RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 GPR82Q96P67 336 aa10.07□□□□□ -0.8
SEC13-209ENST00000397117 DUX3Q96PT4 197 aa10.07□□□□□ -0.8
SEC13-209ENST00000397117 B9D2Q9BPU9 175 aa10.07□□□□□ -0.8
SEC13-209ENST00000397117 IGHV3OR16-13A0A075B7E8 117 aa10.06□□□□□ -0.8
SEC13-209ENST00000397117 IGHV3-74A0A0B4J1X5 117 aa10.06□□□□□ -0.8
SEC13-209ENST00000397117 IGHV3-66A0A0C4DH42 116 aa10.06□□□□□ -0.8
SEC13-209ENST00000397117 TMEM218A2RU14 115 aa10.06□□□□□ -0.8
SEC13-209ENST00000397117 CCL24O00175 119 aa10.06□□□□□ -0.8
SEC13-209ENST00000397117 PAGE4O60829 102 aa10.06□□□□□ -0.8
SEC13-209ENST00000397117 APOHP02749 345 aaPredicted RBP10.06□□□□□ -0.8
SEC13-209ENST00000397117 BMI1P35226 326 aa10.06□□□□□ -0.8
SEC13-209ENST00000397117 KLF5Q13887 457 aaPredicted RBP10.06□□□□□ -0.8
SEC13-209ENST00000397117 CST9LP1Q5W188 147 aa10.06□□□□□ -0.8
SEC13-209ENST00000397117 FXYD5Q96DB9 178 aa10.06□□□□□ -0.8
SEC13-209ENST00000397117 RARRES2Q99969 163 aa10.06□□□□□ -0.8
SEC13-209ENST00000397117 TMEM231Q9H6L2 316 aa10.06□□□□□ -0.8
SEC13-209ENST00000397117 TREM1Q9NP99 234 aa10.06□□□□□ -0.8
SEC13-209ENST00000397117 IGHV7-4-1A0A0J9YVY3 117 aa10.05□□□□□ -0.8
SEC13-209ENST00000397117 LOC102723971A0A1B0GUV8 181 aa10.05□□□□□ -0.8
SEC13-209ENST00000397117 NBEAP1P0C6P0 100 aa10.05□□□□□ -0.8
SEC13-209ENST00000397117 HIST1H1EP10412 219 aaKnown RBP10.05□□□□□ -0.8
SEC13-209ENST00000397117 ATF4P18848 351 aaPredicted RBP10.05□□□□□ -0.8
SEC13-209ENST00000397117 GALR1P47211 349 aa10.05□□□□□ -0.8
SEC13-209ENST00000397117 ZNF506Q5JVG8 444 aa10.05□□□□□ -0.8
SEC13-209ENST00000397117 BLNKQ8WV28 456 aa10.05□□□□□ -0.8
SEC13-209ENST00000397117 SMDT1Q9H4I9 107 aa10.05□□□□□ -0.8
SEC13-209ENST00000397117 VAX2Q9UIW0 290 aa10.05□□□□□ -0.8
SEC13-209ENST00000397117 U3KQE9 123 aa10.05□□□□□ -0.8
SEC13-209ENST00000397117 A8MWP6 167 aa10.04□□□□□ -0.8
SEC13-209ENST00000397117 C9JQL5 133 aa10.04□□□□□ -0.8
SEC13-209ENST00000397117 PF4P02776 101 aa10.04□□□□□ -0.8
SEC13-209ENST00000397117 SNRPCP09234 159 aaKnown RBP10.04□□□□□ -0.8
SEC13-209ENST00000397117 BTN1A1Q13410 526 aa10.04□□□□□ -0.8
SEC13-209ENST00000397117 RXFP4Q8TDU9 374 aa10.04□□□□□ -0.8
SEC13-209ENST00000397117 ELOVL1Q9BW60 279 aa10.04□□□□□ -0.8
SEC13-209ENST00000397117 RHPN1-AS1Q9BWJ2 59 aa10.04□□□□□ -0.8
SEC13-209ENST00000397117 PEMTQ9UBM1 199 aa10.04□□□□□ -0.8
SEC13-209ENST00000397117 CARHSP1Q9Y2V2 147 aaKnown RBP10.04□□□□□ -0.8
SEC13-209ENST00000397117 ZNF785A8K8V0 405 aa10.04□□□□□ -0.8
SEC13-209ENST00000397117 C11orf94C9JXX5 98 aa10.04□□□□□ -0.8
SEC13-209ENST00000397117 APOC3P02656 99 aa10.04□□□□□ -0.8
SEC13-209ENST00000397117 ADCYAP1P18509 176 aa10.04□□□□□ -0.8
SEC13-209ENST00000397117 MEF2BQ02080 365 aaPredicted RBP10.04□□□□□ -0.8
SEC13-209ENST00000397117 FHL3Q13643 280 aa10.04□□□□□ -0.8
SEC13-209ENST00000397117 ICAM4Q14773 271 aa10.04□□□□□ -0.8
SEC13-209ENST00000397117 ATRAIDQ6UW56 229 aa10.04□□□□□ -0.8
SEC13-209ENST00000397117 C16orf54Q6UWD8 224 aa10.04□□□□□ -0.8
SEC13-209ENST00000397117 SMPXQ9UHP9 88 aa10.04□□□□□ -0.8
SEC13-209ENST00000397117 YTHDF2Q9Y5A9 579 aaKnown RBP10.04□□□□□ -0.8
SEC13-209ENST00000397117 ARL2-SNX15V9GYD0 113 aa10.04□□□□□ -0.8
SEC13-209ENST00000397117 A0A1W2PRE2 83 aa10.03□□□□□ -0.8
SEC13-209ENST00000397117 TMEM213A2RRL7 107 aa10.03□□□□□ -0.8
SEC13-209ENST00000397117 FAM74A7A6NL05 159 aa10.03□□□□□ -0.8
SEC13-209ENST00000397117 H3BQ15 152 aa10.03□□□□□ -0.8
SEC13-209ENST00000397117 DNASE2O00115 360 aaPredicted RBP10.03□□□□□ -0.8
SEC13-209ENST00000397117 MRPS12O15235 138 aaKnown RBP10.03□□□□□ -0.8
SEC13-209ENST00000397117 IGLC2P0DOY2 106 aa10.03□□□□□ -0.8
SEC13-209ENST00000397117 SIGLEC15Q6ZMC9 328 aa10.03□□□□□ -0.8
SEC13-209ENST00000397117 LINC00482Q8N8I6 264 aa10.03□□□□□ -0.8
SEC13-209ENST00000397117 OR9G4Q8NGQ1 327 aa10.03□□□□□ -0.8
SEC13-209ENST00000397117 DLX4Q92988 240 aaPredicted RBP10.03□□□□□ -0.8
SEC13-209ENST00000397117 TXNDC17Q9BRA2 123 aa10.03□□□□□ -0.8
SEC13-209ENST00000397117 NKX6-2Q9C056 277 aaPredicted RBP10.03□□□□□ -0.8
SEC13-209ENST00000397117 ZNF586Q9NXT0 402 aa10.03□□□□□ -0.8
SEC13-209ENST00000397117 HELTA6NFD8 242 aa10.02□□□□□ -0.81
SEC13-209ENST00000397117 C2orf70A6NJV1 201 aa10.02□□□□□ -0.81
SEC13-209ENST00000397117 H3BTX0 84 aa10.02□□□□□ -0.81
SEC13-209ENST00000397117 CHEK1O14757 476 aa10.02□□□□□ -0.81
SEC13-209ENST00000397117 SFTA3P0C7M3 94 aa10.02□□□□□ -0.81
SEC13-209ENST00000397117 RANP62826 216 aaKnown RBP10.02□□□□□ -0.81
SEC13-209ENST00000397117 RPL11P62913 178 aaKnown RBP10.02□□□□□ -0.81
SEC13-209ENST00000397117 GLMPQ8WWB7 406 aa10.02□□□□□ -0.81
SEC13-209ENST00000397117 TRBV19A0A075B6N1 114 aa10.01□□□□□ -0.81
SEC13-209ENST00000397117 CBLN1P23435 193 aa10.01□□□□□ -0.81
SEC13-209ENST00000397117 MYCNOSP40205 109 aa10.01□□□□□ -0.81
SEC13-209ENST00000397117 MEOX2P50222 304 aa10.01□□□□□ -0.81
SEC13-209ENST00000397117 PDE6HQ13956 83 aa10.01□□□□□ -0.81
SEC13-209ENST00000397117 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.01□□□□□ -0.81
SEC13-209ENST00000397117 SEC11CQ9BY50 192 aa10.01□□□□□ -0.81
SEC13-209ENST00000397117 GPR61Q9BZJ8 451 aa10.01□□□□□ -0.81
SEC13-209ENST00000397117 SLC35B3Q9H1N7 401 aa10.01□□□□□ -0.81
SEC13-209ENST00000397117 STAB2Q8WWQ8 2551 aa10.01□□□□□ -0.81
SEC13-209ENST00000397117 DYNC2H1Q8NCM8 4307 aaKnown RBP10.01□□□□□ -0.81
SEC13-209ENST00000397117 PDE6DO43924 150 aa10□□□□□ -0.81
SEC13-209ENST00000397117 FOLR2P14207 255 aa10□□□□□ -0.81
SEC13-209ENST00000397117 ATP5G3P48201 142 aa10□□□□□ -0.81
SEC13-209ENST00000397117 CEBPGP53567 150 aa10□□□□□ -0.81
SEC13-209ENST00000397117 CD81P60033 236 aa10□□□□□ -0.81
SEC13-209ENST00000397117 SUMO1P63165 101 aaKnown RBP10□□□□□ -0.81
SEC13-209ENST00000397117 SVBPQ8N300 66 aa10□□□□□ -0.81
SEC13-209ENST00000397117 C17orf77Q96MU5 243 aa10□□□□□ -0.81
SEC13-209ENST00000397117 SMAD5-AS1Q9Y6J3 95 aa10□□□□□ -0.81
SEC13-209ENST00000397117 A0A087X0K7 114 aa10□□□□□ -0.81
SEC13-209ENST00000397117 OVOL1O14753 267 aa10□□□□□ -0.81
SEC13-209ENST00000397117 NDUFS6O75380 124 aaKnown RBP10□□□□□ -0.81
SEC13-209ENST00000397117 SRP19P09132 144 aaKnown RBP10□□□□□ -0.81
SEC13-209ENST00000397117 NHLRC4P0CG21 123 aaPredicted RBP10□□□□□ -0.81
SEC13-209ENST00000397117 EDN2P20800 178 aa10□□□□□ -0.81
SEC13-209ENST00000397117 PSG9Q00887 426 aa10□□□□□ -0.81
SEC13-209ENST00000397117 LYPD1Q8N2G4 141 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms