RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 MC5RP33032 325 aa7.31□□□□□ -1.24
CAPN3-206ENST00000397163 LYZP61626 148 aa7.31□□□□□ -1.24
CAPN3-206ENST00000397163 CCL8P80075 99 aa7.31□□□□□ -1.24
CAPN3-206ENST00000397163 LOXL1Q08397 574 aaPredicted RBP7.31□□□□□ -1.24
CAPN3-206ENST00000397163 PIP4P1Q86T03 277 aa7.31□□□□□ -1.24
CAPN3-206ENST00000397163 TRGV9Q99603 122 aa7.31□□□□□ -1.24
CAPN3-206ENST00000397163 PLXNB1O43157 2135 aa7.31□□□□□ -1.24
CAPN3-206ENST00000397163 PLCE1Q9P212 2302 aa7.31□□□□□ -1.24
CAPN3-206ENST00000397163 DSCAML1Q8TD84 2053 aa7.31□□□□□ -1.24
CAPN3-206ENST00000397163 IGHV3-72A0A0B4J1Y9 119 aa7.31□□□□□ -1.24
CAPN3-206ENST00000397163 TRAV17A0A0B4J275 112 aa7.31□□□□□ -1.24
CAPN3-206ENST00000397163 RIGQ13278 110 aa7.31□□□□□ -1.24
CAPN3-206ENST00000397163 ETDBQ3ZM63 59 aa7.31□□□□□ -1.24
CAPN3-206ENST00000397163 EXOC3-AS1Q8N2X6 119 aa7.31□□□□□ -1.24
CAPN3-206ENST00000397163 DEFB124Q8NES8 71 aa7.31□□□□□ -1.24
CAPN3-206ENST00000397163 ZNF747Q9BV97 191 aa7.31□□□□□ -1.24
CAPN3-206ENST00000397163 SPENQ96T58 3664 aaKnown RBP7.31□□□□□ -1.24
CAPN3-206ENST00000397163 A1L4Q6 167 aa7.31□□□□□ -1.24
CAPN3-206ENST00000397163 IGLV2-23P01705 113 aa7.31□□□□□ -1.24
CAPN3-206ENST00000397163 ARMS2P0C7Q2 107 aa7.31□□□□□ -1.24
CAPN3-206ENST00000397163 GATA3P23771 443 aa7.31□□□□□ -1.24
CAPN3-206ENST00000397163 CACNG7P62955 275 aa7.31□□□□□ -1.24
CAPN3-206ENST00000397163 ZNF474Q6S9Z5 364 aaPredicted RBP7.31□□□□□ -1.24
CAPN3-206ENST00000397163 AMTNQ6UX39 209 aa7.31□□□□□ -1.24
CAPN3-206ENST00000397163 C8orf46Q8TAG6 207 aa7.31□□□□□ -1.24
CAPN3-206ENST00000397163 OTORQ9NRC9 128 aa7.31□□□□□ -1.24
CAPN3-206ENST00000397163 HIGD1AQ9Y241 93 aa7.31□□□□□ -1.24
CAPN3-206ENST00000397163 INSIG2Q9Y5U4 225 aa7.31□□□□□ -1.24
CAPN3-206ENST00000397163 NPIPB6E9PJ23 425 aa7.3□□□□□ -1.24
CAPN3-206ENST00000397163 SRSF6Q13247 344 aaKnown RBP7.3□□□□□ -1.24
CAPN3-206ENST00000397163 TMEM200BQ69YZ2 307 aa7.3□□□□□ -1.24
CAPN3-206ENST00000397163 RITA1Q96K30 269 aa7.3□□□□□ -1.24
CAPN3-206ENST00000397163 FTH1P19P0C7X4 201 aa7.3□□□□□ -1.24
CAPN3-206ENST00000397163 PPIFP30405 207 aaKnown RBP7.3□□□□□ -1.24
CAPN3-206ENST00000397163 FXYD2P54710 66 aa7.3□□□□□ -1.24
CAPN3-206ENST00000397163 CD300EQ496F6 205 aaPredicted RBP7.3□□□□□ -1.24
CAPN3-206ENST00000397163 SEM1Q6ZVN7 128 aa7.3□□□□□ -1.24
CAPN3-206ENST00000397163 PIP4P2Q8N4L2 257 aa7.3□□□□□ -1.24
CAPN3-206ENST00000397163 OR5A1Q8NGJ0 315 aa7.3□□□□□ -1.24
CAPN3-206ENST00000397163 GEMIN7Q9H840 131 aaKnown RBP7.3□□□□□ -1.24
CAPN3-206ENST00000397163 CRYGCP07315 174 aa7.29□□□□□ -1.24
CAPN3-206ENST00000397163 WT1P19544 449 aaPredicted RBP7.29□□□□□ -1.24
CAPN3-206ENST00000397163 RPL27AP46776 148 aaKnown RBP7.29□□□□□ -1.24
CAPN3-206ENST00000397163 TEX36Q5VZQ5 186 aa7.29□□□□□ -1.24
CAPN3-206ENST00000397163 LCNL1Q6ZST4 164 aa7.29□□□□□ -1.24
CAPN3-206ENST00000397163 SS18L2Q9UHA2 77 aa7.29□□□□□ -1.24
CAPN3-206ENST00000397163 SERTM2A0A1B0GWG4 89 aa7.29□□□□□ -1.24
CAPN3-206ENST00000397163 TNFRSF1AP19438 455 aa7.29□□□□□ -1.24
CAPN3-206ENST00000397163 H3BMG7 143 aa7.29□□□□□ -1.24
CAPN3-206ENST00000397163 NHP2Q9NX24 153 aaKnown RBP7.29□□□□□ -1.24
CAPN3-206ENST00000397163 ROS1P08922 2347 aa7.28□□□□□ -1.24
CAPN3-206ENST00000397163 LOC400499M0QZD8 3231 aa7.28□□□□□ -1.24
CAPN3-206ENST00000397163 SMAD7O15105 426 aaKnown RBP7.28□□□□□ -1.24
CAPN3-206ENST00000397163 SMIM17P0DL12 118 aa7.28□□□□□ -1.24
CAPN3-206ENST00000397163 IFI27P40305 119 aaPredicted RBP7.28□□□□□ -1.24
CAPN3-206ENST00000397163 ZADH2Q8N4Q0 377 aa7.28□□□□□ -1.24
CAPN3-206ENST00000397163 ZNF48Q96MX3 618 aaPredicted RBP7.28□□□□□ -1.24
CAPN3-206ENST00000397163 SPAG8Q99932 426 aaPredicted RBP7.28□□□□□ -1.24
CAPN3-206ENST00000397163 SRSF8Q9BRL6 282 aaKnown RBP7.28□□□□□ -1.24
CAPN3-206ENST00000397163 RP1L1Q8IWN7 2480 aaPredicted RBP7.28□□□□□ -1.24
CAPN3-206ENST00000397163 IGLV2-11P01706 119 aa7.28□□□□□ -1.24
CAPN3-206ENST00000397163 RPRMLQ8N4K4 120 aa7.28□□□□□ -1.24
CAPN3-206ENST00000397163 ABHD17AQ96GS6 310 aa7.28□□□□□ -1.24
CAPN3-206ENST00000397163 SLC25A39Q9BZJ4 359 aaPredicted RBP7.28□□□□□ -1.24
CAPN3-206ENST00000397163 MBD3L4A6NDZ8 208 aaPredicted RBP7.27□□□□□ -1.24
CAPN3-206ENST00000397163 MBD3L3A6NE82 208 aaPredicted RBP7.27□□□□□ -1.24
CAPN3-206ENST00000397163 MBD3L5A6NJ08 208 aaPredicted RBP7.27□□□□□ -1.24
CAPN3-206ENST00000397163 RBP4P02753 201 aa7.27□□□□□ -1.24
CAPN3-206ENST00000397163 MBD3L2Q8NHZ7 208 aaPredicted RBP7.27□□□□□ -1.24
CAPN3-206ENST00000397163 RAI1Q7Z5J4 1906 aaPredicted RBP7.27□□□□□ -1.25
CAPN3-206ENST00000397163 NDUFB3O43676 98 aa7.27□□□□□ -1.25
CAPN3-206ENST00000397163 SMIM13P0DJ93 91 aa7.27□□□□□ -1.25
CAPN3-206ENST00000397163 SPANXB1Q9NS25 103 aaPredicted RBP7.27□□□□□ -1.25
CAPN3-206ENST00000397163 CSMD1Q96PZ7 3565 aa7.27□□□□□ -1.25
CAPN3-206ENST00000397163 TMSB15BA0A087X1C1 80 aa7.27□□□□□ -1.25
CAPN3-206ENST00000397163 CD40P25942 277 aa7.27□□□□□ -1.25
CAPN3-206ENST00000397163 CNTFRP26992 372 aa7.27□□□□□ -1.25
CAPN3-206ENST00000397163 FAM27E3Q08E93 113 aa7.27□□□□□ -1.25
CAPN3-206ENST00000397163 BCL6BQ8N143 479 aaPredicted RBP7.27□□□□□ -1.25
CAPN3-206ENST00000397163 CCL17Q92583 94 aa7.27□□□□□ -1.25
CAPN3-206ENST00000397163 C20orf78Q9BR46 151 aa7.27□□□□□ -1.25
CAPN3-206ENST00000397163 PSG8Q9UQ74 426 aa7.27□□□□□ -1.25
CAPN3-206ENST00000397163 KALRNO60229 2985 aa7.26□□□□□ -1.25
CAPN3-206ENST00000397163 ZNF785A8K8V0 405 aa7.26□□□□□ -1.25
CAPN3-206ENST00000397163 D6R8Y8 96 aa7.26□□□□□ -1.25
CAPN3-206ENST00000397163 SCGB1A1P11684 91 aa7.26□□□□□ -1.25
CAPN3-206ENST00000397163 MRGPRG-AS1Q2M3A8 158 aa7.26□□□□□ -1.25
CAPN3-206ENST00000397163 BOD1L2Q8IYS8 172 aa7.26□□□□□ -1.25
CAPN3-206ENST00000397163 C17orf77Q96MU5 243 aa7.26□□□□□ -1.25
CAPN3-206ENST00000397163 RASL11BQ9BPW5 248 aa7.26□□□□□ -1.25
CAPN3-206ENST00000397163 SPTBN2O15020 2390 aa7.26□□□□□ -1.25
CAPN3-206ENST00000397163 A0A1B0GW15 77 aa7.26□□□□□ -1.25
CAPN3-206ENST00000397163 FCN3O75636 299 aa7.26□□□□□ -1.25
CAPN3-206ENST00000397163 C22orf34Q6ZV56 151 aa7.26□□□□□ -1.25
CAPN3-206ENST00000397163 LINC00311Q8N616 119 aa7.26□□□□□ -1.25
CAPN3-206ENST00000397163 TMEM14CQ9P0S9 112 aa7.26□□□□□ -1.25
CAPN3-206ENST00000397163 OVOL3O00110 214 aa7.25□□□□□ -1.25
CAPN3-206ENST00000397163 CT45A10P0DMU9 189 aa7.25□□□□□ -1.25
CAPN3-206ENST00000397163 LYPD2Q6UXB3 125 aa7.25□□□□□ -1.25
CAPN3-206ENST00000397163 PRELID3AQ96N28 172 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms