RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 IGHV3OR16-13A0A075B7E8 117 aa14.82□□□□□ -0.04
PDLIM2-205ENST00000397761 IGHV3-49A0A0A0MS15 119 aa14.82□□□□□ -0.04
PDLIM2-205ENST00000397761 IGHV3-74A0A0B4J1X5 117 aa14.82□□□□□ -0.04
PDLIM2-205ENST00000397761 F8W036 122 aa14.82□□□□□ -0.04
PDLIM2-205ENST00000397761 SNRPCP09234 159 aaKnown RBP14.82□□□□□ -0.04
PDLIM2-205ENST00000397761 GALR1P47211 349 aa14.82□□□□□ -0.04
PDLIM2-205ENST00000397761 SYNJ2BPP57105 145 aa14.82□□□□□ -0.04
PDLIM2-205ENST00000397761 FOXL1Q12952 345 aa14.82□□□□□ -0.04
PDLIM2-205ENST00000397761 SOHLH1Q5JUK2 328 aa14.82□□□□□ -0.04
PDLIM2-205ENST00000397761 DPF1Q92782 380 aa14.82□□□□□ -0.04
PDLIM2-205ENST00000397761 GRAMD2BQ96HH9 432 aa14.82□□□□□ -0.04
PDLIM2-205ENST00000397761 DNHD1Q96M86 4753 aa14.81□□□□□ -0.04
PDLIM2-205ENST00000397761 IGHV3-66A0A0C4DH42 116 aa14.81□□□□□ -0.04
PDLIM2-205ENST00000397761 CHEK1O14757 476 aa14.81□□□□□ -0.04
PDLIM2-205ENST00000397761 SLURP1P55000 103 aa14.81□□□□□ -0.04
PDLIM2-205ENST00000397761 RANP62826 216 aaKnown RBP14.81□□□□□ -0.04
PDLIM2-205ENST00000397761 SUMO1P63165 101 aaKnown RBP14.81□□□□□ -0.04
PDLIM2-205ENST00000397761 HIST2H2BDQ6DRA6 164 aa14.81□□□□□ -0.04
PDLIM2-205ENST00000397761 SIGLEC15Q6ZMC9 328 aa14.81□□□□□ -0.04
PDLIM2-205ENST00000397761 ELOVL1Q9BW60 279 aa14.81□□□□□ -0.04
PDLIM2-205ENST00000397761 RHPN1-AS1Q9BWJ2 59 aa14.81□□□□□ -0.04
PDLIM2-205ENST00000397761 Q9H3A6 140 aa14.81□□□□□ -0.04
PDLIM2-205ENST00000397761 OTORQ9NRC9 128 aa14.81□□□□□ -0.04
PDLIM2-205ENST00000397761 H3BTX0 84 aa14.8□□□□□ -0.04
PDLIM2-205ENST00000397761 SLC17A3O00476 420 aa14.8□□□□□ -0.04
PDLIM2-205ENST00000397761 ATF4P18848 351 aaPredicted RBP14.8□□□□□ -0.04
PDLIM2-205ENST00000397761 MEOX2P50222 304 aa14.8□□□□□ -0.04
PDLIM2-205ENST00000397761 SCO2A0A1W2PP80 73 aa14.78□□□□□ -0.04
PDLIM2-205ENST00000397761 C2orf70A6NJV1 201 aa14.78□□□□□ -0.04
PDLIM2-205ENST00000397761 CCL24O00175 119 aa14.78□□□□□ -0.04
PDLIM2-205ENST00000397761 EDN2P20800 178 aa14.78□□□□□ -0.04
PDLIM2-205ENST00000397761 BMI1P35226 326 aa14.78□□□□□ -0.04
PDLIM2-205ENST00000397761 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.78□□□□□ -0.04
PDLIM2-205ENST00000397761 NDUFA11Q86Y39 141 aa14.78□□□□□ -0.04
PDLIM2-205ENST00000397761 C5orf17Q8NAS9 161 aa14.78□□□□□ -0.04
PDLIM2-205ENST00000397761 C2CD4CQ8TF44 421 aa14.78□□□□□ -0.04
PDLIM2-205ENST00000397761 DUX3Q96PT4 197 aa14.78□□□□□ -0.04
PDLIM2-205ENST00000397761 A0A1W2PRX2 142 aa14.77□□□□□ -0.04
PDLIM2-205ENST00000397761 PGPA6NDG6 321 aa14.77□□□□□ -0.04
PDLIM2-205ENST00000397761 PSG9Q00887 426 aa14.77□□□□□ -0.04
PDLIM2-205ENST00000397761 FAM74A3Q4VXF1 159 aa14.77□□□□□ -0.04
PDLIM2-205ENST00000397761 DLX4Q92988 240 aaPredicted RBP14.77□□□□□ -0.04
PDLIM2-205ENST00000397761 PARLQ9H300 379 aa14.77□□□□□ -0.04
PDLIM2-205ENST00000397761 ZNF331Q9NQX6 463 aaPredicted RBP14.77□□□□□ -0.04
PDLIM2-205ENST00000397761 HELTA6NFD8 242 aa14.76□□□□□ -0.05
PDLIM2-205ENST00000397761 CBLN1P23435 193 aa14.76□□□□□ -0.05
PDLIM2-205ENST00000397761 ARL6IP6Q8N6S5 226 aa14.76□□□□□ -0.05
PDLIM2-205ENST00000397761 HIST1H2BAQ96A08 127 aa14.76□□□□□ -0.05
PDLIM2-205ENST00000397761 STAB1Q9NY15 2570 aa14.76□□□□□ -0.05
PDLIM2-205ENST00000397761 ZNF785A8K8V0 405 aa14.76□□□□□ -0.05
PDLIM2-205ENST00000397761 APOC3P02656 99 aa14.76□□□□□ -0.05
PDLIM2-205ENST00000397761 CEBPGP53567 150 aa14.76□□□□□ -0.05
PDLIM2-205ENST00000397761 GUCA2BQ16661 112 aa14.76□□□□□ -0.05
PDLIM2-205ENST00000397761 ADAMTSL5Q6ZMM2 481 aa14.76□□□□□ -0.05
PDLIM2-205ENST00000397761 EXOC3-AS1Q8N2X6 119 aa14.76□□□□□ -0.05
PDLIM2-205ENST00000397761 OR9G4Q8NGQ1 327 aa14.76□□□□□ -0.05
PDLIM2-205ENST00000397761 RPUSD4Q96CM3 377 aaKnown RBP14.76□□□□□ -0.05
PDLIM2-205ENST00000397761 SLC50A1Q9BRV3 221 aa14.76□□□□□ -0.05
PDLIM2-205ENST00000397761 PEMTQ9UBM1 199 aa14.76□□□□□ -0.05
PDLIM2-205ENST00000397761 EPDR1Q9UM22 224 aa14.76□□□□□ -0.05
PDLIM2-205ENST00000397761 SLC25A5P05141 298 aaKnown RBP14.75□□□□□ -0.05
PDLIM2-205ENST00000397761 FOLR2P14207 255 aa14.75□□□□□ -0.05
PDLIM2-205ENST00000397761 AWAT1Q58HT5 328 aa14.75□□□□□ -0.05
PDLIM2-205ENST00000397761 SMIM7Q9BQ49 75 aa14.75□□□□□ -0.05
PDLIM2-205ENST00000397761 DERL1Q9BUN8 251 aa14.75□□□□□ -0.05
PDLIM2-205ENST00000397761 ZNF727A8MUV8 499 aa14.74□□□□□ -0.05
PDLIM2-205ENST00000397761 PEX7O00628 323 aa14.74□□□□□ -0.05
PDLIM2-205ENST00000397761 SVBPQ8N300 66 aa14.74□□□□□ -0.05
PDLIM2-205ENST00000397761 AAMDCQ9H7C9 122 aa14.74□□□□□ -0.05
PDLIM2-205ENST00000397761 FBN1P35555 2871 aaKnown RBP14.74□□□□□ -0.05
PDLIM2-205ENST00000397761 SOCS3O14543 225 aa14.73□□□□□ -0.05
PDLIM2-205ENST00000397761 TCRAP04437 139 aa14.73□□□□□ -0.05
PDLIM2-205ENST00000397761 CITED1Q99966 193 aa14.73□□□□□ -0.05
PDLIM2-205ENST00000397761 NIPSNAP3BQ9BS92 247 aa14.73□□□□□ -0.05
PDLIM2-205ENST00000397761 ATG101Q9BSB4 218 aa14.73□□□□□ -0.05
PDLIM2-205ENST00000397761 NRN1Q9NPD7 142 aa14.73□□□□□ -0.05
PDLIM2-205ENST00000397761 KLF12Q9Y4X4 402 aa14.73□□□□□ -0.05
PDLIM2-205ENST00000397761 TRBV20OR9-2A0A075B6H5 130 aa14.72□□□□□ -0.05
PDLIM2-205ENST00000397761 TRAV8-2A0A0B4J237 113 aa14.72□□□□□ -0.05
PDLIM2-205ENST00000397761 CSN3P07498 182 aa14.72□□□□□ -0.05
PDLIM2-205ENST00000397761 RPL35P42766 123 aaKnown RBP14.72□□□□□ -0.05
PDLIM2-205ENST00000397761 GNG5P63218 68 aa14.72□□□□□ -0.05
PDLIM2-205ENST00000397761 KRTAP24-1Q3LI83 254 aa14.72□□□□□ -0.05
PDLIM2-205ENST00000397761 TCF24Q7RTU0 167 aa14.72□□□□□ -0.05
PDLIM2-205ENST00000397761 CLEC5AQ9NY25 188 aa14.72□□□□□ -0.05
PDLIM2-205ENST00000397761 C9JCJ5 164 aa14.71□□□□□ -0.05
PDLIM2-205ENST00000397761 ZNF674Q2M3X9 581 aa14.71□□□□□ -0.05
PDLIM2-205ENST00000397761 MDFIQ99750 246 aa14.71□□□□□ -0.05
PDLIM2-205ENST00000397761 SDF2L1Q9HCN8 221 aa14.71□□□□□ -0.05
PDLIM2-205ENST00000397761 MLXQ9UH92 298 aa14.71□□□□□ -0.05
PDLIM2-205ENST00000397761 NAT8Q9UHE5 227 aa14.71□□□□□ -0.05
PDLIM2-205ENST00000397761 PRELID1Q9Y255 219 aa14.71□□□□□ -0.05
PDLIM2-205ENST00000397761 M0QZ24 198 aa14.7□□□□□ -0.06
PDLIM2-205ENST00000397761 M0R3E3 92 aa14.7□□□□□ -0.06
PDLIM2-205ENST00000397761 AKR1C3P42330 323 aa14.7□□□□□ -0.06
PDLIM2-205ENST00000397761 TMEM241Q24JQ0 296 aa14.7□□□□□ -0.06
PDLIM2-205ENST00000397761 NSUN5P1Q3KNT7 163 aa14.7□□□□□ -0.06
PDLIM2-205ENST00000397761 CMTM2Q8TAZ6 248 aa14.7□□□□□ -0.06
PDLIM2-205ENST00000397761 MRPL53Q96EL3 112 aaKnown RBP14.7□□□□□ -0.06
PDLIM2-205ENST00000397761 SIGLEC8Q9NYZ4 499 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms