RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 C8orf49Q96NF6 230 aa12.35□□□□□ -0.43
HOXA3-202ENST00000396352 K7EQM0 130 aa12.35□□□□□ -0.43
HOXA3-202ENST00000396352 CFHR4Q92496 578 aa12.35□□□□□ -0.43
HOXA3-202ENST00000396352 ONECUT1Q9UBC0 465 aa12.35□□□□□ -0.43
HOXA3-202ENST00000396352 H0Y8G0 127 aa12.35□□□□□ -0.43
HOXA3-202ENST00000396352 KLF17Q5JT82 389 aaPredicted RBP12.35□□□□□ -0.43
HOXA3-202ENST00000396352 AP5S1Q9NUS5 200 aa12.35□□□□□ -0.43
HOXA3-202ENST00000396352 CBY1Q9Y3M2 126 aa12.35□□□□□ -0.43
HOXA3-202ENST00000396352 S4R3C0 116 aa12.35□□□□□ -0.43
HOXA3-202ENST00000396352 A0A1B0GW15 77 aa12.34□□□□□ -0.43
HOXA3-202ENST00000396352 NBR2O15453 112 aa12.34□□□□□ -0.43
HOXA3-202ENST00000396352 LY6G5BQ8NDX9 201 aa12.34□□□□□ -0.43
HOXA3-202ENST00000396352 IGHV2-70DA0A0C4DH43 119 aa12.34□□□□□ -0.43
HOXA3-202ENST00000396352 FCGR2BP31994 310 aaPredicted RBP12.34□□□□□ -0.43
HOXA3-202ENST00000396352 BVES-AS1Q5T3Y7 98 aa12.34□□□□□ -0.43
HOXA3-202ENST00000396352 PMCHL2Q9BQD1 86 aa12.34□□□□□ -0.43
HOXA3-202ENST00000396352 ZNF747Q9BV97 191 aa12.34□□□□□ -0.43
HOXA3-202ENST00000396352 LOC105371242A0A075B767 164 aa12.33□□□□□ -0.44
HOXA3-202ENST00000396352 HSBP1L1C9JCN9 74 aa12.33□□□□□ -0.44
HOXA3-202ENST00000396352 NDUFA3O95167 84 aa12.33□□□□□ -0.44
HOXA3-202ENST00000396352 Q6AWC8 147 aa12.33□□□□□ -0.44
HOXA3-202ENST00000396352 ZNF493Q6ZR52 646 aa12.33□□□□□ -0.44
HOXA3-202ENST00000396352 NUDT3O95989 172 aa12.33□□□□□ -0.44
HOXA3-202ENST00000396352 NPBQ8NG41 125 aa12.33□□□□□ -0.44
HOXA3-202ENST00000396352 GVINP1Q7Z2Y8 2422 aa12.33□□□□□ -0.44
HOXA3-202ENST00000396352 TPPP3Q9BW30 176 aa12.33□□□□□ -0.44
HOXA3-202ENST00000396352 MS4A6AQ9H2W1 248 aa12.33□□□□□ -0.44
HOXA3-202ENST00000396352 HILPDAQ9Y5L2 63 aa12.33□□□□□ -0.44
HOXA3-202ENST00000396352 F8W735 103 aaPredicted RBP12.32□□□□□ -0.44
HOXA3-202ENST00000396352 TAX1BP3O14907 124 aa12.32□□□□□ -0.44
HOXA3-202ENST00000396352 NCR2O95944 276 aa12.32□□□□□ -0.44
HOXA3-202ENST00000396352 FAM106CPP0CH98 169 aa12.32□□□□□ -0.44
HOXA3-202ENST00000396352 ZNF672Q499Z4 452 aaPredicted RBP12.32□□□□□ -0.44
HOXA3-202ENST00000396352 FAM106AQ4KMX7 169 aa12.32□□□□□ -0.44
HOXA3-202ENST00000396352 RNASE8Q8TDE3 154 aaKnown RBP12.32□□□□□ -0.44
HOXA3-202ENST00000396352 TIMM8BQ9Y5J9 83 aaPredicted RBP12.32□□□□□ -0.44
HOXA3-202ENST00000396352 A0A096LNJ9 63 aa12.32□□□□□ -0.44
HOXA3-202ENST00000396352 PDE6HQ13956 83 aa12.32□□□□□ -0.44
HOXA3-202ENST00000396352 OR11H6Q8NGC7 330 aa12.32□□□□□ -0.44
HOXA3-202ENST00000396352 LINC01560Q8TB33 94 aa12.32□□□□□ -0.44
HOXA3-202ENST00000396352 FANCD2OSQ96PS1 177 aa12.32□□□□□ -0.44
HOXA3-202ENST00000396352 TCF15Q12870 199 aa12.31□□□□□ -0.44
HOXA3-202ENST00000396352 RAB1BQ9H0U4 201 aa12.31□□□□□ -0.44
HOXA3-202ENST00000396352 IGLV11-55A0A075B6I3 123 aa12.31□□□□□ -0.44
HOXA3-202ENST00000396352 ARHGAP32A7KAX9 2087 aa12.31□□□□□ -0.44
HOXA3-202ENST00000396352 DPM3Q9P2X0 92 aa12.31□□□□□ -0.44
HOXA3-202ENST00000396352 ZFHX2Q9C0A1 2572 aaPredicted RBP12.31□□□□□ -0.44
HOXA3-202ENST00000396352 MUC21A0A0G2JKD1 596 aa12.31□□□□□ -0.44
HOXA3-202ENST00000396352 MUC21A0A140T8X8 626 aa12.31□□□□□ -0.44
HOXA3-202ENST00000396352 MUC21Q5SSG8 566 aa12.31□□□□□ -0.44
HOXA3-202ENST00000396352 RIF1Q5UIP0 2472 aaKnown RBP12.31□□□□□ -0.44
HOXA3-202ENST00000396352 K7EP13 123 aa12.3□□□□□ -0.44
HOXA3-202ENST00000396352 GNG7O60262 68 aa12.3□□□□□ -0.44
HOXA3-202ENST00000396352 IFI27P40305 119 aaPredicted RBP12.3□□□□□ -0.44
HOXA3-202ENST00000396352 LOXL1Q08397 574 aaPredicted RBP12.3□□□□□ -0.44
HOXA3-202ENST00000396352 LYZL1Q6UWQ5 148 aa12.3□□□□□ -0.44
HOXA3-202ENST00000396352 FA2HQ7L5A8 372 aa12.3□□□□□ -0.44
HOXA3-202ENST00000396352 DEFB125Q8N687 156 aa12.3□□□□□ -0.44
HOXA3-202ENST00000396352 OR10AG1Q8NH19 301 aa12.3□□□□□ -0.44
HOXA3-202ENST00000396352 PRSS3P2Q8NHM4 247 aa12.3□□□□□ -0.44
HOXA3-202ENST00000396352 U3KQK5 164 aa12.3□□□□□ -0.44
HOXA3-202ENST00000396352 KLRD1Q13241 179 aa12.3□□□□□ -0.44
HOXA3-202ENST00000396352 ZNF48Q96MX3 618 aaPredicted RBP12.3□□□□□ -0.44
HOXA3-202ENST00000396352 VKORC1Q9BQB6 163 aa12.3□□□□□ -0.44
HOXA3-202ENST00000396352 TMEM213A2RRL7 107 aa12.29□□□□□ -0.44
HOXA3-202ENST00000396352 D6R8Y8 96 aa12.29□□□□□ -0.44
HOXA3-202ENST00000396352 CT45A10P0DMU9 189 aa12.29□□□□□ -0.44
HOXA3-202ENST00000396352 ARF6P62330 175 aa12.29□□□□□ -0.44
HOXA3-202ENST00000396352 FOXE3Q13461 319 aa12.29□□□□□ -0.44
HOXA3-202ENST00000396352 ERASQ7Z444 233 aa12.29□□□□□ -0.44
HOXA3-202ENST00000396352 TRAV30A0A087WSZ9 112 aa12.29□□□□□ -0.44
HOXA3-202ENST00000396352 NPIPB5A8MRT5 1133 aa12.29□□□□□ -0.44
HOXA3-202ENST00000396352 SH2D1AO60880 128 aa12.29□□□□□ -0.44
HOXA3-202ENST00000396352 LY6HO94772 140 aa12.29□□□□□ -0.44
HOXA3-202ENST00000396352 GRNP28799 593 aaKnown RBP12.29□□□□□ -0.44
HOXA3-202ENST00000396352 CSN1S1P47710 185 aa12.29□□□□□ -0.44
HOXA3-202ENST00000396352 C5orf64Q2M2E5 130 aa12.29□□□□□ -0.44
HOXA3-202ENST00000396352 C12orf54Q6X4T0 127 aa12.29□□□□□ -0.44
HOXA3-202ENST00000396352 PIP4P2Q8N4L2 257 aa12.29□□□□□ -0.44
HOXA3-202ENST00000396352 AAMDCQ9H7C9 122 aa12.29□□□□□ -0.44
HOXA3-202ENST00000396352 RELNP78509 3460 aa12.29□□□□□ -0.44
HOXA3-202ENST00000396352 TPRP12270 2363 aaKnown RBP12.29□□□□□ -0.44
HOXA3-202ENST00000396352 C2orf91Q6ZV80 131 aa12.29□□□□□ -0.44
HOXA3-202ENST00000396352 SIGLEC8Q9NYZ4 499 aa12.29□□□□□ -0.44
HOXA3-202ENST00000396352 A0A087X0K7 114 aa12.28□□□□□ -0.44
HOXA3-202ENST00000396352 ODF3BA8MYP8 253 aa12.28□□□□□ -0.44
HOXA3-202ENST00000396352 COX8AP10176 69 aa12.28□□□□□ -0.44
HOXA3-202ENST00000396352 RBX1P62877 108 aa12.28□□□□□ -0.44
HOXA3-202ENST00000396352 NDPQ00604 133 aa12.28□□□□□ -0.44
HOXA3-202ENST00000396352 HIST1H1AQ02539 215 aaPredicted RBP12.28□□□□□ -0.44
HOXA3-202ENST00000396352 COX8CQ7Z4L0 72 aa12.28□□□□□ -0.44
HOXA3-202ENST00000396352 TMSB15BA0A087X1C1 80 aa12.28□□□□□ -0.44
HOXA3-202ENST00000396352 MFAP4P55083 255 aa12.28□□□□□ -0.44
HOXA3-202ENST00000396352 RHOGP84095 191 aa12.28□□□□□ -0.44
HOXA3-202ENST00000396352 FAM104BQ5XKR9 115 aa12.28□□□□□ -0.44
HOXA3-202ENST00000396352 AMN1Q8IY45 258 aa12.28□□□□□ -0.44
HOXA3-202ENST00000396352 HRNRQ86YZ3 2850 aaPredicted RBP12.28□□□□□ -0.44
HOXA3-202ENST00000396352 IGKV2-40A0A087WW87 121 aaPredicted RBP12.28□□□□□ -0.44
HOXA3-202ENST00000396352 TMEM189A5PLL7 270 aa12.28□□□□□ -0.44
HOXA3-202ENST00000396352 IGKV2D-40P01614 121 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms