RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 RIPPLY3P57055 190 aa4.13□□□□□ -1.75
TTC3-204ENST00000399017 ZNF114Q8NC26 417 aa4.13□□□□□ -1.75
TTC3-204ENST00000399017 FBLN5Q9UBX5 448 aa4.13□□□□□ -1.75
TTC3-204ENST00000399017 PKD1L2Q7Z442 2459 aa4.13□□□□□ -1.75
TTC3-204ENST00000399017 A0A0A6YYD4 124 aa4.13□□□□□ -1.75
TTC3-204ENST00000399017 TRAV8-2A0A0B4J237 113 aa4.13□□□□□ -1.75
TTC3-204ENST00000399017 H3BUA1 57 aa4.13□□□□□ -1.75
TTC3-204ENST00000399017 TMEM258P61165 79 aa4.13□□□□□ -1.75
TTC3-204ENST00000399017 EGR4Q05215 589 aa4.13□□□□□ -1.75
TTC3-204ENST00000399017 C18orf15Q96N68 181 aa4.13□□□□□ -1.75
TTC3-204ENST00000399017 NDUFAF3Q9BU61 184 aa4.13□□□□□ -1.75
TTC3-204ENST00000399017 TRAV8-1A0A0A6YYK1 113 aa4.13□□□□□ -1.75
TTC3-204ENST00000399017 VPREB1P12018 145 aa4.13□□□□□ -1.75
TTC3-204ENST00000399017 ATP6V0CP27449 155 aa4.13□□□□□ -1.75
TTC3-204ENST00000399017 SYNJ2BPP57105 145 aa4.13□□□□□ -1.75
TTC3-204ENST00000399017 C5orf30Q96GV9 206 aa4.13□□□□□ -1.75
TTC3-204ENST00000399017 MESP1Q9BRJ9 268 aa4.13□□□□□ -1.75
TTC3-204ENST00000399017 LAMTOR2Q9Y2Q5 125 aa4.13□□□□□ -1.75
TTC3-204ENST00000399017 SHISA2Q6UWI4 295 aa4.13□□□□□ -1.75
TTC3-204ENST00000399017 C1QL4Q86Z23 238 aa4.13□□□□□ -1.75
TTC3-204ENST00000399017 C18orf12Q96KH6 178 aa4.13□□□□□ -1.75
TTC3-204ENST00000399017 DERL1Q9BUN8 251 aa4.13□□□□□ -1.75
TTC3-204ENST00000399017 SRXN1Q9BYN0 137 aa4.13□□□□□ -1.75
TTC3-204ENST00000399017 ESDP10768 282 aa4.13□□□□□ -1.75
TTC3-204ENST00000399017 SPATA45Q537H7 98 aa4.13□□□□□ -1.75
TTC3-204ENST00000399017 SLC25A48Q6ZT89 311 aaKnown RBP4.13□□□□□ -1.75
TTC3-204ENST00000399017 LY6G5BQ8NDX9 201 aa4.13□□□□□ -1.75
TTC3-204ENST00000399017 CD300EQ496F6 205 aaPredicted RBP4.12□□□□□ -1.75
TTC3-204ENST00000399017 MRPL55Q7Z7F7 128 aaKnown RBP4.12□□□□□ -1.75
TTC3-204ENST00000399017 PYGO2Q9BRQ0 406 aa4.12□□□□□ -1.75
TTC3-204ENST00000399017 MARVELD1Q9BSK0 173 aa4.12□□□□□ -1.75
TTC3-204ENST00000399017 H3BQ15 152 aa4.12□□□□□ -1.75
TTC3-204ENST00000399017 IGFL3Q6UXB1 125 aa4.12□□□□□ -1.75
TTC3-204ENST00000399017 TMEM30AQ9NV96 361 aa4.12□□□□□ -1.75
TTC3-204ENST00000399017 IGHV1-24A0A0C4DH33 117 aa4.12□□□□□ -1.75
TTC3-204ENST00000399017 RPL18AQ02543 176 aaKnown RBP4.12□□□□□ -1.75
TTC3-204ENST00000399017 MIC13Q5XKP0 118 aa4.12□□□□□ -1.75
TTC3-204ENST00000399017 NCOR2Q9Y618 2525 aa4.12□□□□□ -1.75
TTC3-204ENST00000399017 Q0VG73 95 aa4.12□□□□□ -1.75
TTC3-204ENST00000399017 ANKRD17O75179 2603 aaKnown RBP4.12□□□□□ -1.75
TTC3-204ENST00000399017 A0A087X0M5 115 aa4.12□□□□□ -1.75
TTC3-204ENST00000399017 A0A1B0GX30 115 aa4.12□□□□□ -1.75
TTC3-204ENST00000399017 UBE2V2Q15819 145 aa4.12□□□□□ -1.75
TTC3-204ENST00000399017 C1QL2Q7Z5L3 287 aa4.12□□□□□ -1.75
TTC3-204ENST00000399017 IGHV1-18A0A0C4DH31 117 aa4.12□□□□□ -1.75
TTC3-204ENST00000399017 ZC2HC1AQ96GY0 325 aa4.12□□□□□ -1.75
TTC3-204ENST00000399017 B9D2Q9BPU9 175 aa4.12□□□□□ -1.75
TTC3-204ENST00000399017 TRAV25A0A0B4J276 109 aa4.12□□□□□ -1.75
TTC3-204ENST00000399017 IGHV1-3A0A0C4DH29 117 aa4.12□□□□□ -1.75
TTC3-204ENST00000399017 A0A1B0GVG6 124 aa4.12□□□□□ -1.75
TTC3-204ENST00000399017 ETDCA0A1B0GVM5 59 aa4.12□□□□□ -1.75
TTC3-204ENST00000399017 J3QL48 77 aa4.12□□□□□ -1.75
TTC3-204ENST00000399017 NTN3O00634 580 aaPredicted RBP4.12□□□□□ -1.75
TTC3-204ENST00000399017 GP9P14770 177 aa4.12□□□□□ -1.75
TTC3-204ENST00000399017 SPANXCQ9NY87 97 aa4.12□□□□□ -1.75
TTC3-204ENST00000399017 IGLV3-12A0A075B6K2 115 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 DEFB131AP59861 70 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 CASC2Q6XLA1 102 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 NEGR1Q7Z3B1 354 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 ATP5L2Q7Z4Y8 100 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 IGFBPL1Q8WX77 278 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 RHPN1-AS1Q9BWJ2 59 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 SSBP2P81877 361 aaPredicted RBP4.11□□□□□ -1.75
TTC3-204ENST00000399017 BRD3OSQ6XYD6 125 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 Q9HAA7 133 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 TRAV2A0A0B4J234 112 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 HRKO00198 91 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 CDC42EP2O14613 210 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 TMEM200BQ69YZ2 307 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 VSIG8P0DPA2 414 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 RBM3P98179 157 aaKnown RBP4.11□□□□□ -1.75
TTC3-204ENST00000399017 TNRC6BQ9UPQ9 1833 aaKnown RBP4.11□□□□□ -1.75
TTC3-204ENST00000399017 A0A1W2PR77 199 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 DPRXA6NFQ7 191 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 ZIC3O60481 467 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 C1QTNF9P0C862 333 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 DAZ2Q13117 558 aaKnown RBP4.11□□□□□ -1.75
TTC3-204ENST00000399017 NCMAPQ5T1S8 102 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 C9orf153Q5TBE3 101 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 DMKNQ6E0U4 476 aaPredicted RBP4.11□□□□□ -1.75
TTC3-204ENST00000399017 DAZ4Q86SG3 579 aaKnown RBP4.11□□□□□ -1.75
TTC3-204ENST00000399017 MRPL52Q86TS9 123 aaKnown RBP4.11□□□□□ -1.75
TTC3-204ENST00000399017 DAZ3Q9NR90 486 aaKnown RBP4.11□□□□□ -1.75
TTC3-204ENST00000399017 TRAV13-2A0A0B4J235 113 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 C5orf63A6NC05 138 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 IGHV3-48P01763 117 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 ATP6V0E2Q8NHE4 81 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 TIMM17AQ99595 171 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 SLC25A39Q9BZJ4 359 aaPredicted RBP4.11□□□□□ -1.75
TTC3-204ENST00000399017 LHFPL6Q9Y693 200 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 SAA2-SAA4A0A096LPE2 208 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 SAA2P0DJI9 122 aaPredicted RBP4.11□□□□□ -1.75
TTC3-204ENST00000399017 PRR20EP86478 221 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 PRR20CP86479 221 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 PRR20DP86480 221 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 PRR20BP86481 221 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 PRR20AP86496 221 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 ZNF79Q15937 498 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 C1orf194Q5T5A4 169 aa4.11□□□□□ -1.75
TTC3-204ENST00000399017 CLPSL1A2RUU4 121 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms