RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 OR4C46A6NHA9 309 aa14.57□□□□□ -0.08
MAP1LC3A-203ENST00000397709 SNRPCP09234 159 aaKnown RBP14.57□□□□□ -0.08
MAP1LC3A-203ENST00000397709 GCHFRP30047 84 aa14.57□□□□□ -0.08
MAP1LC3A-203ENST00000397709 TFPI2P48307 235 aa14.57□□□□□ -0.08
MAP1LC3A-203ENST00000397709 UBE2L3P68036 154 aaKnown RBP14.57□□□□□ -0.08
MAP1LC3A-203ENST00000397709 GUK1Q16774 197 aa14.57□□□□□ -0.08
MAP1LC3A-203ENST00000397709 WFDC3Q8IUB2 231 aa14.57□□□□□ -0.08
MAP1LC3A-203ENST00000397709 SUN5Q8TC36 379 aa14.57□□□□□ -0.08
MAP1LC3A-203ENST00000397709 MGAM2Q2M2H8 2515 aa14.56□□□□□ -0.08
MAP1LC3A-203ENST00000397709 TRBV19A0A075B6N1 114 aa14.56□□□□□ -0.08
MAP1LC3A-203ENST00000397709 ZNF705EA8MWA4 302 aaPredicted RBP14.56□□□□□ -0.08
MAP1LC3A-203ENST00000397709 H3BTX0 84 aa14.56□□□□□ -0.08
MAP1LC3A-203ENST00000397709 IFNA7P01567 189 aa14.56□□□□□ -0.08
MAP1LC3A-203ENST00000397709 H2AFB1P0C5Y9 115 aa14.56□□□□□ -0.08
MAP1LC3A-203ENST00000397709 FGF8P55075 233 aaPredicted RBP14.56□□□□□ -0.08
MAP1LC3A-203ENST00000397709 KRTAP10-11P60412 298 aa14.56□□□□□ -0.08
MAP1LC3A-203ENST00000397709 SAMD13Q5VXD3 122 aa14.56□□□□□ -0.08
MAP1LC3A-203ENST00000397709 SFT2D1Q8WV19 159 aa14.56□□□□□ -0.08
MAP1LC3A-203ENST00000397709 SAT2Q96F10 170 aaPredicted RBP14.56□□□□□ -0.08
MAP1LC3A-203ENST00000397709 SLC17A3O00476 420 aa14.55□□□□□ -0.08
MAP1LC3A-203ENST00000397709 ZNF253O75346 499 aa14.55□□□□□ -0.08
MAP1LC3A-203ENST00000397709 NBEAP1P0C6P0 100 aa14.55□□□□□ -0.08
MAP1LC3A-203ENST00000397709 PDE6HQ13956 83 aa14.55□□□□□ -0.08
MAP1LC3A-203ENST00000397709 FAM24BQ8N5W8 94 aa14.55□□□□□ -0.08
MAP1LC3A-203ENST00000397709 ZMAT5Q9UDW3 170 aaKnown RBP14.55□□□□□ -0.08
MAP1LC3A-203ENST00000397709 TRAV8-2A0A0B4J237 113 aa14.54□□□□□ -0.08
MAP1LC3A-203ENST00000397709 TRAV1-1A0A0B4J248 108 aa14.54□□□□□ -0.08
MAP1LC3A-203ENST00000397709 NDUFB4O95168 129 aa14.54□□□□□ -0.08
MAP1LC3A-203ENST00000397709 IFITM2Q01629 132 aa14.54□□□□□ -0.08
MAP1LC3A-203ENST00000397709 KPRPQ5T749 579 aaPredicted RBP14.54□□□□□ -0.08
MAP1LC3A-203ENST00000397709 BLNKQ8WV28 456 aa14.54□□□□□ -0.08
MAP1LC3A-203ENST00000397709 C16orf92Q96LL3 132 aa14.54□□□□□ -0.08
MAP1LC3A-203ENST00000397709 SLC50A1Q9BRV3 221 aa14.54□□□□□ -0.08
MAP1LC3A-203ENST00000397709 TMPRSS5Q9H3S3 457 aa14.54□□□□□ -0.08
MAP1LC3A-203ENST00000397709 TMEM167BQ9NRX6 74 aa14.54□□□□□ -0.08
MAP1LC3A-203ENST00000397709 UBQLN2Q9UHD9 624 aa14.54□□□□□ -0.08
MAP1LC3A-203ENST00000397709 SORL1Q92673 2214 aa14.54□□□□□ -0.08
MAP1LC3A-203ENST00000397709 ISLRO14498 428 aa14.53□□□□□ -0.08
MAP1LC3A-203ENST00000397709 PSMB3P49720 205 aa14.53□□□□□ -0.08
MAP1LC3A-203ENST00000397709 BLOC1S1P78537 153 aa14.53□□□□□ -0.08
MAP1LC3A-203ENST00000397709 LRRC20Q8TCA0 184 aa14.53□□□□□ -0.08
MAP1LC3A-203ENST00000397709 ZNF331Q9NQX6 463 aaPredicted RBP14.53□□□□□ -0.08
MAP1LC3A-203ENST00000397709 ID1P41134 155 aa14.52□□□□□ -0.09
MAP1LC3A-203ENST00000397709 IQCF2Q8IXL9 164 aa14.52□□□□□ -0.09
MAP1LC3A-203ENST00000397709 A0A1B0GV50 99 aa14.51□□□□□ -0.09
MAP1LC3A-203ENST00000397709 HBE1P02100 147 aa14.51□□□□□ -0.09
MAP1LC3A-203ENST00000397709 CD7P09564 240 aa14.51□□□□□ -0.09
MAP1LC3A-203ENST00000397709 ZNF688P0C7X2 276 aa14.51□□□□□ -0.09
MAP1LC3A-203ENST00000397709 PSG9Q00887 426 aa14.51□□□□□ -0.09
MAP1LC3A-203ENST00000397709 ODF3L2Q3SX64 289 aa14.51□□□□□ -0.09
MAP1LC3A-203ENST00000397709 IGFL4Q6B9Z1 124 aa14.51□□□□□ -0.09
MAP1LC3A-203ENST00000397709 C20orf173Q96LM9 149 aa14.51□□□□□ -0.09
MAP1LC3A-203ENST00000397709 FAM110AQ9BQ89 295 aa14.51□□□□□ -0.09
MAP1LC3A-203ENST00000397709 TEX46H3BTG2 121 aa14.5□□□□□ -0.09
MAP1LC3A-203ENST00000397709 CD81P60033 236 aa14.5□□□□□ -0.09
MAP1LC3A-203ENST00000397709 SNRPD3P62318 126 aaKnown RBP14.5□□□□□ -0.09
MAP1LC3A-203ENST00000397709 ZNF767PQ75MW2 155 aa14.5□□□□□ -0.09
MAP1LC3A-203ENST00000397709 LYPD6BQ8NI32 183 aa14.5□□□□□ -0.09
MAP1LC3A-203ENST00000397709 PRR25Q96S07 402 aa14.5□□□□□ -0.09
MAP1LC3A-203ENST00000397709 MAP6D1Q9H9H5 199 aa14.5□□□□□ -0.09
MAP1LC3A-203ENST00000397709 C19orf73Q9NVV2 129 aa14.5□□□□□ -0.09
MAP1LC3A-203ENST00000397709 HLA-DMBP28068 263 aa14.49□□□□□ -0.09
MAP1LC3A-203ENST00000397709 CMC4P56277 68 aaPredicted RBP14.49□□□□□ -0.09
MAP1LC3A-203ENST00000397709 CCL20P78556 96 aa14.49□□□□□ -0.09
MAP1LC3A-203ENST00000397709 GTSCR1Q86UQ5 136 aa14.49□□□□□ -0.09
MAP1LC3A-203ENST00000397709 LYPD1Q8N2G4 141 aa14.49□□□□□ -0.09
MAP1LC3A-203ENST00000397709 RNF182Q8N6D2 247 aa14.49□□□□□ -0.09
MAP1LC3A-203ENST00000397709 Q9H3A6 140 aa14.49□□□□□ -0.09
MAP1LC3A-203ENST00000397709 CLEC5AQ9NY25 188 aa14.49□□□□□ -0.09
MAP1LC3A-203ENST00000397709 RANP62826 216 aaKnown RBP14.48□□□□□ -0.09
MAP1LC3A-203ENST00000397709 PSMG4Q5JS54 123 aa14.48□□□□□ -0.09
MAP1LC3A-203ENST00000397709 EXOC3-AS1Q8N2X6 119 aa14.48□□□□□ -0.09
MAP1LC3A-203ENST00000397709 LINC00052Q96N35 136 aa14.48□□□□□ -0.09
MAP1LC3A-203ENST00000397709 NBEAL1Q6ZS30 2694 aa14.47□□□□□ -0.09
MAP1LC3A-203ENST00000397709 A0A1W2PRE2 83 aa14.47□□□□□ -0.09
MAP1LC3A-203ENST00000397709 OR11H12B2RN74 326 aa14.47□□□□□ -0.09
MAP1LC3A-203ENST00000397709 NMBP08949 121 aa14.47□□□□□ -0.09
MAP1LC3A-203ENST00000397709 PPT1P50897 306 aa14.47□□□□□ -0.09
MAP1LC3A-203ENST00000397709 DEFB131AP59861 70 aa14.47□□□□□ -0.09
MAP1LC3A-203ENST00000397709 PSG3Q16557 428 aa14.47□□□□□ -0.09
MAP1LC3A-203ENST00000397709 Q8N1Y9 231 aa14.47□□□□□ -0.09
MAP1LC3A-203ENST00000397709 MRPL53Q96EL3 112 aaKnown RBP14.47□□□□□ -0.09
MAP1LC3A-203ENST00000397709 AAMDCQ9H7C9 122 aa14.47□□□□□ -0.09
MAP1LC3A-203ENST00000397709 OTORQ9NRC9 128 aa14.47□□□□□ -0.09
MAP1LC3A-203ENST00000397709 PRELID1Q9Y255 219 aa14.47□□□□□ -0.09
MAP1LC3A-203ENST00000397709 YTHDF2Q9Y5A9 579 aaKnown RBP14.47□□□□□ -0.09
MAP1LC3A-203ENST00000397709 ARL2-SNX15V9GYD0 113 aa14.47□□□□□ -0.09
MAP1LC3A-203ENST00000397709 FAM74A7A6NL05 159 aa14.46□□□□□ -0.09
MAP1LC3A-203ENST00000397709 UBE2G2P60604 165 aa14.46□□□□□ -0.09
MAP1LC3A-203ENST00000397709 PMS2P11Q13670 270 aa14.46□□□□□ -0.09
MAP1LC3A-203ENST00000397709 ICAM4Q14773 271 aa14.46□□□□□ -0.09
MAP1LC3A-203ENST00000397709 PCNPQ8WW12 178 aaKnown RBP14.46□□□□□ -0.09
MAP1LC3A-203ENST00000397709 NOTCH1P46531 2555 aa14.45□□□□□ -0.1
MAP1LC3A-203ENST00000397709 ZNF738Q8NE65 137 aa14.45□□□□□ -0.1
MAP1LC3A-203ENST00000397709 WFDC10AQ9H1F0 79 aa14.45□□□□□ -0.1
MAP1LC3A-203ENST00000397709 PGPA6NDG6 321 aa14.44□□□□□ -0.1
MAP1LC3A-203ENST00000397709 GGTLC3B5MD39 225 aa14.44□□□□□ -0.1
MAP1LC3A-203ENST00000397709 M0R3E3 92 aa14.44□□□□□ -0.1
MAP1LC3A-203ENST00000397709 ZNF124Q15973 351 aa14.44□□□□□ -0.1
MAP1LC3A-203ENST00000397709 APRG1Q8IVJ8 170 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms