RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 LINC00477Q96M19 166 aa11.44□□□□□ -0.58
PCDHGA11-201ENST00000398587 LINC00479Q96M42 142 aa11.44□□□□□ -0.58
PCDHGA11-201ENST00000398587 PRO3102Q9H379 93 aa11.44□□□□□ -0.58
PCDHGA11-201ENST00000398587 IGHV2-70DA0A0C4DH43 119 aa11.44□□□□□ -0.58
PCDHGA11-201ENST00000398587 SUMO2P61956 95 aaKnown RBP11.44□□□□□ -0.58
PCDHGA11-201ENST00000398587 ORMDL2Q53FV1 153 aa11.44□□□□□ -0.58
PCDHGA11-201ENST00000398587 LYZL1Q6UWQ5 148 aa11.44□□□□□ -0.58
PCDHGA11-201ENST00000398587 TRGV11A0A075B6L2 103 aa11.44□□□□□ -0.58
PCDHGA11-201ENST00000398587 NDPQ00604 133 aa11.44□□□□□ -0.58
PCDHGA11-201ENST00000398587 Q8TAT8 98 aa11.44□□□□□ -0.58
PCDHGA11-201ENST00000398587 SNAI2O43623 268 aa11.43□□□□□ -0.58
PCDHGA11-201ENST00000398587 PFN1P07737 140 aaKnown RBP11.43□□□□□ -0.58
PCDHGA11-201ENST00000398587 Q86TA4 180 aa11.43□□□□□ -0.58
PCDHGA11-201ENST00000398587 TMEM256Q8N2U0 113 aa11.43□□□□□ -0.58
PCDHGA11-201ENST00000398587 MEIG1Q5JSS6 88 aa11.43□□□□□ -0.58
PCDHGA11-201ENST00000398587 PEF1Q9UBV8 284 aaKnown RBP11.43□□□□□ -0.58
PCDHGA11-201ENST00000398587 SHISA9B4DS77 424 aa11.43□□□□□ -0.58
PCDHGA11-201ENST00000398587 ATP6V0E1O15342 81 aa11.43□□□□□ -0.58
PCDHGA11-201ENST00000398587 SH2D1AO60880 128 aa11.43□□□□□ -0.58
PCDHGA11-201ENST00000398587 NDUFB8O95169 186 aa11.43□□□□□ -0.58
PCDHGA11-201ENST00000398587 IFI27L1Q96BM0 104 aa11.43□□□□□ -0.58
PCDHGA11-201ENST00000398587 IGHV1-69DA0A0B4J2H0 117 aa11.42□□□□□ -0.58
PCDHGA11-201ENST00000398587 SRRM4A7MD48 611 aaKnown RBP11.42□□□□□ -0.58
PCDHGA11-201ENST00000398587 IGHV1-69P01742 117 aa11.42□□□□□ -0.58
PCDHGA11-201ENST00000398587 SMIM13P0DJ93 91 aa11.42□□□□□ -0.58
PCDHGA11-201ENST00000398587 C8orf31Q8N9H6 132 aa11.42□□□□□ -0.58
PCDHGA11-201ENST00000398587 CYSLTR1Q9Y271 337 aa11.42□□□□□ -0.58
PCDHGA11-201ENST00000398587 LAMTOR2Q9Y2Q5 125 aa11.42□□□□□ -0.58
PCDHGA11-201ENST00000398587 ZNF688P0C7X2 276 aa11.42□□□□□ -0.58
PCDHGA11-201ENST00000398587 C10orf91Q5T1B1 145 aa11.42□□□□□ -0.58
PCDHGA11-201ENST00000398587 PIEZO1Q92508 2521 aa11.42□□□□□ -0.58
PCDHGA11-201ENST00000398587 LHBP01229 141 aa11.42□□□□□ -0.58
PCDHGA11-201ENST00000398587 TMEM101Q96IK0 257 aa11.42□□□□□ -0.58
PCDHGA11-201ENST00000398587 C2orf88Q9BSF0 95 aa11.42□□□□□ -0.58
PCDHGA11-201ENST00000398587 TRGV2A0A075B6R0 118 aa11.42□□□□□ -0.58
PCDHGA11-201ENST00000398587 PIP4P2Q8N4L2 257 aa11.42□□□□□ -0.58
PCDHGA11-201ENST00000398587 C11orf44Q8N8P7 122 aa11.42□□□□□ -0.58
PCDHGA11-201ENST00000398587 IGKV3OR2-268A0A0C4DH90 116 aa11.41□□□□□ -0.58
PCDHGA11-201ENST00000398587 RHPN1-AS1Q9BWJ2 59 aa11.41□□□□□ -0.58
PCDHGA11-201ENST00000398587 ARFGEF3Q5TH69 2177 aa11.41□□□□□ -0.58
PCDHGA11-201ENST00000398587 TPSG1Q9NRR2 321 aa11.41□□□□□ -0.58
PCDHGA11-201ENST00000398587 D6R8Y8 96 aa11.41□□□□□ -0.58
PCDHGA11-201ENST00000398587 EVI2AP22794 236 aa11.41□□□□□ -0.58
PCDHGA11-201ENST00000398587 LINC01559Q495D7 138 aa11.41□□□□□ -0.58
PCDHGA11-201ENST00000398587 MRPL27Q9P0M9 148 aaKnown RBP11.41□□□□□ -0.58
PCDHGA11-201ENST00000398587 LINC01549A6NIU2 74 aa11.4□□□□□ -0.58
PCDHGA11-201ENST00000398587 DIAPH2-AS1Q14236 149 aa11.4□□□□□ -0.58
PCDHGA11-201ENST00000398587 RUSC1-AS1Q66K80 236 aa11.4□□□□□ -0.58
PCDHGA11-201ENST00000398587 CTSZQ9UBR2 303 aa11.4□□□□□ -0.58
PCDHGA11-201ENST00000398587 LOC102724200A0A096LPH7 203 aaPredicted RBP11.4□□□□□ -0.58
PCDHGA11-201ENST00000398587 PLP1P60201 277 aa11.4□□□□□ -0.58
PCDHGA11-201ENST00000398587 IGFL4Q6B9Z1 124 aa11.4□□□□□ -0.58
PCDHGA11-201ENST00000398587 KIAA1549LQ6ZVL6 1849 aa11.4□□□□□ -0.58
PCDHGA11-201ENST00000398587 DPM2O94777 84 aa11.4□□□□□ -0.58
PCDHGA11-201ENST00000398587 SP5Q6BEB4 398 aaPredicted RBP11.4□□□□□ -0.58
PCDHGA11-201ENST00000398587 DAZ1Q9NQZ3 744 aaKnown RBP11.4□□□□□ -0.58
PCDHGA11-201ENST00000398587 IFI27P40305 119 aaPredicted RBP11.4□□□□□ -0.59
PCDHGA11-201ENST00000398587 ZNF492Q9P255 531 aa11.4□□□□□ -0.59
PCDHGA11-201ENST00000398587 NDUFA3O95167 84 aa11.39□□□□□ -0.59
PCDHGA11-201ENST00000398587 PYY3Q5JQD4 70 aa11.39□□□□□ -0.59
PCDHGA11-201ENST00000398587 TMEM131Q92545 1883 aa11.39□□□□□ -0.59
PCDHGA11-201ENST00000398587 GFRA4Q9GZZ7 299 aa11.39□□□□□ -0.59
PCDHGA11-201ENST00000398587 VCX2Q9H322 139 aa11.39□□□□□ -0.59
PCDHGA11-201ENST00000398587 GGTLC3B5MD39 225 aa11.39□□□□□ -0.59
PCDHGA11-201ENST00000398587 OVOL3O00110 214 aa11.39□□□□□ -0.59
PCDHGA11-201ENST00000398587 NCR2O95944 276 aa11.39□□□□□ -0.59
PCDHGA11-201ENST00000398587 WFDC12Q8WWY7 111 aa11.39□□□□□ -0.59
PCDHGA11-201ENST00000398587 ADAMTS9Q9P2N4 1935 aa11.39□□□□□ -0.59
PCDHGA11-201ENST00000398587 TRBV19A0A075B6N1 114 aa11.39□□□□□ -0.59
PCDHGA11-201ENST00000398587 C22orf46C9J442 243 aa11.39□□□□□ -0.59
PCDHGA11-201ENST00000398587 H3BRM9 83 aa11.39□□□□□ -0.59
PCDHGA11-201ENST00000398587 CMC4P56277 68 aaPredicted RBP11.39□□□□□ -0.59
PCDHGA11-201ENST00000398587 PRR20EP86478 221 aa11.39□□□□□ -0.59
PCDHGA11-201ENST00000398587 PRR20CP86479 221 aa11.39□□□□□ -0.59
PCDHGA11-201ENST00000398587 PRR20DP86480 221 aa11.39□□□□□ -0.59
PCDHGA11-201ENST00000398587 PRR20BP86481 221 aa11.39□□□□□ -0.59
PCDHGA11-201ENST00000398587 PRR20AP86496 221 aa11.39□□□□□ -0.59
PCDHGA11-201ENST00000398587 C1orf122Q6ZSJ8 110 aa11.39□□□□□ -0.59
PCDHGA11-201ENST00000398587 FAM231BA6NCW3 169 aa11.38□□□□□ -0.59
PCDHGA11-201ENST00000398587 TMEM262E9PQX1 116 aa11.38□□□□□ -0.59
PCDHGA11-201ENST00000398587 IGHV2-70P01814 119 aa11.38□□□□□ -0.59
PCDHGA11-201ENST00000398587 G3V318 75 aa11.38□□□□□ -0.59
PCDHGA11-201ENST00000398587 FCN3O75636 299 aa11.38□□□□□ -0.59
PCDHGA11-201ENST00000398587 CT83Q5H943 113 aa11.38□□□□□ -0.59
PCDHGA11-201ENST00000398587 LYPD6BQ8NI32 183 aa11.38□□□□□ -0.59
PCDHGA11-201ENST00000398587 CYYR1Q96J86 154 aa11.38□□□□□ -0.59
PCDHGA11-201ENST00000398587 SLC25A2Q9BXI2 301 aa11.38□□□□□ -0.59
PCDHGA11-201ENST00000398587 SEM1Q6ZVN7 128 aa11.37□□□□□ -0.59
PCDHGA11-201ENST00000398587 THAP8Q8NA92 274 aa11.37□□□□□ -0.59
PCDHGA11-201ENST00000398587 ALKBH7Q9BT30 221 aaPredicted RBP11.37□□□□□ -0.59
PCDHGA11-201ENST00000398587 GRNP28799 593 aaKnown RBP11.37□□□□□ -0.59
PCDHGA11-201ENST00000398587 C11orf52Q96A22 123 aa11.37□□□□□ -0.59
PCDHGA11-201ENST00000398587 SELENOKQ9Y6D0 94 aa11.37□□□□□ -0.59
PCDHGA11-201ENST00000398587 DENND4AQ7Z401 1863 aa11.37□□□□□ -0.59
PCDHGA11-201ENST00000398587 RNF223E7ERA6 249 aa11.37□□□□□ -0.59
PCDHGA11-201ENST00000398587 IGLC1P0CG04 106 aa11.37□□□□□ -0.59
PCDHGA11-201ENST00000398587 TMEM75Q8N9X5 138 aa11.37□□□□□ -0.59
PCDHGA11-201ENST00000398587 MRAP2Q96G30 205 aa11.37□□□□□ -0.59
PCDHGA11-201ENST00000398587 TMEM249Q2WGJ8 235 aa11.37□□□□□ -0.59
PCDHGA11-201ENST00000398587 SPRNQ5BIV9 151 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms