RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 FOXI2Q6ZQN5 318 aa13.04□□□□□ -0.32
CTNS-203ENST00000399306 STHQ8IWL8 128 aa13.04□□□□□ -0.32
CTNS-203ENST00000399306 SAT2Q96F10 170 aaPredicted RBP13.04□□□□□ -0.32
CTNS-203ENST00000399306 SLC25A2Q9BXI2 301 aa13.04□□□□□ -0.32
CTNS-203ENST00000399306 ZMAT4Q9H898 229 aa13.04□□□□□ -0.32
CTNS-203ENST00000399306 ZNF331Q9NQX6 463 aaPredicted RBP13.04□□□□□ -0.32
CTNS-203ENST00000399306 AGRNO00468 2067 aa13.04□□□□□ -0.32
CTNS-203ENST00000399306 COL7A1Q02388 2944 aa13.03□□□□□ -0.32
CTNS-203ENST00000399306 TRAV8-2A0A0B4J237 113 aa13.03□□□□□ -0.32
CTNS-203ENST00000399306 TRAV5A0A0B4J249 113 aa13.03□□□□□ -0.32
CTNS-203ENST00000399306 KANTRA0A1W2PQU2 76 aa13.03□□□□□ -0.32
CTNS-203ENST00000399306 BCL2L11O43521 198 aa13.03□□□□□ -0.32
CTNS-203ENST00000399306 SPP1P10451 314 aa13.03□□□□□ -0.32
CTNS-203ENST00000399306 HLA-DRB4P13762 266 aa13.03□□□□□ -0.32
CTNS-203ENST00000399306 KHDC3LQ587J8 217 aa13.03□□□□□ -0.32
CTNS-203ENST00000399306 MORN3Q6PF18 240 aaPredicted RBP13.03□□□□□ -0.32
CTNS-203ENST00000399306 Q6ZWC4 215 aa13.03□□□□□ -0.32
CTNS-203ENST00000399306 MIR17HGQ75NE6 70 aa13.03□□□□□ -0.32
CTNS-203ENST00000399306 TRPT1Q86TN4 253 aaKnown RBP13.03□□□□□ -0.32
CTNS-203ENST00000399306 LRRC20Q8TCA0 184 aa13.03□□□□□ -0.32
CTNS-203ENST00000399306 SPATA25Q9BR10 227 aa13.03□□□□□ -0.32
CTNS-203ENST00000399306 SAV1Q9H4B6 383 aaPredicted RBP13.03□□□□□ -0.32
CTNS-203ENST00000399306 HLA-DRB4X5D2U9 266 aa13.03□□□□□ -0.32
CTNS-203ENST00000399306 TRBV19A0A075B6N1 114 aa13.02□□□□□ -0.33
CTNS-203ENST00000399306 A0A1W2PPV4 95 aa13.02□□□□□ -0.33
CTNS-203ENST00000399306 H3BQ15 152 aa13.02□□□□□ -0.33
CTNS-203ENST00000399306 ZNF124Q15973 351 aa13.02□□□□□ -0.33
CTNS-203ENST00000399306 PSG3Q16557 428 aa13.02□□□□□ -0.33
CTNS-203ENST00000399306 PQLC2Q6ZP29 291 aa13.02□□□□□ -0.33
CTNS-203ENST00000399306 OR10G4Q8NGN3 311 aa13.02□□□□□ -0.33
CTNS-203ENST00000399306 OR10G9Q8NGN4 311 aa13.02□□□□□ -0.33
CTNS-203ENST00000399306 OR10G7Q8NGN6 311 aa13.02□□□□□ -0.33
CTNS-203ENST00000399306 LINC00052Q96N35 136 aa13.02□□□□□ -0.33
CTNS-203ENST00000399306 OR51M1Q9H341 326 aa13.02□□□□□ -0.33
CTNS-203ENST00000399306 TP53TG1Q9Y2A0 90 aa13.02□□□□□ -0.33
CTNS-203ENST00000399306 A8MTW9 85 aa13.01□□□□□ -0.33
CTNS-203ENST00000399306 H3BMM0 161 aa13.01□□□□□ -0.33
CTNS-203ENST00000399306 PSG9Q00887 426 aa13.01□□□□□ -0.33
CTNS-203ENST00000399306 EBLN2Q6P2I7 272 aa13.01□□□□□ -0.33
CTNS-203ENST00000399306 TMUB2Q71RG4 321 aa13.01□□□□□ -0.33
CTNS-203ENST00000399306 MRPL53Q96EL3 112 aaKnown RBP13.01□□□□□ -0.33
CTNS-203ENST00000399306 ASCL2Q99929 193 aa13.01□□□□□ -0.33
CTNS-203ENST00000399306 PAXXQ9BUH6 204 aa13.01□□□□□ -0.33
CTNS-203ENST00000399306 CSTL1Q9H114 145 aa13.01□□□□□ -0.33
CTNS-203ENST00000399306 ZNF586Q9NXT0 402 aa13.01□□□□□ -0.33
CTNS-203ENST00000399306 PRELID1Q9Y255 219 aa13.01□□□□□ -0.33
CTNS-203ENST00000399306 HUWE1Q7Z6Z7 4374 aaKnown RBP13.01□□□□□ -0.33
CTNS-203ENST00000399306 A0A0J9YX75 114 aa13□□□□□ -0.33
CTNS-203ENST00000399306 NBEAP1P0C6P0 100 aa13□□□□□ -0.33
CTNS-203ENST00000399306 SEC11BP0C7V7 166 aa13□□□□□ -0.33
CTNS-203ENST00000399306 RAB2AP61019 212 aa13□□□□□ -0.33
CTNS-203ENST00000399306 NUTF2P61970 127 aaKnown RBP13□□□□□ -0.33
CTNS-203ENST00000399306 ACTL10Q5JWF8 245 aa13□□□□□ -0.33
CTNS-203ENST00000399306 LYPD1Q8N2G4 141 aa13□□□□□ -0.33
CTNS-203ENST00000399306 RPP25LQ8N5L8 163 aaKnown RBP13□□□□□ -0.33
CTNS-203ENST00000399306 RNF141Q8WVD5 230 aa13□□□□□ -0.33
CTNS-203ENST00000399306 C20orf173Q96LM9 149 aa13□□□□□ -0.33
CTNS-203ENST00000399306 SH3BGRL3Q9H299 93 aa13□□□□□ -0.33
CTNS-203ENST00000399306 RFNGQ9Y644 331 aa13□□□□□ -0.33
CTNS-203ENST00000399306 A0A1B0GVG6 124 aa12.99□□□□□ -0.33
CTNS-203ENST00000399306 KNCNA6PVL3 124 aa12.99□□□□□ -0.33
CTNS-203ENST00000399306 OR7C2O60412 319 aa12.99□□□□□ -0.33
CTNS-203ENST00000399306 PFDN1O60925 122 aa12.99□□□□□ -0.33
CTNS-203ENST00000399306 CDC34P49427 236 aaPredicted RBP12.99□□□□□ -0.33
CTNS-203ENST00000399306 STOML3Q8TAV4 291 aa12.99□□□□□ -0.33
CTNS-203ENST00000399306 FXYD5Q96DB9 178 aa12.99□□□□□ -0.33
CTNS-203ENST00000399306 DUSP14O95147 198 aaKnown RBP12.98□□□□□ -0.33
CTNS-203ENST00000399306 STAG3L2P0CL84 134 aa12.98□□□□□ -0.33
CTNS-203ENST00000399306 STAG3L3P0CL85 134 aa12.98□□□□□ -0.33
CTNS-203ENST00000399306 PYYP10082 97 aa12.98□□□□□ -0.33
CTNS-203ENST00000399306 RPL35AP18077 110 aaKnown RBP12.98□□□□□ -0.33
CTNS-203ENST00000399306 C4BPBP20851 252 aa12.98□□□□□ -0.33
CTNS-203ENST00000399306 LGALSLQ3ZCW2 172 aaPredicted RBP12.98□□□□□ -0.33
CTNS-203ENST00000399306 ZNF503Q96F45 646 aa12.98□□□□□ -0.33
CTNS-203ENST00000399306 ZNF471Q9BX82 626 aaPredicted RBP12.98□□□□□ -0.33
CTNS-203ENST00000399306 ACTR3CQ9C0K3 210 aaPredicted RBP12.98□□□□□ -0.33
CTNS-203ENST00000399306 NBEAL2Q6ZNJ1 2754 aa12.98□□□□□ -0.33
CTNS-203ENST00000399306 UMAD1C9J7I0 102 aa12.97□□□□□ -0.33
CTNS-203ENST00000399306 SLC17A3O00476 420 aa12.97□□□□□ -0.33
CTNS-203ENST00000399306 NDUFB4O95168 129 aa12.97□□□□□ -0.33
CTNS-203ENST00000399306 TPT1P13693 172 aaKnown RBP12.97□□□□□ -0.33
CTNS-203ENST00000399306 ZFP69Q49AA0 526 aa12.97□□□□□ -0.33
CTNS-203ENST00000399306 AKR1C8PQ5T2L2 129 aa12.97□□□□□ -0.33
CTNS-203ENST00000399306 FAM122CQ6P4D5 195 aa12.97□□□□□ -0.33
CTNS-203ENST00000399306 BAP18Q8IXM2 172 aa12.97□□□□□ -0.33
CTNS-203ENST00000399306 ZNF738Q8NE65 137 aa12.97□□□□□ -0.33
CTNS-203ENST00000399306 RAB24Q969Q5 203 aa12.97□□□□□ -0.33
CTNS-203ENST00000399306 C1QTNF4Q9BXJ3 329 aa12.97□□□□□ -0.33
CTNS-203ENST00000399306 AAMDCQ9H7C9 122 aa12.97□□□□□ -0.33
CTNS-203ENST00000399306 UBE2L3P68036 154 aaKnown RBP12.96□□□□□ -0.33
CTNS-203ENST00000399306 RNF182Q8N6D2 247 aa12.96□□□□□ -0.33
CTNS-203ENST00000399306 ARL6IP6Q8N6S5 226 aa12.96□□□□□ -0.33
CTNS-203ENST00000399306 SUN5Q8TC36 379 aa12.96□□□□□ -0.33
CTNS-203ENST00000399306 RPUSD4Q96CM3 377 aaKnown RBP12.96□□□□□ -0.33
CTNS-203ENST00000399306 RNF183Q96D59 192 aa12.96□□□□□ -0.33
CTNS-203ENST00000399306 U3KQK5 164 aa12.96□□□□□ -0.33
CTNS-203ENST00000399306 STAB2Q8WWQ8 2551 aa12.96□□□□□ -0.34
CTNS-203ENST00000399306 CTXND1A0A1B0GTU2 59 aa12.95□□□□□ -0.34
CTNS-203ENST00000399306 GDF5OSQ5U4N7 250 aa12.95□□□□□ -0.34
CTNS-203ENST00000399306 EIF5AL1Q6IS14 154 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms