RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 OR4F5Q8NH21 305 aa11.91□□□□□ -0.5
COL25A1-201ENST00000399126 ZNF503Q96F45 646 aa11.91□□□□□ -0.5
COL25A1-201ENST00000399126 OR4F4Q96R69 305 aa11.91□□□□□ -0.5
COL25A1-201ENST00000399126 SONP18583 2426 aaKnown RBP11.9□□□□□ -0.5
COL25A1-201ENST00000399126 SCGB1A1P11684 91 aa11.9□□□□□ -0.5
COL25A1-201ENST00000399126 PNRC1Q12796 327 aaPredicted RBP11.9□□□□□ -0.5
COL25A1-201ENST00000399126 VAMP3Q15836 100 aa11.9□□□□□ -0.5
COL25A1-201ENST00000399126 COX19Q49B96 90 aa11.9□□□□□ -0.5
COL25A1-201ENST00000399126 OR51G1Q8NGK1 321 aa11.9□□□□□ -0.5
COL25A1-201ENST00000399126 FANCD2OSQ96PS1 177 aa11.9□□□□□ -0.5
COL25A1-201ENST00000399126 CXorf1O96002 111 aa11.9□□□□□ -0.5
COL25A1-201ENST00000399126 GCHFRP30047 84 aa11.9□□□□□ -0.5
COL25A1-201ENST00000399126 RASL11BQ9BPW5 248 aa11.9□□□□□ -0.5
COL25A1-201ENST00000399126 LOC102724200A0A096LPH7 203 aaPredicted RBP11.89□□□□□ -0.51
COL25A1-201ENST00000399126 MDFIC2A0A1B0GVS7 189 aa11.89□□□□□ -0.51
COL25A1-201ENST00000399126 C11orf94C9JXX5 98 aa11.89□□□□□ -0.51
COL25A1-201ENST00000399126 CORTO00230 105 aa11.89□□□□□ -0.51
COL25A1-201ENST00000399126 HLA-DRB1P01911 266 aa11.89□□□□□ -0.51
COL25A1-201ENST00000399126 TIRAPP58753 221 aa11.89□□□□□ -0.51
COL25A1-201ENST00000399126 LY6EQ16553 131 aa11.89□□□□□ -0.51
COL25A1-201ENST00000399126 PSMG3-AS1Q96PY0 264 aa11.89□□□□□ -0.51
COL25A1-201ENST00000399126 IMMP2LQ96T52 175 aa11.89□□□□□ -0.51
COL25A1-201ENST00000399126 CTDSP1Q9GZU7 261 aa11.89□□□□□ -0.51
COL25A1-201ENST00000399126 MANBALQ9NQG1 85 aa11.89□□□□□ -0.51
COL25A1-201ENST00000399126 C1RLQ9NZP8 487 aa11.89□□□□□ -0.51
COL25A1-201ENST00000399126 YTHDF2Q9Y5A9 579 aaKnown RBP11.89□□□□□ -0.51
COL25A1-201ENST00000399126 ATP6V0E1O15342 81 aa11.89□□□□□ -0.51
COL25A1-201ENST00000399126 OR10J4P0C629 311 aa11.89□□□□□ -0.51
COL25A1-201ENST00000399126 NPPCP23582 126 aa11.89□□□□□ -0.51
COL25A1-201ENST00000399126 LINC01356Q8N9X3 169 aa11.89□□□□□ -0.51
COL25A1-201ENST00000399126 UQCR10Q9UDW1 63 aa11.89□□□□□ -0.51
COL25A1-201ENST00000399126 AMY1AP04745 511 aa11.88□□□□□ -0.51
COL25A1-201ENST00000399126 IGLC1P0CG04 106 aa11.88□□□□□ -0.51
COL25A1-201ENST00000399126 ORM2P19652 201 aa11.88□□□□□ -0.51
COL25A1-201ENST00000399126 PSG3Q16557 428 aa11.88□□□□□ -0.51
COL25A1-201ENST00000399126 ECSCRQ19T08 205 aa11.88□□□□□ -0.51
COL25A1-201ENST00000399126 Q6ZVH6 145 aa11.88□□□□□ -0.51
COL25A1-201ENST00000399126 KRTAP1-3Q8IUG1 177 aa11.88□□□□□ -0.51
COL25A1-201ENST00000399126 PYGO2Q9BRQ0 406 aa11.88□□□□□ -0.51
COL25A1-201ENST00000399126 ACANP16112 2415 aa11.88□□□□□ -0.51
COL25A1-201ENST00000399126 IGHV3-23P01764 117 aa11.88□□□□□ -0.51
COL25A1-201ENST00000399126 HNRNPA3P51991 378 aaKnown RBP11.88□□□□□ -0.51
COL25A1-201ENST00000399126 TIGITQ495A1 244 aa11.88□□□□□ -0.51
COL25A1-201ENST00000399126 C5orf56Q8N8D9 126 aa11.88□□□□□ -0.51
COL25A1-201ENST00000399126 OR4B1Q8NGF8 309 aa11.88□□□□□ -0.51
COL25A1-201ENST00000399126 IGLV11-55A0A075B6I3 123 aa11.87□□□□□ -0.51
COL25A1-201ENST00000399126 NPIPB5A8MRT5 1133 aa11.87□□□□□ -0.51
COL25A1-201ENST00000399126 G3V318 75 aa11.87□□□□□ -0.51
COL25A1-201ENST00000399126 COX7A2P2O60397 106 aa11.87□□□□□ -0.51
COL25A1-201ENST00000399126 OR7C2O60412 319 aa11.87□□□□□ -0.51
COL25A1-201ENST00000399126 FAM3BP58499 235 aaPredicted RBP11.87□□□□□ -0.51
COL25A1-201ENST00000399126 SEC61GP60059 68 aa11.87□□□□□ -0.51
COL25A1-201ENST00000399126 TTC9CQ8N5M4 171 aa11.87□□□□□ -0.51
COL25A1-201ENST00000399126 Q96MF0 132 aa11.87□□□□□ -0.51
COL25A1-201ENST00000399126 TRGV9Q99603 122 aa11.87□□□□□ -0.51
COL25A1-201ENST00000399126 BEX4Q9NWD9 120 aaPredicted RBP11.87□□□□□ -0.51
COL25A1-201ENST00000399126 H3BUX3 64 aa11.87□□□□□ -0.51
COL25A1-201ENST00000399126 PSG1P11464 419 aa11.87□□□□□ -0.51
COL25A1-201ENST00000399126 BCL6BQ8N143 479 aaPredicted RBP11.87□□□□□ -0.51
COL25A1-201ENST00000399126 OR1B1Q8NGR6 318 aa11.87□□□□□ -0.51
COL25A1-201ENST00000399126 FAM167A-AS1Q96KT0 104 aa11.87□□□□□ -0.51
COL25A1-201ENST00000399126 DERL1Q9BUN8 251 aa11.87□□□□□ -0.51
COL25A1-201ENST00000399126 SLC25A2Q9BXI2 301 aa11.87□□□□□ -0.51
COL25A1-201ENST00000399126 LINC00527Q9UJ94 153 aa11.87□□□□□ -0.51
COL25A1-201ENST00000399126 OR2J3O76001 311 aa11.86□□□□□ -0.51
COL25A1-201ENST00000399126 IGKV1-17P01599 117 aa11.86□□□□□ -0.51
COL25A1-201ENST00000399126 C10orf113Q5VZT2 155 aa11.86□□□□□ -0.51
COL25A1-201ENST00000399126 ZNF355PQ9NSJ1 428 aa11.86□□□□□ -0.51
COL25A1-201ENST00000399126 PYYP10082 97 aa11.86□□□□□ -0.51
COL25A1-201ENST00000399126 NIT1Q86X76 327 aa11.86□□□□□ -0.51
COL25A1-201ENST00000399126 PARLQ9H300 379 aa11.86□□□□□ -0.51
COL25A1-201ENST00000399126 IGHV4-31P0DP07 118 aa11.85□□□□□ -0.51
COL25A1-201ENST00000399126 CNN1P51911 297 aaKnown RBP11.85□□□□□ -0.51
COL25A1-201ENST00000399126 LOXL1Q08397 574 aaPredicted RBP11.85□□□□□ -0.51
COL25A1-201ENST00000399126 ACTL10Q5JWF8 245 aa11.85□□□□□ -0.51
COL25A1-201ENST00000399126 LINC00305Q7Z4B0 112 aa11.85□□□□□ -0.51
COL25A1-201ENST00000399126 SMIM7Q9BQ49 75 aa11.85□□□□□ -0.51
COL25A1-201ENST00000399126 CHRDL1Q9BU40 450 aa11.85□□□□□ -0.51
COL25A1-201ENST00000399126 TECRQ9NZ01 308 aaKnown RBP11.85□□□□□ -0.51
COL25A1-201ENST00000399126 MRPL27Q9P0M9 148 aaKnown RBP11.85□□□□□ -0.51
COL25A1-201ENST00000399126 F8W735 103 aaPredicted RBP11.85□□□□□ -0.51
COL25A1-201ENST00000399126 EDN2P20800 178 aa11.85□□□□□ -0.51
COL25A1-201ENST00000399126 Q6ZN92 141 aa11.85□□□□□ -0.51
COL25A1-201ENST00000399126 OR5AU1Q8NGC0 362 aa11.85□□□□□ -0.51
COL25A1-201ENST00000399126 SGMS2Q8NHU3 365 aa11.85□□□□□ -0.51
COL25A1-201ENST00000399126 CUBNO60494 3623 aa11.85□□□□□ -0.51
COL25A1-201ENST00000399126 C8orf88P0DMB2 117 aa11.84□□□□□ -0.51
COL25A1-201ENST00000399126 MOB4Q9Y3A3 225 aa11.84□□□□□ -0.51
COL25A1-201ENST00000399126 SCO2A0A1W2PP80 73 aa11.83□□□□□ -0.51
COL25A1-201ENST00000399126 TMEM250H0YL14 139 aa11.83□□□□□ -0.51
COL25A1-201ENST00000399126 NDUFB4O95168 129 aa11.83□□□□□ -0.51
COL25A1-201ENST00000399126 GATA3P23771 443 aa11.83□□□□□ -0.51
COL25A1-201ENST00000399126 LYZP61626 148 aa11.83□□□□□ -0.51
COL25A1-201ENST00000399126 LRRC75A-AS1Q8N1F1 130 aa11.83□□□□□ -0.51
COL25A1-201ENST00000399126 C19orf24Q9BVV8 132 aa11.83□□□□□ -0.51
COL25A1-201ENST00000399126 PFN1P07737 140 aaKnown RBP11.83□□□□□ -0.52
COL25A1-201ENST00000399126 Q6ZS46 218 aa11.83□□□□□ -0.52
COL25A1-201ENST00000399126 MRPL32Q9BYC8 188 aaKnown RBP11.83□□□□□ -0.52
COL25A1-201ENST00000399126 OR1L4Q8NGR5 311 aa11.83□□□□□ -0.52
COL25A1-201ENST00000399126 SDF2L1Q9HCN8 221 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms