□□□ -0.3
NPRL3-201ENST00000399953 DOCK7Q96N67 2140 aa13.15□□□□□ -0.3
NPRL3-201ENST00000399953 VPREB3Q9UKI3 123 aa13.15□□□□□ -0.3
NPRL3-201ENST00000399953 CXXC4Q9H2H0 198 aa13.15□□□□□ -0.31
NPRL3-201ENST00000399953 NDUFA4L2Q9NRX3 87 aa13.15□□□□□ -0.31
NPRL3-201ENST00000399953 LINC01546A6NGU7 62 aa13.14□□□□□ -0.31
NPRL3-201ENST00000399953 LINC01548A6NM66 108 aa13.14□□□□□ -0.31
NPRL3-201ENST00000399953 LAMA5O15230 3695 aa13.14□□□□□ -0.31
NPRL3-201ENST00000399953 FCN3O75636 299 aa13.14□□□□□ -0.31
NPRL3-201ENST00000399953 SAA1P0DJI8 122 aaPredicted RBP13.14□□□□□ -0.31
NPRL3-201ENST00000399953 SBSPONQ8IVN8 264 aa13.14□□□□□ -0.31
NPRL3-201ENST00000399953 CALYQ9NYX4 217 aa13.14□□□□□ -0.31
NPRL3-201ENST00000399953 MRPL36Q9P0J6 103 aaKnown RBP13.14□□□□□ -0.31
NPRL3-201ENST00000399953 SSUH2Q9Y2M2 353 aa13.14□□□□□ -0.31
NPRL3-201ENST00000399953 ZDBF2Q9HCK1 2354 aa13.13□□□□□ -0.31
NPRL3-201ENST00000399953 MYMXA0A1B0GTQ4 84 aa13.13□□□□□ -0.31
NPRL3-201ENST00000399953 LINC01549A6NIU2 74 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms