RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 BCL2P10415 239 aa12.8□□□□□ -0.36
TSPAN4-205ENST00000397406 BMI1P35226 326 aa12.8□□□□□ -0.36
TSPAN4-205ENST00000397406 GALR1P47211 349 aa12.8□□□□□ -0.36
TSPAN4-205ENST00000397406 UBE2G2P60604 165 aa12.8□□□□□ -0.36
TSPAN4-205ENST00000397406 TOR2AQ5JU69 321 aa12.8□□□□□ -0.36
TSPAN4-205ENST00000397406 ZNF506Q5JVG8 444 aa12.8□□□□□ -0.36
TSPAN4-205ENST00000397406 SLC7A5P1Q8MH63 180 aa12.8□□□□□ -0.36
TSPAN4-205ENST00000397406 BLNKQ8WV28 456 aa12.8□□□□□ -0.36
TSPAN4-205ENST00000397406 RARRES2Q99969 163 aa12.8□□□□□ -0.36
TSPAN4-205ENST00000397406 YTHDF2Q9Y5A9 579 aaKnown RBP12.8□□□□□ -0.36
TSPAN4-205ENST00000397406 ARL2-SNX15V9GYD0 113 aa12.8□□□□□ -0.36
TSPAN4-205ENST00000397406 FAM74A7A6NL05 159 aa12.79□□□□□ -0.36
TSPAN4-205ENST00000397406 H3BTX0 84 aa12.79□□□□□ -0.36
TSPAN4-205ENST00000397406 NDUFB4O95168 129 aa12.79□□□□□ -0.36
TSPAN4-205ENST00000397406 ATF4P18848 351 aaPredicted RBP12.79□□□□□ -0.36
TSPAN4-205ENST00000397406 SRSF3P84103 164 aaKnown RBP12.79□□□□□ -0.36
TSPAN4-205ENST00000397406 ICAM4Q14773 271 aa12.79□□□□□ -0.36
TSPAN4-205ENST00000397406 EIF4E3Q8N5X7 224 aaKnown RBP12.79□□□□□ -0.36
TSPAN4-205ENST00000397406 LINC00482Q8N8I6 264 aa12.79□□□□□ -0.36
TSPAN4-205ENST00000397406 MLXQ9UH92 298 aa12.79□□□□□ -0.36
TSPAN4-205ENST00000397406 TGP01266 2768 aa12.79□□□□□ -0.36
TSPAN4-205ENST00000397406 A0A1W2PRE2 83 aa12.79□□□□□ -0.36
TSPAN4-205ENST00000397406 G3V4G9 280 aa12.79□□□□□ -0.36
TSPAN4-205ENST00000397406 SLC17A3O00476 420 aa12.79□□□□□ -0.36
TSPAN4-205ENST00000397406 PF4P02776 101 aa12.79□□□□□ -0.36
TSPAN4-205ENST00000397406 FAM90A2PQ658T7 463 aa12.79□□□□□ -0.36
TSPAN4-205ENST00000397406 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.79□□□□□ -0.36
TSPAN4-205ENST00000397406 EIF5A2Q9GZV4 153 aaKnown RBP12.79□□□□□ -0.36
TSPAN4-205ENST00000397406 VAX2Q9UIW0 290 aa12.79□□□□□ -0.36
TSPAN4-205ENST00000397406 ZNF785A8K8V0 405 aa12.78□□□□□ -0.36
TSPAN4-205ENST00000397406 CD5P06127 495 aa12.78□□□□□ -0.36
TSPAN4-205ENST00000397406 TAGLN2P37802 199 aaKnown RBP12.78□□□□□ -0.36
TSPAN4-205ENST00000397406 ATP5G3P48201 142 aa12.78□□□□□ -0.36
TSPAN4-205ENST00000397406 PDE6HQ13956 83 aa12.78□□□□□ -0.36
TSPAN4-205ENST00000397406 TCF24Q7RTU0 167 aa12.78□□□□□ -0.36
TSPAN4-205ENST00000397406 SIGLEC8Q9NYZ4 499 aa12.78□□□□□ -0.36
TSPAN4-205ENST00000397406 SELENOKQ9Y6D0 94 aa12.78□□□□□ -0.36
TSPAN4-205ENST00000397406 HELTA6NFD8 242 aa12.77□□□□□ -0.37
TSPAN4-205ENST00000397406 GGTLC3B5MD39 225 aa12.77□□□□□ -0.37
TSPAN4-205ENST00000397406 ZNF253O75346 499 aa12.77□□□□□ -0.37
TSPAN4-205ENST00000397406 MEF2BQ02080 365 aaPredicted RBP12.77□□□□□ -0.37
TSPAN4-205ENST00000397406 RXFP4Q8TDU9 374 aa12.77□□□□□ -0.37
TSPAN4-205ENST00000397406 C9JQL5 133 aa12.76□□□□□ -0.37
TSPAN4-205ENST00000397406 C11orf94C9JXX5 98 aa12.76□□□□□ -0.37
TSPAN4-205ENST00000397406 MEOX2P50222 304 aa12.76□□□□□ -0.37
TSPAN4-205ENST00000397406 CD81P60033 236 aa12.76□□□□□ -0.37
TSPAN4-205ENST00000397406 RANP62826 216 aaKnown RBP12.76□□□□□ -0.37
TSPAN4-205ENST00000397406 PEA15Q15121 130 aa12.76□□□□□ -0.37
TSPAN4-205ENST00000397406 BEAN1Q3B7T3 259 aa12.76□□□□□ -0.37
TSPAN4-205ENST00000397406 SAMD5Q5TGI4 173 aa12.76□□□□□ -0.37
TSPAN4-205ENST00000397406 CST9LP1Q5W188 147 aa12.76□□□□□ -0.37
TSPAN4-205ENST00000397406 UQCC3Q6UW78 93 aa12.76□□□□□ -0.37
TSPAN4-205ENST00000397406 CCDC28AQ8IWP9 274 aa12.76□□□□□ -0.37
TSPAN4-205ENST00000397406 Q9H3A6 140 aa12.76□□□□□ -0.37
TSPAN4-205ENST00000397406 LYPD1Q8N2G4 141 aa12.75□□□□□ -0.37
TSPAN4-205ENST00000397406 TXNDC17Q9BRA2 123 aa12.75□□□□□ -0.37
TSPAN4-205ENST00000397406 SMDT1Q9H4I9 107 aa12.75□□□□□ -0.37
TSPAN4-205ENST00000397406 NRN1Q9NPD7 142 aa12.75□□□□□ -0.37
TSPAN4-205ENST00000397406 ZNF331Q9NQX6 463 aaPredicted RBP12.75□□□□□ -0.37
TSPAN4-205ENST00000397406 SOCS3O14543 225 aa12.74□□□□□ -0.37
TSPAN4-205ENST00000397406 SUMO1P63165 101 aaKnown RBP12.74□□□□□ -0.37
TSPAN4-205ENST00000397406 DEFB114Q30KQ6 69 aa12.74□□□□□ -0.37
TSPAN4-205ENST00000397406 KPRPQ5T749 579 aaPredicted RBP12.74□□□□□ -0.37
TSPAN4-205ENST00000397406 EXOC3-AS1Q8N2X6 119 aa12.74□□□□□ -0.37
TSPAN4-205ENST00000397406 NKX6-2Q9C056 277 aaPredicted RBP12.74□□□□□ -0.37
TSPAN4-205ENST00000397406 OTORQ9NRC9 128 aa12.74□□□□□ -0.37
TSPAN4-205ENST00000397406 PGPA6NDG6 321 aa12.73□□□□□ -0.37
TSPAN4-205ENST00000397406 NDUFS6O75380 124 aaKnown RBP12.73□□□□□ -0.37
TSPAN4-205ENST00000397406 PRB2P02812 416 aaPredicted RBP12.73□□□□□ -0.37
TSPAN4-205ENST00000397406 SRP19P09132 144 aaKnown RBP12.73□□□□□ -0.37
TSPAN4-205ENST00000397406 RPL11P62913 178 aaKnown RBP12.73□□□□□ -0.37
TSPAN4-205ENST00000397406 PSG9Q00887 426 aa12.73□□□□□ -0.37
TSPAN4-205ENST00000397406 DYNLRB2Q8TF09 96 aa12.73□□□□□ -0.37
TSPAN4-205ENST00000397406 SLC50A1Q9BRV3 221 aa12.73□□□□□ -0.37
TSPAN4-205ENST00000397406 TREM1Q9NP99 234 aa12.73□□□□□ -0.37
TSPAN4-205ENST00000397406 DNAH3Q8TD57 4116 aa12.73□□□□□ -0.37
TSPAN4-205ENST00000397406 IGKV3-7A0A075B6H7 116 aa12.72□□□□□ -0.37
TSPAN4-205ENST00000397406 TRAV8-2A0A0B4J237 113 aa12.72□□□□□ -0.37
TSPAN4-205ENST00000397406 DCANP1Q8TF63 244 aa12.72□□□□□ -0.37
TSPAN4-205ENST00000397406 CITED4Q96RK1 184 aa12.72□□□□□ -0.37
TSPAN4-205ENST00000397406 MS4A6AQ9H2W1 248 aa12.72□□□□□ -0.37
TSPAN4-205ENST00000397406 PDE6DO43924 150 aa12.71□□□□□ -0.37
TSPAN4-205ENST00000397406 HLA-DMBP28068 263 aa12.71□□□□□ -0.37
TSPAN4-205ENST00000397406 OXLD1Q5BKU9 147 aa12.71□□□□□ -0.37
TSPAN4-205ENST00000397406 IGFL4Q6B9Z1 124 aa12.71□□□□□ -0.37
TSPAN4-205ENST00000397406 TMEM61Q8N0U2 210 aa12.71□□□□□ -0.37
TSPAN4-205ENST00000397406 AAMDCQ9H7C9 122 aa12.71□□□□□ -0.37
TSPAN4-205ENST00000397406 F6UZH7 168 aa12.71□□□□□ -0.38
TSPAN4-205ENST00000397406 TSPAN4O14817 238 aa12.71□□□□□ -0.38
TSPAN4-205ENST00000397406 SAP30O75446 220 aa12.71□□□□□ -0.38
TSPAN4-205ENST00000397406 CD300EQ496F6 205 aaPredicted RBP12.71□□□□□ -0.38
TSPAN4-205ENST00000397406 GBGT1Q8N5D6 347 aa12.71□□□□□ -0.38
TSPAN4-205ENST00000397406 C5orf17Q8NAS9 161 aa12.71□□□□□ -0.38
TSPAN4-205ENST00000397406 C11orf52Q96A22 123 aa12.71□□□□□ -0.38
TSPAN4-205ENST00000397406 SCO2A0A1W2PP80 73 aa12.7□□□□□ -0.38
TSPAN4-205ENST00000397406 TMEM250H0YL14 139 aa12.7□□□□□ -0.38
TSPAN4-205ENST00000397406 K7EQG2 157 aa12.7□□□□□ -0.38
TSPAN4-205ENST00000397406 M0R3E3 92 aa12.7□□□□□ -0.38
TSPAN4-205ENST00000397406 IGLV1-51P01701 117 aa12.7□□□□□ -0.38
TSPAN4-205ENST00000397406 SLC25A5P05141 298 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms