RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 MYCNOSP40205 109 aa13.41□□□□□ -0.26
TNFSF13-205ENST00000396545 RPL35P42766 123 aaKnown RBP13.41□□□□□ -0.26
TNFSF13-205ENST00000396545 LYZP61626 148 aa13.41□□□□□ -0.26
TNFSF13-205ENST00000396545 SUMO1P63165 101 aaKnown RBP13.41□□□□□ -0.26
TNFSF13-205ENST00000396545 RHOGP84095 191 aa13.41□□□□□ -0.26
TNFSF13-205ENST00000396545 DEFB121Q5J5C9 76 aa13.41□□□□□ -0.26
TNFSF13-205ENST00000396545 PYGO2Q9BRQ0 406 aa13.41□□□□□ -0.26
TNFSF13-205ENST00000396545 TCEAL7Q9BRU2 100 aa13.41□□□□□ -0.26
TNFSF13-205ENST00000396545 ELOVL1Q9BW60 279 aa13.41□□□□□ -0.26
TNFSF13-205ENST00000396545 PPP1R2P9O14990 202 aa13.4□□□□□ -0.26
TNFSF13-205ENST00000396545 GNG7O60262 68 aa13.4□□□□□ -0.26
TNFSF13-205ENST00000396545 PPIFP30405 207 aaKnown RBP13.4□□□□□ -0.26
TNFSF13-205ENST00000396545 C18orf65Q6ZTR6 163 aa13.4□□□□□ -0.26
TNFSF13-205ENST00000396545 OCC1Q8TAD7 63 aa13.4□□□□□ -0.26
TNFSF13-205ENST00000396545 DPF1Q92782 380 aa13.4□□□□□ -0.26
TNFSF13-205ENST00000396545 SLC25A39Q9BZJ4 359 aaPredicted RBP13.4□□□□□ -0.26
TNFSF13-205ENST00000396545 TMEM14CQ9P0S9 112 aa13.4□□□□□ -0.26
TNFSF13-205ENST00000396545 TRBV7-1A0A0A6YYK4 115 aa13.39□□□□□ -0.27
TNFSF13-205ENST00000396545 PGPEP1LA6NFU8 196 aa13.39□□□□□ -0.27
TNFSF13-205ENST00000396545 C8orf86Q6ZUL3 223 aa13.39□□□□□ -0.27
TNFSF13-205ENST00000396545 S100A7AQ86SG5 101 aa13.39□□□□□ -0.27
TNFSF13-205ENST00000396545 ZFP82Q8N141 532 aa13.39□□□□□ -0.27
TNFSF13-205ENST00000396545 ZNF491Q8N8L2 437 aa13.39□□□□□ -0.27
TNFSF13-205ENST00000396545 USMG5Q96IX5 58 aa13.39□□□□□ -0.27
TNFSF13-205ENST00000396545 MCRIP2Q9BUT9 160 aaKnown RBP13.39□□□□□ -0.27
TNFSF13-205ENST00000396545 RYR3Q15413 4870 aa13.39□□□□□ -0.27
TNFSF13-205ENST00000396545 H3BRN7 92 aa13.38□□□□□ -0.27
TNFSF13-205ENST00000396545 GALR1P47211 349 aa13.38□□□□□ -0.27
TNFSF13-205ENST00000396545 C15orf32Q32M92 178 aa13.38□□□□□ -0.27
TNFSF13-205ENST00000396545 FAM209BQ5JX69 171 aa13.38□□□□□ -0.27
TNFSF13-205ENST00000396545 EEF1AKMT3Q96AZ1 226 aa13.38□□□□□ -0.27
TNFSF13-205ENST00000396545 SFRP2Q96HF1 295 aa13.38□□□□□ -0.27
TNFSF13-205ENST00000396545 FAM210BQ96KR6 192 aa13.38□□□□□ -0.27
TNFSF13-205ENST00000396545 OR5B12Q96R08 314 aa13.38□□□□□ -0.27
TNFSF13-205ENST00000396545 B9D2Q9BPU9 175 aa13.38□□□□□ -0.27
TNFSF13-205ENST00000396545 LINC00527Q9UJ94 153 aa13.38□□□□□ -0.27
TNFSF13-205ENST00000396545 HELTA6NFD8 242 aa13.37□□□□□ -0.27
TNFSF13-205ENST00000396545 K7EN84 100 aa13.37□□□□□ -0.27
TNFSF13-205ENST00000396545 TGOLN2O43493 480 aa13.37□□□□□ -0.27
TNFSF13-205ENST00000396545 RPS10P46783 165 aaKnown RBP13.37□□□□□ -0.27
TNFSF13-205ENST00000396545 ATP5G2Q06055 141 aa13.37□□□□□ -0.27
TNFSF13-205ENST00000396545 Q56UQ5 140 aa13.37□□□□□ -0.27
TNFSF13-205ENST00000396545 KLHL30-AS1Q8NEE0 82 aa13.37□□□□□ -0.27
TNFSF13-205ENST00000396545 ZNF502Q8TBZ5 544 aa13.37□□□□□ -0.27
TNFSF13-205ENST00000396545 RNF125Q96EQ8 232 aa13.37□□□□□ -0.27
TNFSF13-205ENST00000396545 IMMP2LQ96T52 175 aa13.37□□□□□ -0.27
TNFSF13-205ENST00000396545 SHANK2-AS3Q9BTD1 123 aa13.37□□□□□ -0.27
TNFSF13-205ENST00000396545 BIN3Q9NQY0 253 aa13.37□□□□□ -0.27
TNFSF13-205ENST00000396545 IGLV1-40P01703 118 aa13.37□□□□□ -0.27
TNFSF13-205ENST00000396545 NBEAP1P0C6P0 100 aa13.37□□□□□ -0.27
TNFSF13-205ENST00000396545 S100PP25815 95 aa13.37□□□□□ -0.27
TNFSF13-205ENST00000396545 S100A7P31151 101 aa13.37□□□□□ -0.27
TNFSF13-205ENST00000396545 SLC35B1P78383 322 aa13.37□□□□□ -0.27
TNFSF13-205ENST00000396545 CFHR3Q02985 330 aa13.37□□□□□ -0.27
TNFSF13-205ENST00000396545 CENPWQ5EE01 88 aa13.37□□□□□ -0.27
TNFSF13-205ENST00000396545 TEX38Q6PEX7 206 aa13.37□□□□□ -0.27
TNFSF13-205ENST00000396545 IGF2BP2-AS1Q96M15 143 aa13.37□□□□□ -0.27
TNFSF13-205ENST00000396545 S4R3C0 116 aa13.37□□□□□ -0.27
TNFSF13-205ENST00000396545 A0A0G2JLM5 398 aa13.36□□□□□ -0.27
TNFSF13-205ENST00000396545 GGCTO75223 188 aaKnown RBP13.36□□□□□ -0.27
TNFSF13-205ENST00000396545 TRGV3P03979 118 aa13.36□□□□□ -0.27
TNFSF13-205ENST00000396545 TAS2R60P59551 318 aa13.36□□□□□ -0.27
TNFSF13-205ENST00000396545 RNF24Q9Y225 148 aa13.36□□□□□ -0.27
TNFSF13-205ENST00000396545 STAB2Q8WWQ8 2551 aa13.36□□□□□ -0.27
TNFSF13-205ENST00000396545 PEX7O00628 323 aa13.35□□□□□ -0.27
TNFSF13-205ENST00000396545 IL4P05112 153 aa13.35□□□□□ -0.27
TNFSF13-205ENST00000396545 GNG4P50150 75 aa13.35□□□□□ -0.27
TNFSF13-205ENST00000396545 LEMD1Q68G75 181 aa13.35□□□□□ -0.27
TNFSF13-205ENST00000396545 ZNF600Q6ZNG1 722 aa13.35□□□□□ -0.27
TNFSF13-205ENST00000396545 TMEM190Q8WZ59 177 aa13.35□□□□□ -0.27
TNFSF13-205ENST00000396545 IGLV2-8P01709 118 aa13.34□□□□□ -0.27
TNFSF13-205ENST00000396545 IGHG4P01861 327 aa13.34□□□□□ -0.27
TNFSF13-205ENST00000396545 HIST1H1EP10412 219 aaKnown RBP13.34□□□□□ -0.27
TNFSF13-205ENST00000396545 OR10G8Q8NGN5 311 aa13.34□□□□□ -0.27
TNFSF13-205ENST00000396545 RAX2Q96IS3 184 aa13.34□□□□□ -0.27
TNFSF13-205ENST00000396545 CTSGP08311 255 aa13.33□□□□□ -0.28
TNFSF13-205ENST00000396545 TPPP2P59282 170 aa13.33□□□□□ -0.28
TNFSF13-205ENST00000396545 RANP62826 216 aaKnown RBP13.33□□□□□ -0.28
TNFSF13-205ENST00000396545 USF2Q15853 346 aaPredicted RBP13.33□□□□□ -0.28
TNFSF13-205ENST00000396545 KCNIP4Q6PIL6 250 aa13.33□□□□□ -0.28
TNFSF13-205ENST00000396545 BLNKQ8WV28 456 aa13.33□□□□□ -0.28
TNFSF13-205ENST00000396545 WWC2-AS2Q96NR7 200 aa13.33□□□□□ -0.28
TNFSF13-205ENST00000396545 MS4A10Q96PG2 267 aa13.33□□□□□ -0.28
TNFSF13-205ENST00000396545 DUX3Q96PT4 197 aa13.33□□□□□ -0.28
TNFSF13-205ENST00000396545 SRD5A3Q9H8P0 318 aa13.33□□□□□ -0.28
TNFSF13-205ENST00000396545 EPDR1Q9UM22 224 aa13.33□□□□□ -0.28
TNFSF13-205ENST00000396545 MRPS12O15235 138 aaKnown RBP13.32□□□□□ -0.28
TNFSF13-205ENST00000396545 GCGP01275 180 aa13.32□□□□□ -0.28
TNFSF13-205ENST00000396545 TYMSP04818 313 aa13.32□□□□□ -0.28
TNFSF13-205ENST00000396545 CNN1P51911 297 aaKnown RBP13.32□□□□□ -0.28
TNFSF13-205ENST00000396545 ZNF414Q96IQ9 312 aa13.32□□□□□ -0.28
TNFSF13-205ENST00000396545 ZNF586Q9NXT0 402 aa13.32□□□□□ -0.28
TNFSF13-205ENST00000396545 ZMAT5Q9UDW3 170 aaKnown RBP13.32□□□□□ -0.28
TNFSF13-205ENST00000396545 PGPA6NDG6 321 aa13.32□□□□□ -0.28
TNFSF13-205ENST00000396545 C5orf52A6NGY3 159 aa13.32□□□□□ -0.28
TNFSF13-205ENST00000396545 OR2T8A6NH00 312 aa13.32□□□□□ -0.28
TNFSF13-205ENST00000396545 CCL24O00175 119 aa13.32□□□□□ -0.28
TNFSF13-205ENST00000396545 PHOX2AO14813 284 aa13.32□□□□□ -0.28
TNFSF13-205ENST00000396545 IGHV3-23P01764 117 aa13.32□□□□□ -0.28
TNFSF13-205ENST00000396545 RPLP1P05386 114 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms