RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 RIIAD1A6NNX1 92 aa0.38□□□□□ -2.35
CMC1-202ENST00000396610 ATP5HO75947 161 aa0.38□□□□□ -2.35
CMC1-202ENST00000396610 PHBP35232 272 aa0.38□□□□□ -2.35
CMC1-202ENST00000396610 ARPP19P56211 112 aa0.38□□□□□ -2.35
CMC1-202ENST00000396610 KLRD1Q13241 179 aa0.38□□□□□ -2.35
CMC1-202ENST00000396610 EIF3IQ13347 325 aaKnown RBP0.38□□□□□ -2.35
CMC1-202ENST00000396610 HACD4Q5VWC8 232 aa0.38□□□□□ -2.35
CMC1-202ENST00000396610 TMEM14EPQ6UXP3 125 aa0.38□□□□□ -2.35
CMC1-202ENST00000396610 LRRC18Q8N456 261 aa0.38□□□□□ -2.35
CMC1-202ENST00000396610 SSR3Q9UNL2 185 aa0.38□□□□□ -2.35
CMC1-202ENST00000396610 CITO14578 2027 aa0.38□□□□□ -2.35
CMC1-202ENST00000396610 ADGRL3Q9HAR2 1447 aa0.38□□□□□ -2.35
CMC1-202ENST00000396610 PCF11O94913 1555 aaKnown RBP0.37□□□□□ -2.35
CMC1-202ENST00000396610 KIF1BO60333 1816 aa0.37□□□□□ -2.35
CMC1-202ENST00000396610 hDV103S1A0JD37 113 aa0.37□□□□□ -2.35
CMC1-202ENST00000396610 RER1O15258 196 aa0.37□□□□□ -2.35
CMC1-202ENST00000396610 IFNA14P01570 189 aa0.37□□□□□ -2.35
CMC1-202ENST00000396610 PRH1P02810 166 aa0.37□□□□□ -2.35
CMC1-202ENST00000396610 TRGC2P03986 189 aa0.37□□□□□ -2.35
CMC1-202ENST00000396610 IFNA4P05014 189 aa0.37□□□□□ -2.35
CMC1-202ENST00000396610 OGNP20774 298 aaKnown RBP0.37□□□□□ -2.35
CMC1-202ENST00000396610 VBP1P61758 197 aa0.37□□□□□ -2.35
CMC1-202ENST00000396610 DHRS4L2Q6PKH6 230 aa0.37□□□□□ -2.35
CMC1-202ENST00000396610 PXT1Q8NFP0 134 aa0.37□□□□□ -2.35
CMC1-202ENST00000396610 GPX7Q96SL4 187 aaPredicted RBP0.37□□□□□ -2.35
CMC1-202ENST00000396610 LYRM2Q9NU23 88 aaPredicted RBP0.37□□□□□ -2.35
CMC1-202ENST00000396610 HSPB8Q9UJY1 196 aa0.37□□□□□ -2.35
CMC1-202ENST00000396610 K7EIL1 84 aa0.36□□□□□ -2.35
CMC1-202ENST00000396610 ATG12O94817 140 aa0.36□□□□□ -2.35
CMC1-202ENST00000396610 APOA2P02652 100 aa0.36□□□□□ -2.35
CMC1-202ENST00000396610 FXYD4P59646 89 aa0.36□□□□□ -2.35
CMC1-202ENST00000396610 CIRBPQ14011 172 aaKnown RBP0.36□□□□□ -2.35
CMC1-202ENST00000396610 MSMO1Q15800 293 aa0.36□□□□□ -2.35
CMC1-202ENST00000396610 SNCBQ16143 134 aa0.36□□□□□ -2.35
CMC1-202ENST00000396610 PBDC1Q9BVG4 233 aa0.36□□□□□ -2.35
CMC1-202ENST00000396610 MAP1LC3BQ9GZQ8 125 aa0.36□□□□□ -2.35
CMC1-202ENST00000396610 SH3BGRL3Q9H299 93 aa0.36□□□□□ -2.35
CMC1-202ENST00000396610 RNF11Q9Y3C5 154 aa0.36□□□□□ -2.35
CMC1-202ENST00000396610 ASB4Q9Y574 426 aa0.36□□□□□ -2.35
CMC1-202ENST00000396610 ALPK3Q96L96 1907 aa0.36□□□□□ -2.35
CMC1-202ENST00000396610 CEP164Q9UPV0 1460 aa0.35□□□□□ -2.35
CMC1-202ENST00000396610 FRAS1Q86XX4 4008 aa0.35□□□□□ -2.35
CMC1-202ENST00000396610 MYH7BA7E2Y1 1941 aa0.35□□□□□ -2.35
CMC1-202ENST00000396610 A0A096LPI6 279 aa0.35□□□□□ -2.35
CMC1-202ENST00000396610 TRAV5A0A0B4J249 113 aa0.35□□□□□ -2.35
CMC1-202ENST00000396610 TRBV30A0A0K0K1B3 111 aa0.35□□□□□ -2.35
CMC1-202ENST00000396610 ODAMA1E959 279 aa0.35□□□□□ -2.35
CMC1-202ENST00000396610 NUPR2A6NF83 97 aa0.35□□□□□ -2.35
CMC1-202ENST00000396610 K7ERJ3 54 aa0.35□□□□□ -2.35
CMC1-202ENST00000396610 LYRM1O43325 122 aa0.35□□□□□ -2.35
CMC1-202ENST00000396610 CD14P08571 375 aa0.35□□□□□ -2.35
CMC1-202ENST00000396610 ARF6P62330 175 aa0.35□□□□□ -2.35
CMC1-202ENST00000396610 ATOH7Q8N100 152 aa0.35□□□□□ -2.35
CMC1-202ENST00000396610 MALSU1Q96EH3 234 aa0.35□□□□□ -2.35
CMC1-202ENST00000396610 SMR3AQ99954 134 aa0.35□□□□□ -2.35
CMC1-202ENST00000396610 DOCK4Q8N1I0 1966 aa0.35□□□□□ -2.35
CMC1-202ENST00000396610 GPR98Q8WXG9 6306 aa0.35□□□□□ -2.35
CMC1-202ENST00000396610 C9orf170A2RU37 121 aa0.34□□□□□ -2.36
CMC1-202ENST00000396610 ZNF727A8MUV8 499 aa0.34□□□□□ -2.36
CMC1-202ENST00000396610 C5orf67F2Z3F1 127 aa0.34□□□□□ -2.36
CMC1-202ENST00000396610 HIST1H2BKO60814 126 aa0.34□□□□□ -2.36
CMC1-202ENST00000396610 HIST1H2BJP06899 126 aa0.34□□□□□ -2.36
CMC1-202ENST00000396610 PPP1R2P41236 205 aa0.34□□□□□ -2.36
CMC1-202ENST00000396610 FOXA3P55318 350 aaPredicted RBP0.34□□□□□ -2.36
CMC1-202ENST00000396610 NAV2Q8IVL1 2488 aa0.34□□□□□ -2.36
CMC1-202ENST00000396610 SS18L2Q9UHA2 77 aa0.34□□□□□ -2.36
CMC1-202ENST00000396610 KNTC1P50748 2209 aa0.34□□□□□ -2.36
CMC1-202ENST00000396610 MDN1Q9NU22 5596 aa0.34□□□□□ -2.36
CMC1-202ENST00000396610 IFNA1P01562 189 aa0.33□□□□□ -2.36
CMC1-202ENST00000396610 IDO1P14902 403 aa0.33□□□□□ -2.36
CMC1-202ENST00000396610 KDELR1P24390 212 aa0.33□□□□□ -2.36
CMC1-202ENST00000396610 SPINK7P58062 85 aa0.33□□□□□ -2.36
CMC1-202ENST00000396610 MRPS15P82914 257 aaKnown RBP0.33□□□□□ -2.36
CMC1-202ENST00000396610 MIR22HGQ0VDD5 57 aa0.33□□□□□ -2.36
CMC1-202ENST00000396610 OCIAD2Q56VL3 154 aa0.33□□□□□ -2.36
CMC1-202ENST00000396610 C1orf140Q5VVS0 124 aa0.33□□□□□ -2.36
CMC1-202ENST00000396610 FAM216BQ8N7L0 139 aa0.33□□□□□ -2.36
CMC1-202ENST00000396610 OR13C6PQ8NH95 151 aa0.33□□□□□ -2.36
CMC1-202ENST00000396610 BOKQ9UMX3 212 aaPredicted RBP0.33□□□□□ -2.36
CMC1-202ENST00000396610 SPTBP11277 2137 aa0.32□□□□□ -2.36
CMC1-202ENST00000396610 KMT2DO14686 5537 aa0.32□□□□□ -2.36
CMC1-202ENST00000396610 GPR31O00270 319 aa0.32□□□□□ -2.36
CMC1-202ENST00000396610 IGHV3-33P01772 117 aa0.32□□□□□ -2.36
CMC1-202ENST00000396610 ZNF137PP52743 207 aa0.32□□□□□ -2.36
CMC1-202ENST00000396610 HBBP68871 147 aa0.32□□□□□ -2.36
CMC1-202ENST00000396610 FOXI2Q6ZQN5 318 aa0.32□□□□□ -2.36
CMC1-202ENST00000396610 Q6ZS92 163 aa0.32□□□□□ -2.36
CMC1-202ENST00000396610 NUP35Q8NFH5 326 aa0.32□□□□□ -2.36
CMC1-202ENST00000396610 GINS3Q9BRX5 216 aa0.32□□□□□ -2.36
CMC1-202ENST00000396610 PLAC8Q9NZF1 115 aa0.32□□□□□ -2.36
CMC1-202ENST00000396610 MGAMO43451 1857 aa0.32□□□□□ -2.36
CMC1-202ENST00000396610 ZGRF1Q86YA3 2104 aa0.32□□□□□ -2.36
CMC1-202ENST00000396610 UHRF1BP1Q6BDS2 1440 aa0.31□□□□□ -2.36
CMC1-202ENST00000396610 MYO5AQ9Y4I1 1855 aaKnown RBP0.31□□□□□ -2.36
CMC1-202ENST00000396610 SPINT3P49223 89 aa0.31□□□□□ -2.36
CMC1-202ENST00000396610 RPL19P84098 196 aaKnown RBP0.31□□□□□ -2.36
CMC1-202ENST00000396610 C6orf52Q5T4I8 152 aa0.31□□□□□ -2.36
CMC1-202ENST00000396610 Q6ZQY7 126 aa0.31□□□□□ -2.36
CMC1-202ENST00000396610 PHF5AQ7RTV0 110 aaKnown RBP0.31□□□□□ -2.36
CMC1-202ENST00000396610 JPT1Q9UK76 154 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms