RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 EXOC3-AS1Q8N2X6 119 aa9.67□□□□□ -0.86
TRIM39-204ENST00000396548 IGF2BP2-AS1Q96M15 143 aa9.67□□□□□ -0.86
TRIM39-204ENST00000396548 NAT8Q9UHE5 227 aa9.67□□□□□ -0.86
TRIM39-204ENST00000396548 KLF12Q9Y4X4 402 aa9.67□□□□□ -0.86
TRIM39-204ENST00000396548 IGHV3-66A0A0C4DH42 116 aa9.67□□□□□ -0.86
TRIM39-204ENST00000396548 RPL35P42766 123 aaKnown RBP9.67□□□□□ -0.86
TRIM39-204ENST00000396548 HIST2H2BDQ6DRA6 164 aa9.67□□□□□ -0.86
TRIM39-204ENST00000396548 DAZ1Q9NQZ3 744 aaKnown RBP9.67□□□□□ -0.86
TRIM39-204ENST00000396548 TMEM213A2RRL7 107 aa9.67□□□□□ -0.86
TRIM39-204ENST00000396548 TMEM241Q24JQ0 296 aa9.67□□□□□ -0.86
TRIM39-204ENST00000396548 FAM106AQ4KMX7 169 aa9.67□□□□□ -0.86
TRIM39-204ENST00000396548 IGHV3-49A0A0A0MS15 119 aa9.66□□□□□ -0.86
TRIM39-204ENST00000396548 C9JCJ5 164 aa9.66□□□□□ -0.86
TRIM39-204ENST00000396548 DNASE2O00115 360 aaPredicted RBP9.66□□□□□ -0.86
TRIM39-204ENST00000396548 PEX7O00628 323 aa9.66□□□□□ -0.86
TRIM39-204ENST00000396548 CHEK1O14757 476 aa9.66□□□□□ -0.86
TRIM39-204ENST00000396548 HOXD3P31249 432 aaPredicted RBP9.66□□□□□ -0.86
TRIM39-204ENST00000396548 KRTAP10-3P60369 221 aa9.66□□□□□ -0.86
TRIM39-204ENST00000396548 RPL23P62829 140 aaKnown RBP9.66□□□□□ -0.86
TRIM39-204ENST00000396548 GNG5P63218 68 aa9.66□□□□□ -0.86
TRIM39-204ENST00000396548 SRSF2Q01130 221 aaKnown RBP9.66□□□□□ -0.86
TRIM39-204ENST00000396548 ZNF674Q2M3X9 581 aa9.66□□□□□ -0.86
TRIM39-204ENST00000396548 HIST1H2BAQ96A08 127 aa9.66□□□□□ -0.86
TRIM39-204ENST00000396548 SMPXQ9UHP9 88 aa9.66□□□□□ -0.86
TRIM39-204ENST00000396548 IGHV3OR16-13A0A075B7E8 117 aa9.66□□□□□ -0.86
TRIM39-204ENST00000396548 IGHV3-74A0A0B4J1X5 117 aa9.66□□□□□ -0.86
TRIM39-204ENST00000396548 IGLV2-8P01709 118 aa9.66□□□□□ -0.86
TRIM39-204ENST00000396548 PNRC1Q12796 327 aaPredicted RBP9.66□□□□□ -0.86
TRIM39-204ENST00000396548 RPEL1Q2QD12 228 aa9.66□□□□□ -0.86
TRIM39-204ENST00000396548 C5orf17Q8NAS9 161 aa9.66□□□□□ -0.86
TRIM39-204ENST00000396548 C7orf77A4D0Y5 90 aa9.65□□□□□ -0.86
TRIM39-204ENST00000396548 FHL3Q13643 280 aa9.65□□□□□ -0.86
TRIM39-204ENST00000396548 RHEBQ15382 184 aa9.65□□□□□ -0.86
TRIM39-204ENST00000396548 DEFB136Q30KP8 78 aa9.65□□□□□ -0.86
TRIM39-204ENST00000396548 ARL6IP6Q8N6S5 226 aa9.65□□□□□ -0.86
TRIM39-204ENST00000396548 LINC00479Q96M42 142 aa9.65□□□□□ -0.86
TRIM39-204ENST00000396548 ZNF331Q9NQX6 463 aaPredicted RBP9.65□□□□□ -0.86
TRIM39-204ENST00000396548 UFC1Q9Y3C8 167 aa9.65□□□□□ -0.86
TRIM39-204ENST00000396548 LY96Q9Y6Y9 160 aa9.65□□□□□ -0.86
TRIM39-204ENST00000396548 TRAV8-2A0A0B4J237 113 aa9.65□□□□□ -0.86
TRIM39-204ENST00000396548 ADARB2-AS1A8MUL3 147 aa9.65□□□□□ -0.86
TRIM39-204ENST00000396548 SOCS3O14543 225 aa9.65□□□□□ -0.86
TRIM39-204ENST00000396548 IGLV2-11P01706 119 aa9.65□□□□□ -0.86
TRIM39-204ENST00000396548 TCRAP04437 139 aa9.65□□□□□ -0.86
TRIM39-204ENST00000396548 ADAMTSL5Q6ZMM2 481 aa9.65□□□□□ -0.86
TRIM39-204ENST00000396548 LINC01551Q86U37 167 aa9.65□□□□□ -0.86
TRIM39-204ENST00000396548 C1QL4Q86Z23 238 aa9.65□□□□□ -0.86
TRIM39-204ENST00000396548 RNF114Q9Y508 228 aa9.65□□□□□ -0.86
TRIM39-204ENST00000396548 ZNF320A2RRD8 509 aa9.65□□□□□ -0.87
TRIM39-204ENST00000396548 CTAG1AP78358 180 aa9.65□□□□□ -0.87
TRIM39-204ENST00000396548 PSG9Q00887 426 aa9.65□□□□□ -0.87
TRIM39-204ENST00000396548 ATG101Q9BSB4 218 aa9.65□□□□□ -0.87
TRIM39-204ENST00000396548 A0A087WWC5 75 aa9.64□□□□□ -0.87
TRIM39-204ENST00000396548 HELTA6NFD8 242 aa9.64□□□□□ -0.87
TRIM39-204ENST00000396548 LINC01619G3V211 115 aa9.64□□□□□ -0.87
TRIM39-204ENST00000396548 K7EN84 100 aa9.64□□□□□ -0.87
TRIM39-204ENST00000396548 SLC25A5P05141 298 aaKnown RBP9.64□□□□□ -0.87
TRIM39-204ENST00000396548 GALR1P47211 349 aa9.64□□□□□ -0.87
TRIM39-204ENST00000396548 TMEM183BQ1AE95 376 aa9.64□□□□□ -0.87
TRIM39-204ENST00000396548 PGPEP1LA6NFU8 196 aa9.64□□□□□ -0.87
TRIM39-204ENST00000396548 B4DEV8 164 aa9.64□□□□□ -0.87
TRIM39-204ENST00000396548 SLURP1P55000 103 aa9.64□□□□□ -0.87
TRIM39-204ENST00000396548 KLHL30-AS1Q8NEE0 82 aa9.64□□□□□ -0.87
TRIM39-204ENST00000396548 OR11H1Q8NG94 326 aa9.64□□□□□ -0.87
TRIM39-204ENST00000396548 OR1N2Q8NGR9 330 aa9.64□□□□□ -0.87
TRIM39-204ENST00000396548 RAX2Q96IS3 184 aa9.64□□□□□ -0.87
TRIM39-204ENST00000396548 CITED2Q99967 270 aaPredicted RBP9.64□□□□□ -0.87
TRIM39-204ENST00000396548 RHPN1-AS1Q9BWJ2 59 aa9.64□□□□□ -0.87
TRIM39-204ENST00000396548 TRBV6-1A0A0K0K1D8 114 aa9.63□□□□□ -0.87
TRIM39-204ENST00000396548 SYNJ2BPP57105 145 aa9.63□□□□□ -0.87
TRIM39-204ENST00000396548 TAS2R60P59551 318 aa9.63□□□□□ -0.87
TRIM39-204ENST00000396548 BTN1A1Q13410 526 aa9.63□□□□□ -0.87
TRIM39-204ENST00000396548 OCC1Q8TAD7 63 aa9.63□□□□□ -0.87
TRIM39-204ENST00000396548 ZMAT5Q9UDW3 170 aaKnown RBP9.63□□□□□ -0.87
TRIM39-204ENST00000396548 A0A1W2PS18 150 aa9.63□□□□□ -0.87
TRIM39-204ENST00000396548 DIRC3C9JPN6 131 aa9.63□□□□□ -0.87
TRIM39-204ENST00000396548 ISLRO14498 428 aa9.63□□□□□ -0.87
TRIM39-204ENST00000396548 MEOX2P50222 304 aa9.63□□□□□ -0.87
TRIM39-204ENST00000396548 ISOC2Q96AB3 205 aa9.63□□□□□ -0.87
TRIM39-204ENST00000396548 TSSC4Q9Y5U2 329 aaPredicted RBP9.63□□□□□ -0.87
TRIM39-204ENST00000396548 M0R036 132 aa9.63□□□□□ -0.87
TRIM39-204ENST00000396548 CENPWQ5EE01 88 aa9.63□□□□□ -0.87
TRIM39-204ENST00000396548 C8orf86Q6ZUL3 223 aa9.63□□□□□ -0.87
TRIM39-204ENST00000396548 YPEL4Q96NS1 127 aa9.63□□□□□ -0.87
TRIM39-204ENST00000396548 HLA-DMBP28068 263 aa9.62□□□□□ -0.87
TRIM39-204ENST00000396548 AKR1C3P42330 323 aa9.62□□□□□ -0.87
TRIM39-204ENST00000396548 C2orf70A6NJV1 201 aa9.62□□□□□ -0.87
TRIM39-204ENST00000396548 ZNF785A8K8V0 405 aa9.62□□□□□ -0.87
TRIM39-204ENST00000396548 M0R3E3 92 aa9.62□□□□□ -0.87
TRIM39-204ENST00000396548 LTAP01374 205 aa9.62□□□□□ -0.87
TRIM39-204ENST00000396548 DUX3Q96PT4 197 aa9.62□□□□□ -0.87
TRIM39-204ENST00000396548 MLST8Q9BVC4 326 aa9.62□□□□□ -0.87
TRIM39-204ENST00000396548 NIPBLQ6KC79 2804 aaeCLIP9.62□□□□□ -0.87
TRIM39-204ENST00000396548 TRAV34A0A0B4J273 112 aa9.61□□□□□ -0.87
TRIM39-204ENST00000396548 FOXL1Q12952 345 aa9.61□□□□□ -0.87
TRIM39-204ENST00000396548 IGFL4Q6B9Z1 124 aa9.61□□□□□ -0.87
TRIM39-204ENST00000396548 CBLN2Q8IUK8 224 aa9.61□□□□□ -0.87
TRIM39-204ENST00000396548 TMEM75Q8N9X5 138 aa9.61□□□□□ -0.87
TRIM39-204ENST00000396548 FMC1Q96HJ9 113 aa9.61□□□□□ -0.87
TRIM39-204ENST00000396548 SLC50A1Q9BRV3 221 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms