RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 RPL23P62829 140 aaKnown RBP6.5□□□□□ -1.37
PTPRD-204ENST00000397606 PRR20EP86478 221 aa6.5□□□□□ -1.37
PTPRD-204ENST00000397606 PRR20CP86479 221 aa6.5□□□□□ -1.37
PTPRD-204ENST00000397606 PRR20DP86480 221 aa6.5□□□□□ -1.37
PTPRD-204ENST00000397606 PRR20BP86481 221 aa6.5□□□□□ -1.37
PTPRD-204ENST00000397606 PRR20AP86496 221 aa6.5□□□□□ -1.37
PTPRD-204ENST00000397606 ZNF491Q8N8L2 437 aa6.5□□□□□ -1.37
PTPRD-204ENST00000397606 SELENOKQ9Y6D0 94 aa6.5□□□□□ -1.37
PTPRD-204ENST00000397606 PRRC2CQ9Y520 2896 aaKnown RBP6.5□□□□□ -1.37
PTPRD-204ENST00000397606 VWC2LB2RUY7 222 aa6.5□□□□□ -1.37
PTPRD-204ENST00000397606 H3BRN7 92 aa6.5□□□□□ -1.37
PTPRD-204ENST00000397606 CKS2P33552 79 aa6.5□□□□□ -1.37
PTPRD-204ENST00000397606 IGKV2-40A0A087WW87 121 aaPredicted RBP6.5□□□□□ -1.37
PTPRD-204ENST00000397606 IGKV2D-40P01614 121 aaPredicted RBP6.5□□□□□ -1.37
PTPRD-204ENST00000397606 P0C879 139 aa6.5□□□□□ -1.37
PTPRD-204ENST00000397606 PMCHP20382 165 aa6.5□□□□□ -1.37
PTPRD-204ENST00000397606 G0S2P27469 103 aa6.5□□□□□ -1.37
PTPRD-204ENST00000397606 FCER1GP30273 86 aa6.5□□□□□ -1.37
PTPRD-204ENST00000397606 IL36BQ9NZH7 164 aa6.5□□□□□ -1.37
PTPRD-204ENST00000397606 TMEM14CQ9P0S9 112 aa6.5□□□□□ -1.37
PTPRD-204ENST00000397606 USP9XQ93008 2570 aaPredicted RBP6.49□□□□□ -1.37
PTPRD-204ENST00000397606 IGHV7-4-1A0A0J9YVY3 117 aa6.49□□□□□ -1.37
PTPRD-204ENST00000397606 CLPSL1A2RUU4 121 aa6.49□□□□□ -1.37
PTPRD-204ENST00000397606 TNRC18O15417 2968 aaPredicted RBP6.49□□□□□ -1.37
PTPRD-204ENST00000397606 FCN3O75636 299 aa6.49□□□□□ -1.37
PTPRD-204ENST00000397606 HOXD3P31249 432 aaPredicted RBP6.49□□□□□ -1.37
PTPRD-204ENST00000397606 BRWD1-AS2P59051 145 aa6.49□□□□□ -1.37
PTPRD-204ENST00000397606 EIF4EBP1Q13541 118 aaPredicted RBP6.49□□□□□ -1.37
PTPRD-204ENST00000397606 OSTCQ9NRP0 149 aa6.49□□□□□ -1.37
PTPRD-204ENST00000397606 LSM4Q9Y4Z0 139 aaKnown RBP6.49□□□□□ -1.37
PTPRD-204ENST00000397606 SOX21Q9Y651 276 aaPredicted RBP6.49□□□□□ -1.37
PTPRD-204ENST00000397606 UNC80Q8N2C7 3258 aa6.49□□□□□ -1.37
PTPRD-204ENST00000397606 CCL24O00175 119 aa6.49□□□□□ -1.37
PTPRD-204ENST00000397606 RNF224P0DH78 156 aa6.49□□□□□ -1.37
PTPRD-204ENST00000397606 C1QTNF4Q9BXJ3 329 aa6.49□□□□□ -1.37
PTPRD-204ENST00000397606 TRBV19A0A075B6N1 114 aa6.49□□□□□ -1.37
PTPRD-204ENST00000397606 A0A1B0GUT8 65 aa6.49□□□□□ -1.37
PTPRD-204ENST00000397606 C9JCJ5 164 aa6.49□□□□□ -1.37
PTPRD-204ENST00000397606 HBBP68871 147 aa6.49□□□□□ -1.37
PTPRD-204ENST00000397606 ACTL10Q5JWF8 245 aa6.49□□□□□ -1.37
PTPRD-204ENST00000397606 C11orf42Q8N5U0 333 aa6.49□□□□□ -1.37
PTPRD-204ENST00000397606 FER1L6-AS1Q8NA97 138 aa6.49□□□□□ -1.37
PTPRD-204ENST00000397606 YTHDF2Q9Y5A9 579 aaKnown RBP6.49□□□□□ -1.37
PTPRD-204ENST00000397606 TRBV9A0A0B4J1U6 114 aa6.49□□□□□ -1.37
PTPRD-204ENST00000397606 A0A1B0GW15 77 aa6.49□□□□□ -1.37
PTPRD-204ENST00000397606 M0R381 172 aa6.49□□□□□ -1.37
PTPRD-204ENST00000397606 SMAGPQ0VAQ4 97 aa6.49□□□□□ -1.37
PTPRD-204ENST00000397606 OCC1Q8TAD7 63 aa6.49□□□□□ -1.37
PTPRD-204ENST00000397606 PSMG3-AS1Q96PY0 264 aa6.49□□□□□ -1.37
PTPRD-204ENST00000397606 A0A087WWC5 75 aa6.48□□□□□ -1.37
PTPRD-204ENST00000397606 CD7P09564 240 aa6.48□□□□□ -1.37
PTPRD-204ENST00000397606 ZNF343Q6P1L6 599 aa6.48□□□□□ -1.37
PTPRD-204ENST00000397606 C1orf229Q6ZS94 237 aaPredicted RBP6.48□□□□□ -1.37
PTPRD-204ENST00000397606 TRGV11A0A075B6L2 103 aa6.48□□□□□ -1.37
PTPRD-204ENST00000397606 M0R3E3 92 aa6.48□□□□□ -1.37
PTPRD-204ENST00000397606 SLC17A3O00476 420 aa6.48□□□□□ -1.37
PTPRD-204ENST00000397606 DEFB131AP59861 70 aa6.48□□□□□ -1.37
PTPRD-204ENST00000397606 SRSF3P84103 164 aaKnown RBP6.48□□□□□ -1.37
PTPRD-204ENST00000397606 MUC21Q5SSG8 566 aa6.48□□□□□ -1.37
PTPRD-204ENST00000397606 INAFM1C9JVW0 142 aa6.48□□□□□ -1.37
PTPRD-204ENST00000397606 FABP4P15090 132 aa6.48□□□□□ -1.37
PTPRD-204ENST00000397606 FAM74A4Q5TZK3 123 aa6.48□□□□□ -1.37
PTPRD-204ENST00000397606 SMPXQ9UHP9 88 aa6.48□□□□□ -1.37
PTPRD-204ENST00000397606 TRAV9-1A0A075B6T8 112 aa6.48□□□□□ -1.37
PTPRD-204ENST00000397606 GRIFINA4D1Z8 144 aa6.48□□□□□ -1.37
PTPRD-204ENST00000397606 E7EUB6 86 aa6.48□□□□□ -1.37
PTPRD-204ENST00000397606 LY6G6DO95868 133 aa6.48□□□□□ -1.37
PTPRD-204ENST00000397606 IGKV1-17P01599 117 aa6.48□□□□□ -1.37
PTPRD-204ENST00000397606 IGF1P05019 195 aa6.48□□□□□ -1.37
PTPRD-204ENST00000397606 FOSL1P15407 271 aa6.48□□□□□ -1.37
PTPRD-204ENST00000397606 AMTP48728 403 aa6.48□□□□□ -1.37
PTPRD-204ENST00000397606 ZNF56Q15929 161 aa6.48□□□□□ -1.37
PTPRD-204ENST00000397606 C8orf86Q6ZUL3 223 aa6.48□□□□□ -1.37
PTPRD-204ENST00000397606 NEU1Q99519 415 aa6.48□□□□□ -1.37
PTPRD-204ENST00000397606 SLC25A2Q9BXI2 301 aa6.48□□□□□ -1.37
PTPRD-204ENST00000397606 H7C1H1 209 aa6.47□□□□□ -1.37
PTPRD-204ENST00000397606 CTSGP08311 255 aa6.47□□□□□ -1.37
PTPRD-204ENST00000397606 TMEM183BQ1AE95 376 aa6.47□□□□□ -1.37
PTPRD-204ENST00000397606 RNASE7Q9H1E1 156 aaKnown RBP6.47□□□□□ -1.37
PTPRD-204ENST00000397606 LY96Q9Y6Y9 160 aa6.47□□□□□ -1.37
PTPRD-204ENST00000397606 ABCA2Q9BZC7 2435 aa6.47□□□□□ -1.37
PTPRD-204ENST00000397606 TLN2Q9Y4G6 2542 aa6.47□□□□□ -1.37
PTPRD-204ENST00000397606 MYO9AB2RTY4 2548 aa6.47□□□□□ -1.37
PTPRD-204ENST00000397606 NPIPB6E9PJ23 425 aa6.47□□□□□ -1.37
PTPRD-204ENST00000397606 KRTDAPP60985 99 aa6.47□□□□□ -1.37
PTPRD-204ENST00000397606 IGFL4Q6B9Z1 124 aa6.47□□□□□ -1.37
PTPRD-204ENST00000397606 PPP1R17O96001 155 aa6.47□□□□□ -1.37
PTPRD-204ENST00000397606 FOLR2P14207 255 aa6.47□□□□□ -1.37
PTPRD-204ENST00000397606 FBLN7Q53RD9 439 aa6.47□□□□□ -1.37
PTPRD-204ENST00000397606 TRIOO75962 3097 aa6.46□□□□□ -1.37
PTPRD-204ENST00000397606 TSTD3H0UI37 97 aa6.46□□□□□ -1.37
PTPRD-204ENST00000397606 SSBP2P81877 361 aaPredicted RBP6.46□□□□□ -1.37
PTPRD-204ENST00000397606 MRPL18Q9H0U6 180 aaKnown RBP6.46□□□□□ -1.37
PTPRD-204ENST00000397606 TGIF2-C20orf24A0A0A6YYL0 155 aa6.46□□□□□ -1.38
PTPRD-204ENST00000397606 PGPEP1LA6NFU8 196 aa6.46□□□□□ -1.38
PTPRD-204ENST00000397606 HIGD1CA8MV81 97 aa6.46□□□□□ -1.38
PTPRD-204ENST00000397606 AMBPP02760 352 aa6.46□□□□□ -1.38
PTPRD-204ENST00000397606 TRGV2A0A075B6R0 118 aa6.46□□□□□ -1.38
PTPRD-204ENST00000397606 CRYGBP07316 175 aa6.46□□□□□ -1.38
PTPRD-204ENST00000397606 DEFB136Q30KP8 78 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms