RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 PVRIGQ6DKI7 326 aa11.07□□□□□ -0.64
APOB-202ENST00000399256 OR2K2Q8NGT1 345 aa11.07□□□□□ -0.64
APOB-202ENST00000399256 TMEM133Q9H2Q1 129 aa11.07□□□□□ -0.64
APOB-202ENST00000399256 TMEM14CQ9P0S9 112 aa11.07□□□□□ -0.64
APOB-202ENST00000399256 G3V4G9 280 aa11.07□□□□□ -0.64
APOB-202ENST00000399256 CD40P25942 277 aa11.07□□□□□ -0.64
APOB-202ENST00000399256 MC5RP33032 325 aa11.07□□□□□ -0.64
APOB-202ENST00000399256 HSD52Q0P140 79 aa11.07□□□□□ -0.64
APOB-202ENST00000399256 PCP2Q8IVA1 136 aa11.07□□□□□ -0.64
APOB-202ENST00000399256 CCL17Q92583 94 aa11.07□□□□□ -0.64
APOB-202ENST00000399256 PRELID3AQ96N28 172 aa11.07□□□□□ -0.64
APOB-202ENST00000399256 RASL11BQ9BPW5 248 aa11.07□□□□□ -0.64
APOB-202ENST00000399256 RP1L1Q8IWN7 2480 aaPredicted RBP11.06□□□□□ -0.64
APOB-202ENST00000399256 M0R3E3 92 aa11.06□□□□□ -0.64
APOB-202ENST00000399256 LGALS7P47929 136 aa11.06□□□□□ -0.64
APOB-202ENST00000399256 LYZL1Q6UWQ5 148 aa11.06□□□□□ -0.64
APOB-202ENST00000399256 TMEM75Q8N9X5 138 aa11.06□□□□□ -0.64
APOB-202ENST00000399256 GATD1Q8NB37 220 aa11.06□□□□□ -0.64
APOB-202ENST00000399256 NGBQ9NPG2 151 aa11.06□□□□□ -0.64
APOB-202ENST00000399256 TRBV19A0A075B6N1 114 aa11.06□□□□□ -0.64
APOB-202ENST00000399256 NDUFB3O43676 98 aa11.06□□□□□ -0.64
APOB-202ENST00000399256 LGALS9BQ3B8N2 356 aa11.06□□□□□ -0.64
APOB-202ENST00000399256 LGALS9CQ6DKI2 356 aa11.06□□□□□ -0.64
APOB-202ENST00000399256 LINC00311Q8N616 119 aa11.06□□□□□ -0.64
APOB-202ENST00000399256 OR1N2Q8NGR9 330 aa11.06□□□□□ -0.64
APOB-202ENST00000399256 FAM215AQ9Y5M1 114 aa11.06□□□□□ -0.64
APOB-202ENST00000399256 PPIAL4EA0A075B759 164 aa11.05□□□□□ -0.64
APOB-202ENST00000399256 A0A1W2PRD5 423 aa11.05□□□□□ -0.64
APOB-202ENST00000399256 A0A1W2PRF3 423 aa11.05□□□□□ -0.64
APOB-202ENST00000399256 A0A1W2PRM7 423 aa11.05□□□□□ -0.64
APOB-202ENST00000399256 SMKR1H3BMG3 65 aa11.05□□□□□ -0.64
APOB-202ENST00000399256 PPIAL4FP0DN26 164 aa11.05□□□□□ -0.64
APOB-202ENST00000399256 PSG3Q16557 428 aa11.05□□□□□ -0.64
APOB-202ENST00000399256 ADAMTSL5Q6ZMM2 481 aa11.05□□□□□ -0.64
APOB-202ENST00000399256 DPF1Q92782 380 aa11.05□□□□□ -0.64
APOB-202ENST00000399256 ZNF414Q96IQ9 312 aa11.05□□□□□ -0.64
APOB-202ENST00000399256 CTSZQ9UBR2 303 aa11.05□□□□□ -0.64
APOB-202ENST00000399256 INSIG2Q9Y5U4 225 aa11.05□□□□□ -0.64
APOB-202ENST00000399256 SPCS1Q9Y6A9 102 aa11.05□□□□□ -0.64
APOB-202ENST00000399256 A0A1B0GW15 77 aa11.04□□□□□ -0.64
APOB-202ENST00000399256 FOXC1Q12948 553 aa11.04□□□□□ -0.64
APOB-202ENST00000399256 SIGLEC15Q6ZMC9 328 aa11.04□□□□□ -0.64
APOB-202ENST00000399256 SIGLEC9Q9Y336 463 aa11.04□□□□□ -0.64
APOB-202ENST00000399256 TRBV6-1A0A0K0K1D8 114 aa11.04□□□□□ -0.64
APOB-202ENST00000399256 TEX22C9J3V5 150 aa11.04□□□□□ -0.64
APOB-202ENST00000399256 K7EQM0 130 aa11.04□□□□□ -0.64
APOB-202ENST00000399256 IGFL2Q6UWQ7 119 aa11.04□□□□□ -0.64
APOB-202ENST00000399256 OR9G4Q8NGQ1 327 aa11.04□□□□□ -0.64
APOB-202ENST00000399256 JKAMPQ9P055 326 aa11.04□□□□□ -0.64
APOB-202ENST00000399256 SPTBN2O15020 2390 aa11.04□□□□□ -0.64
APOB-202ENST00000399256 C17orf100A8MU93 164 aa11.04□□□□□ -0.64
APOB-202ENST00000399256 ORMDL3Q8N138 153 aa11.04□□□□□ -0.64
APOB-202ENST00000399256 SCNM1Q9BWG6 230 aa11.04□□□□□ -0.64
APOB-202ENST00000399256 FBXL15Q9H469 300 aa11.04□□□□□ -0.64
APOB-202ENST00000399256 A0A1W2PPM0 123 aa11.03□□□□□ -0.64
APOB-202ENST00000399256 IGKV1-17P01599 117 aa11.03□□□□□ -0.64
APOB-202ENST00000399256 HBDP02042 147 aa11.03□□□□□ -0.64
APOB-202ENST00000399256 LOXP28300 417 aaPredicted RBP11.03□□□□□ -0.64
APOB-202ENST00000399256 FAM104BQ5XKR9 115 aa11.03□□□□□ -0.64
APOB-202ENST00000399256 ZNF493Q6ZR52 646 aa11.03□□□□□ -0.64
APOB-202ENST00000399256 IFI27L1Q96BM0 104 aa11.03□□□□□ -0.64
APOB-202ENST00000399256 DKK2Q9UBU2 259 aa11.03□□□□□ -0.64
APOB-202ENST00000399256 TMEM178BH3BS89 294 aa11.03□□□□□ -0.64
APOB-202ENST00000399256 CT45A10P0DMU9 189 aa11.03□□□□□ -0.64
APOB-202ENST00000399256 IGHV1-8P0DP01 117 aa11.03□□□□□ -0.64
APOB-202ENST00000399256 DEFB109BQ30KR1 87 aa11.03□□□□□ -0.64
APOB-202ENST00000399256 C3orf36Q3SXR2 165 aa11.03□□□□□ -0.64
APOB-202ENST00000399256 MRPL51Q4U2R6 128 aaKnown RBP11.03□□□□□ -0.64
APOB-202ENST00000399256 NEGR1Q7Z3B1 354 aa11.03□□□□□ -0.64
APOB-202ENST00000399256 ABHD17AQ96GS6 310 aa11.03□□□□□ -0.64
APOB-202ENST00000399256 I3L2K1 104 aa11.02□□□□□ -0.64
APOB-202ENST00000399256 CRYGBP07316 175 aa11.02□□□□□ -0.64
APOB-202ENST00000399256 DLX6P56179 175 aa11.02□□□□□ -0.64
APOB-202ENST00000399256 Q6AWC8 147 aa11.02□□□□□ -0.64
APOB-202ENST00000399256 OR4X2Q8NGF9 303 aa11.02□□□□□ -0.64
APOB-202ENST00000399256 C18orf15Q96N68 181 aa11.02□□□□□ -0.64
APOB-202ENST00000399256 SHANK2-AS3Q9BTD1 123 aa11.02□□□□□ -0.64
APOB-202ENST00000399256 S4R3C0 116 aa11.02□□□□□ -0.64
APOB-202ENST00000399256 TMEM189A5PLL7 270 aa11.02□□□□□ -0.65
APOB-202ENST00000399256 ADIPOQQ15848 244 aa11.02□□□□□ -0.65
APOB-202ENST00000399256 PPP1R27Q86WC6 154 aa11.02□□□□□ -0.65
APOB-202ENST00000399256 U3KQK5 164 aa11.02□□□□□ -0.65
APOB-202ENST00000399256 NPYP01303 97 aa11.02□□□□□ -0.65
APOB-202ENST00000399256 RBPJQ06330 500 aa11.02□□□□□ -0.65
APOB-202ENST00000399256 C8orf31Q8N9H6 132 aa11.02□□□□□ -0.65
APOB-202ENST00000399256 NPFFR1Q9GZQ6 430 aa11.02□□□□□ -0.65
APOB-202ENST00000399256 H3BRN7 92 aa11.01□□□□□ -0.65
APOB-202ENST00000399256 TTTY13Q9BZ97 58 aa11.01□□□□□ -0.65
APOB-202ENST00000399256 SH2D1AO60880 128 aa11.01□□□□□ -0.65
APOB-202ENST00000399256 NDUFS7O75251 213 aa11.01□□□□□ -0.65
APOB-202ENST00000399256 FCGR2BP31994 310 aaPredicted RBP11.01□□□□□ -0.65
APOB-202ENST00000399256 TMEM155Q4W5P6 130 aa11.01□□□□□ -0.65
APOB-202ENST00000399256 BCL6BQ8N143 479 aaPredicted RBP11.01□□□□□ -0.65
APOB-202ENST00000399256 IL4P05112 153 aa11□□□□□ -0.65
APOB-202ENST00000399256 GCSHP23434 173 aa11□□□□□ -0.65
APOB-202ENST00000399256 CKS2P33552 79 aa11□□□□□ -0.65
APOB-202ENST00000399256 PLGLAQ15195 96 aa11□□□□□ -0.65
APOB-202ENST00000399256 KALRNO60229 2985 aa11□□□□□ -0.65
APOB-202ENST00000399256 SIVA1O15304 175 aa11□□□□□ -0.65
APOB-202ENST00000399256 PAX8Q06710 450 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms