RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 CCDC144NLQ6NUI1 221 aa11.82□□□□□ -0.52
RPRD1A-202ENST00000399022 MED12LQ86YW9 2145 aa11.82□□□□□ -0.52
RPRD1A-202ENST00000399022 TEX48A0A1B0GUV7 120 aa11.82□□□□□ -0.52
RPRD1A-202ENST00000399022 PMS2P5A8MQ11 134 aa11.82□□□□□ -0.52
RPRD1A-202ENST00000399022 NPIPB5A8MRT5 1133 aa11.82□□□□□ -0.52
RPRD1A-202ENST00000399022 DUX4L9Q6RFH8 374 aaPredicted RBP11.82□□□□□ -0.52
RPRD1A-202ENST00000399022 RNASE6Q93091 150 aaKnown RBP11.82□□□□□ -0.52
RPRD1A-202ENST00000399022 A8MWV9 139 aa11.82□□□□□ -0.52
RPRD1A-202ENST00000399022 CFHR2P36980 270 aa11.82□□□□□ -0.52
RPRD1A-202ENST00000399022 ACACBO00763 2458 aa11.82□□□□□ -0.52
RPRD1A-202ENST00000399022 MBD3L4A6NDZ8 208 aaPredicted RBP11.81□□□□□ -0.52
RPRD1A-202ENST00000399022 MBD3L3A6NE82 208 aaPredicted RBP11.81□□□□□ -0.52
RPRD1A-202ENST00000399022 MBD3L5A6NJ08 208 aaPredicted RBP11.81□□□□□ -0.52
RPRD1A-202ENST00000399022 M0R381 172 aa11.81□□□□□ -0.52
RPRD1A-202ENST00000399022 IGHV3-23P01764 117 aa11.81□□□□□ -0.52
RPRD1A-202ENST00000399022 RNASE2P10153 161 aaKnown RBP11.81□□□□□ -0.52
RPRD1A-202ENST00000399022 ZFAND6Q6FIF0 208 aa11.81□□□□□ -0.52
RPRD1A-202ENST00000399022 FAM231DQ6ZW35 169 aa11.81□□□□□ -0.52
RPRD1A-202ENST00000399022 MBD3L2Q8NHZ7 208 aaPredicted RBP11.81□□□□□ -0.52
RPRD1A-202ENST00000399022 PHLDA3Q9Y5J5 127 aa11.81□□□□□ -0.52
RPRD1A-202ENST00000399022 A0A1W2PNU3 283 aaPredicted RBP11.81□□□□□ -0.52
RPRD1A-202ENST00000399022 GAGE2BQ13066 116 aa11.81□□□□□ -0.52
RPRD1A-202ENST00000399022 GAGE2EQ4V326 116 aa11.81□□□□□ -0.52
RPRD1A-202ENST00000399022 KLF17Q5JT82 389 aaPredicted RBP11.81□□□□□ -0.52
RPRD1A-202ENST00000399022 PLA2G2CQ5R387 149 aa11.81□□□□□ -0.52
RPRD1A-202ENST00000399022 GAGE2DQ9UEU5 116 aa11.81□□□□□ -0.52
RPRD1A-202ENST00000399022 PRRC2CQ9Y520 2896 aaKnown RBP11.81□□□□□ -0.52
RPRD1A-202ENST00000399022 IGKV1-16P04430 117 aa11.81□□□□□ -0.52
RPRD1A-202ENST00000399022 WT1P19544 449 aaPredicted RBP11.81□□□□□ -0.52
RPRD1A-202ENST00000399022 JMJD8Q96S16 334 aa11.81□□□□□ -0.52
RPRD1A-202ENST00000399022 VCX2Q9H322 139 aa11.8□□□□□ -0.52
RPRD1A-202ENST00000399022 IGHV3OR16-10A0A075B7F0 116 aa11.8□□□□□ -0.52
RPRD1A-202ENST00000399022 PRTN3P24158 256 aa11.8□□□□□ -0.52
RPRD1A-202ENST00000399022 UCNP55089 124 aa11.8□□□□□ -0.52
RPRD1A-202ENST00000399022 AMTNQ6UX39 209 aa11.8□□□□□ -0.52
RPRD1A-202ENST00000399022 C8orf46Q8TAG6 207 aa11.8□□□□□ -0.52
RPRD1A-202ENST00000399022 TP73-AS1Q9UF72 201 aa11.8□□□□□ -0.52
RPRD1A-202ENST00000399022 BPTFQ12830 3046 aa11.8□□□□□ -0.52
RPRD1A-202ENST00000399022 ZNF815PA8K554 130 aa11.8□□□□□ -0.52
RPRD1A-202ENST00000399022 IGLC1P0CG04 106 aa11.8□□□□□ -0.52
RPRD1A-202ENST00000399022 Q8NFD4 153 aa11.8□□□□□ -0.52
RPRD1A-202ENST00000399022 TMEM262E9PQX1 116 aa11.79□□□□□ -0.52
RPRD1A-202ENST00000399022 H3BMG7 143 aa11.79□□□□□ -0.52
RPRD1A-202ENST00000399022 K7ERJ3 54 aa11.79□□□□□ -0.52
RPRD1A-202ENST00000399022 A0A0G2JNJ9 132 aa11.79□□□□□ -0.52
RPRD1A-202ENST00000399022 H0YJW9 148 aa11.79□□□□□ -0.52
RPRD1A-202ENST00000399022 Q6ZS92 163 aa11.79□□□□□ -0.52
RPRD1A-202ENST00000399022 Q9UFV3 132 aa11.79□□□□□ -0.52
RPRD1A-202ENST00000399022 WISP2O76076 250 aa11.79□□□□□ -0.52
RPRD1A-202ENST00000399022 TMEM200BQ69YZ2 307 aa11.79□□□□□ -0.52
RPRD1A-202ENST00000399022 PGPEP1Q9NXJ5 209 aa11.79□□□□□ -0.52
RPRD1A-202ENST00000399022 TP53TG3Q9ULZ0 132 aa11.79□□□□□ -0.52
RPRD1A-202ENST00000399022 TNCP24821 2201 aa11.79□□□□□ -0.52
RPRD1A-202ENST00000399022 IGHV3-49A0A0A0MS15 119 aa11.78□□□□□ -0.52
RPRD1A-202ENST00000399022 PSMB11A5LHX3 300 aa11.78□□□□□ -0.52
RPRD1A-202ENST00000399022 PRR20EP86478 221 aa11.78□□□□□ -0.52
RPRD1A-202ENST00000399022 PRR20CP86479 221 aa11.78□□□□□ -0.52
RPRD1A-202ENST00000399022 PRR20DP86480 221 aa11.78□□□□□ -0.52
RPRD1A-202ENST00000399022 PRR20BP86481 221 aa11.78□□□□□ -0.52
RPRD1A-202ENST00000399022 PRR20AP86496 221 aa11.78□□□□□ -0.52
RPRD1A-202ENST00000399022 FABP5P3A8MUU1 101 aa11.78□□□□□ -0.52
RPRD1A-202ENST00000399022 DGAT2L7PQ6IED9 249 aa11.78□□□□□ -0.52
RPRD1A-202ENST00000399022 C16orf92Q96LL3 132 aa11.78□□□□□ -0.52
RPRD1A-202ENST00000399022 GAFA1Q96PS6 74 aa11.78□□□□□ -0.52
RPRD1A-202ENST00000399022 TMEM133Q9H2Q1 129 aa11.78□□□□□ -0.52
RPRD1A-202ENST00000399022 DPM3Q9P2X0 92 aa11.78□□□□□ -0.52
RPRD1A-202ENST00000399022 TMEM213A2RRL7 107 aa11.78□□□□□ -0.52
RPRD1A-202ENST00000399022 FNDC10F2Z333 226 aa11.78□□□□□ -0.52
RPRD1A-202ENST00000399022 ARPC1AQ92747 370 aa11.78□□□□□ -0.52
RPRD1A-202ENST00000399022 LY6HO94772 140 aa11.77□□□□□ -0.52
RPRD1A-202ENST00000399022 Q6ZPA2 131 aa11.77□□□□□ -0.52
RPRD1A-202ENST00000399022 ZNF295-AS1Q8N0V1 137 aa11.77□□□□□ -0.52
RPRD1A-202ENST00000399022 DLX4Q92988 240 aaPredicted RBP11.77□□□□□ -0.52
RPRD1A-202ENST00000399022 VGLL1Q99990 258 aa11.77□□□□□ -0.52
RPRD1A-202ENST00000399022 KLF5Q13887 457 aaPredicted RBP11.77□□□□□ -0.53
RPRD1A-202ENST00000399022 LYPD2Q6UXB3 125 aa11.77□□□□□ -0.53
RPRD1A-202ENST00000399022 RNF125Q96EQ8 232 aa11.77□□□□□ -0.53
RPRD1A-202ENST00000399022 MRAP2Q96G30 205 aa11.77□□□□□ -0.53
RPRD1A-202ENST00000399022 IGHV3-66A0A0C4DH42 116 aa11.77□□□□□ -0.53
RPRD1A-202ENST00000399022 Q86TA4 180 aa11.77□□□□□ -0.53
RPRD1A-202ENST00000399022 TMEM14BQ9NUH8 114 aa11.77□□□□□ -0.53
RPRD1A-202ENST00000399022 SMPXQ9UHP9 88 aa11.77□□□□□ -0.53
RPRD1A-202ENST00000399022 PTPRQQ9UMZ3 2332 aa11.77□□□□□ -0.53
RPRD1A-202ENST00000399022 TSPAN13O95857 204 aa11.76□□□□□ -0.53
RPRD1A-202ENST00000399022 SYT8Q8NBV8 401 aa11.76□□□□□ -0.53
RPRD1A-202ENST00000399022 TMEM158Q8WZ71 300 aa11.76□□□□□ -0.53
RPRD1A-202ENST00000399022 TLN1Q9Y490 2541 aaKnown RBP11.76□□□□□ -0.53
RPRD1A-202ENST00000399022 HTN1P15515 57 aa11.76□□□□□ -0.53
RPRD1A-202ENST00000399022 ADIPOQQ15848 244 aa11.76□□□□□ -0.53
RPRD1A-202ENST00000399022 Q6ZSR3 168 aa11.76□□□□□ -0.53
RPRD1A-202ENST00000399022 ZNF747Q9BV97 191 aa11.76□□□□□ -0.53
RPRD1A-202ENST00000399022 SLC25A2Q9BXI2 301 aa11.76□□□□□ -0.53
RPRD1A-202ENST00000399022 SLC25A39Q9BZJ4 359 aaPredicted RBP11.76□□□□□ -0.53
RPRD1A-202ENST00000399022 PPP1R27Q86WC6 154 aa11.76□□□□□ -0.53
RPRD1A-202ENST00000399022 PCP2Q8IVA1 136 aa11.76□□□□□ -0.53
RPRD1A-202ENST00000399022 GFRA4Q9GZZ7 299 aa11.76□□□□□ -0.53
RPRD1A-202ENST00000399022 FAM106CPP0CH98 169 aa11.76□□□□□ -0.53
RPRD1A-202ENST00000399022 RHOGP84095 191 aa11.76□□□□□ -0.53
RPRD1A-202ENST00000399022 PRR30Q53SZ7 412 aaPredicted RBP11.76□□□□□ -0.53
RPRD1A-202ENST00000399022 CRIP3Q6Q6R5 217 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms