RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 ID1P41134 155 aa12.85□□□□□ -0.35
CSNK1D-204ENST00000398519 IGFL4Q6B9Z1 124 aa12.85□□□□□ -0.35
CSNK1D-204ENST00000398519 LINC00322Q6ZN03 302 aaPredicted RBP12.85□□□□□ -0.35
CSNK1D-204ENST00000398519 RPP25LQ8N5L8 163 aaKnown RBP12.85□□□□□ -0.35
CSNK1D-204ENST00000398519 C20orf173Q96LM9 149 aa12.85□□□□□ -0.35
CSNK1D-204ENST00000398519 LINC00052Q96N35 136 aa12.85□□□□□ -0.35
CSNK1D-204ENST00000398519 ZNF586Q9NXT0 402 aa12.85□□□□□ -0.35
CSNK1D-204ENST00000398519 SLC17A3O00476 420 aa12.84□□□□□ -0.35
CSNK1D-204ENST00000398519 TMEM41BQ5BJD5 291 aa12.84□□□□□ -0.35
CSNK1D-204ENST00000398519 LCN15Q6UWW0 184 aa12.84□□□□□ -0.35
CSNK1D-204ENST00000398519 ZNF503Q96F45 646 aa12.84□□□□□ -0.35
CSNK1D-204ENST00000398519 RPRMQ9NS64 109 aa12.84□□□□□ -0.35
CSNK1D-204ENST00000398519 A0A1W2PPV4 95 aa12.83□□□□□ -0.36
CSNK1D-204ENST00000398519 OR7C2O60412 319 aa12.83□□□□□ -0.36
CSNK1D-204ENST00000398519 HIST1H1EP10412 219 aaKnown RBP12.83□□□□□ -0.36
CSNK1D-204ENST00000398519 KHDC3LQ587J8 217 aa12.83□□□□□ -0.36
CSNK1D-204ENST00000398519 RNF182Q8N6D2 247 aa12.83□□□□□ -0.36
CSNK1D-204ENST00000398519 STOML3Q8TAV4 291 aa12.83□□□□□ -0.36
CSNK1D-204ENST00000398519 SAT2Q96F10 170 aaPredicted RBP12.83□□□□□ -0.36
CSNK1D-204ENST00000398519 B9D2Q9BPU9 175 aa12.83□□□□□ -0.36
CSNK1D-204ENST00000398519 PAXXQ9BUH6 204 aa12.83□□□□□ -0.36
CSNK1D-204ENST00000398519 OR51M1Q9H341 326 aa12.83□□□□□ -0.36
CSNK1D-204ENST00000398519 ZNF331Q9NQX6 463 aaPredicted RBP12.83□□□□□ -0.36
CSNK1D-204ENST00000398519 KNCNA6PVL3 124 aa12.82□□□□□ -0.36
CSNK1D-204ENST00000398519 OR10J4P0C629 311 aa12.82□□□□□ -0.36
CSNK1D-204ENST00000398519 CDC34P49427 236 aaPredicted RBP12.82□□□□□ -0.36
CSNK1D-204ENST00000398519 NKX2-5P52952 324 aaPredicted RBP12.82□□□□□ -0.36
CSNK1D-204ENST00000398519 TAS2R45P59539 299 aa12.82□□□□□ -0.36
CSNK1D-204ENST00000398519 DEFB1P60022 68 aa12.82□□□□□ -0.36
CSNK1D-204ENST00000398519 GUK1Q16774 197 aa12.82□□□□□ -0.36
CSNK1D-204ENST00000398519 BAP18Q8IXM2 172 aa12.82□□□□□ -0.36
CSNK1D-204ENST00000398519 LRRC20Q8TCA0 184 aa12.82□□□□□ -0.36
CSNK1D-204ENST00000398519 FXYD5Q96DB9 178 aa12.82□□□□□ -0.36
CSNK1D-204ENST00000398519 TRBV19A0A075B6N1 114 aa12.81□□□□□ -0.36
CSNK1D-204ENST00000398519 HMGB3O15347 200 aaKnown RBP12.81□□□□□ -0.36
CSNK1D-204ENST00000398519 SEC11BP0C7V7 166 aa12.81□□□□□ -0.36
CSNK1D-204ENST00000398519 TPT1P13693 172 aaKnown RBP12.81□□□□□ -0.36
CSNK1D-204ENST00000398519 HLA-DMBP28068 263 aa12.81□□□□□ -0.36
CSNK1D-204ENST00000398519 EIF5AP63241 154 aaKnown RBP12.81□□□□□ -0.36
CSNK1D-204ENST00000398519 AKR1C8PQ5T2L2 129 aa12.81□□□□□ -0.36
CSNK1D-204ENST00000398519 SLC50A1Q9BRV3 221 aa12.81□□□□□ -0.36
CSNK1D-204ENST00000398519 DNAH9Q9NYC9 4486 aa12.81□□□□□ -0.36
CSNK1D-204ENST00000398519 LOC102724200A0A096LPH7 203 aaPredicted RBP12.81□□□□□ -0.36
CSNK1D-204ENST00000398519 NDUFB4O95168 129 aa12.81□□□□□ -0.36
CSNK1D-204ENST00000398519 ACTL10Q5JWF8 245 aa12.81□□□□□ -0.36
CSNK1D-204ENST00000398519 SSX7Q7RTT5 188 aa12.81□□□□□ -0.36
CSNK1D-204ENST00000398519 SBSPONQ8IVN8 264 aa12.81□□□□□ -0.36
CSNK1D-204ENST00000398519 BLNKQ8WV28 456 aa12.81□□□□□ -0.36
CSNK1D-204ENST00000398519 RNF141Q8WVD5 230 aa12.81□□□□□ -0.36
CSNK1D-204ENST00000398519 RAB24Q969Q5 203 aa12.81□□□□□ -0.36
CSNK1D-204ENST00000398519 PLA2G2EQ9NZK7 142 aa12.81□□□□□ -0.36
CSNK1D-204ENST00000398519 ZNF253O75346 499 aa12.8□□□□□ -0.36
CSNK1D-204ENST00000398519 NBEAP1P0C6P0 100 aa12.8□□□□□ -0.36
CSNK1D-204ENST00000398519 STAG3L2P0CL84 134 aa12.8□□□□□ -0.36
CSNK1D-204ENST00000398519 STAG3L3P0CL85 134 aa12.8□□□□□ -0.36
CSNK1D-204ENST00000398519 RPL35AP18077 110 aaKnown RBP12.8□□□□□ -0.36
CSNK1D-204ENST00000398519 UBE2L3P68036 154 aaKnown RBP12.8□□□□□ -0.36
CSNK1D-204ENST00000398519 PDE6HQ13956 83 aa12.8□□□□□ -0.36
CSNK1D-204ENST00000398519 ZNF726P1Q15940 193 aa12.8□□□□□ -0.36
CSNK1D-204ENST00000398519 GDF5OSQ5U4N7 250 aa12.8□□□□□ -0.36
CSNK1D-204ENST00000398519 ASCL2Q99929 193 aa12.8□□□□□ -0.36
CSNK1D-204ENST00000398519 ACTR3CQ9C0K3 210 aaPredicted RBP12.8□□□□□ -0.36
CSNK1D-204ENST00000398519 COL7A1Q02388 2944 aa12.8□□□□□ -0.36
CSNK1D-204ENST00000398519 F6UB75 175 aa12.79□□□□□ -0.36
CSNK1D-204ENST00000398519 ARL14EPLP0DKL9 152 aa12.79□□□□□ -0.36
CSNK1D-204ENST00000398519 HAGHQ16775 308 aa12.79□□□□□ -0.36
CSNK1D-204ENST00000398519 PQLC2Q6ZP29 291 aa12.79□□□□□ -0.36
CSNK1D-204ENST00000398519 FOXI2Q6ZQN5 318 aa12.79□□□□□ -0.36
CSNK1D-204ENST00000398519 SLC51BQ86UW2 128 aa12.79□□□□□ -0.36
CSNK1D-204ENST00000398519 STHQ8IWL8 128 aa12.79□□□□□ -0.36
CSNK1D-204ENST00000398519 TMED6Q8WW62 240 aa12.79□□□□□ -0.36
CSNK1D-204ENST00000398519 SAV1Q9H4B6 383 aaPredicted RBP12.79□□□□□ -0.36
CSNK1D-204ENST00000398519 HLA-DRB4P13762 266 aa12.78□□□□□ -0.36
CSNK1D-204ENST00000398519 PSG3Q16557 428 aa12.78□□□□□ -0.36
CSNK1D-204ENST00000398519 TRPT1Q86TN4 253 aaKnown RBP12.78□□□□□ -0.36
CSNK1D-204ENST00000398519 ZNF738Q8NE65 137 aa12.78□□□□□ -0.36
CSNK1D-204ENST00000398519 HLA-DRB4X5D2U9 266 aa12.78□□□□□ -0.36
CSNK1D-204ENST00000398519 H3BMM0 161 aa12.77□□□□□ -0.36
CSNK1D-204ENST00000398519 C4BPBP20851 252 aa12.77□□□□□ -0.36
CSNK1D-204ENST00000398519 PHYHIPLQ96FC7 376 aa12.77□□□□□ -0.36
CSNK1D-204ENST00000398519 A0A0J9YX75 114 aa12.77□□□□□ -0.37
CSNK1D-204ENST00000398519 CTXND1A0A1B0GTU2 59 aa12.77□□□□□ -0.37
CSNK1D-204ENST00000398519 PRB4P10163 310 aaPredicted RBP12.77□□□□□ -0.37
CSNK1D-204ENST00000398519 FHITP49789 147 aa12.77□□□□□ -0.37
CSNK1D-204ENST00000398519 PSG9Q00887 426 aa12.77□□□□□ -0.37
CSNK1D-204ENST00000398519 EXOC3-AS1Q8N2X6 119 aa12.77□□□□□ -0.37
CSNK1D-204ENST00000398519 AGRNO00468 2067 aa12.76□□□□□ -0.37
CSNK1D-204ENST00000398519 KIR2DL5BA0A0G2JN68 375 aa12.76□□□□□ -0.37
CSNK1D-204ENST00000398519 KIR2DL5BA0A0G2JPC4 375 aa12.76□□□□□ -0.37
CSNK1D-204ENST00000398519 ZNF705FA8MVS1 300 aaPredicted RBP12.76□□□□□ -0.37
CSNK1D-204ENST00000398519 UMAD1C9J7I0 102 aa12.76□□□□□ -0.37
CSNK1D-204ENST00000398519 APOC4P55056 127 aa12.76□□□□□ -0.37
CSNK1D-204ENST00000398519 EBLN2Q6P2I7 272 aa12.76□□□□□ -0.37
CSNK1D-204ENST00000398519 KIR2DL5AQ8N109 375 aa12.76□□□□□ -0.37
CSNK1D-204ENST00000398519 KIR2DL5BQ8NHK3 375 aa12.76□□□□□ -0.37
CSNK1D-204ENST00000398519 RPUSD4Q96CM3 377 aaKnown RBP12.76□□□□□ -0.37
CSNK1D-204ENST00000398519 CLEC5AQ9NY25 188 aa12.76□□□□□ -0.37
CSNK1D-204ENST00000398519 BOLA1Q9Y3E2 137 aa12.76□□□□□ -0.37
CSNK1D-204ENST00000398519 CXorf1O96002 111 aa12.75□□□□□ -0.37
CSNK1D-204ENST00000398519 GCHFRP30047 84 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms