RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 SMAD5-AS1Q9Y6J3 95 aa6.64□□□□□ -1.35
TDP1-203ENST00000393454 URGCP-MRPS24S4R325 110 aa6.64□□□□□ -1.35
TDP1-203ENST00000393454 H7BYZ3 331 aa6.63□□□□□ -1.35
TDP1-203ENST00000393454 CLDN34H7C241 214 aa6.63□□□□□ -1.35
TDP1-203ENST00000393454 TCRAP04437 139 aa6.63□□□□□ -1.35
TDP1-203ENST00000393454 PRB4P10163 310 aaPredicted RBP6.63□□□□□ -1.35
TDP1-203ENST00000393454 MGST1P10620 155 aaKnown RBP6.63□□□□□ -1.35
TDP1-203ENST00000393454 CD99P14209 185 aa6.63□□□□□ -1.35
TDP1-203ENST00000393454 TAS2R60P59551 318 aa6.63□□□□□ -1.35
TDP1-203ENST00000393454 PDE6HQ13956 83 aa6.63□□□□□ -1.35
TDP1-203ENST00000393454 RPEL1Q2QD12 228 aa6.63□□□□□ -1.35
TDP1-203ENST00000393454 KHDC1LQ5JSQ8 128 aa6.63□□□□□ -1.35
TDP1-203ENST00000393454 C1orf194Q5T5A4 169 aa6.63□□□□□ -1.35
TDP1-203ENST00000393454 SIGLEC15Q6ZMC9 328 aa6.63□□□□□ -1.35
TDP1-203ENST00000393454 FAM24BQ8N5W8 94 aa6.63□□□□□ -1.35
TDP1-203ENST00000393454 C15orf54Q8N8G6 183 aa6.63□□□□□ -1.35
TDP1-203ENST00000393454 NHLRC2Q8NBF2 726 aa6.63□□□□□ -1.35
TDP1-203ENST00000393454 TUBA4BQ9H853 241 aa6.63□□□□□ -1.35
TDP1-203ENST00000393454 ANK3Q12955 4377 aaKnown RBP6.63□□□□□ -1.35
TDP1-203ENST00000393454 COLCA2A8K830 154 aa6.62□□□□□ -1.35
TDP1-203ENST00000393454 ISLRO14498 428 aa6.62□□□□□ -1.35
TDP1-203ENST00000393454 LGALS1P09382 135 aaKnown RBP6.62□□□□□ -1.35
TDP1-203ENST00000393454 OR5I1Q13606 314 aa6.62□□□□□ -1.35
TDP1-203ENST00000393454 TM4SF20Q53R12 229 aa6.62□□□□□ -1.35
TDP1-203ENST00000393454 GOLT1AQ6ZVE7 132 aa6.62□□□□□ -1.35
TDP1-203ENST00000393454 BAGE2Q86Y30 109 aa6.62□□□□□ -1.35
TDP1-203ENST00000393454 TMEM190Q8WZ59 177 aa6.62□□□□□ -1.35
TDP1-203ENST00000393454 ANAPC16Q96DE5 110 aa6.62□□□□□ -1.35
TDP1-203ENST00000393454 GRAMD2BQ96HH9 432 aa6.62□□□□□ -1.35
TDP1-203ENST00000393454 UBE2E2Q96LR5 201 aa6.62□□□□□ -1.35
TDP1-203ENST00000393454 IGF2BP2-AS1Q96M15 143 aa6.62□□□□□ -1.35
TDP1-203ENST00000393454 LY96Q9Y6Y9 160 aa6.62□□□□□ -1.35
TDP1-203ENST00000393454 U3KQE9 123 aa6.62□□□□□ -1.35
TDP1-203ENST00000393454 A0A1W2PS18 150 aa6.62□□□□□ -1.35
TDP1-203ENST00000393454 CXorf65A6NEN9 183 aa6.62□□□□□ -1.35
TDP1-203ENST00000393454 K7EN84 100 aa6.62□□□□□ -1.35
TDP1-203ENST00000393454 M0R3E3 92 aa6.62□□□□□ -1.35
TDP1-203ENST00000393454 RNASE1P07998 156 aaKnown RBP6.62□□□□□ -1.35
TDP1-203ENST00000393454 CSN1S1P47710 185 aa6.62□□□□□ -1.35
TDP1-203ENST00000393454 TMEM183BQ1AE95 376 aa6.62□□□□□ -1.35
TDP1-203ENST00000393454 IGFL4Q6B9Z1 124 aa6.62□□□□□ -1.35
TDP1-203ENST00000393454 C16orf54Q6UWD8 224 aa6.62□□□□□ -1.35
TDP1-203ENST00000393454 SFRP2Q96HF1 295 aa6.62□□□□□ -1.35
TDP1-203ENST00000393454 FMC1Q96HJ9 113 aa6.62□□□□□ -1.35
TDP1-203ENST00000393454 TMEM242Q9NWH2 141 aa6.62□□□□□ -1.35
TDP1-203ENST00000393454 K7EQM0 130 aa6.61□□□□□ -1.35
TDP1-203ENST00000393454 S100A9P06702 114 aaKnown RBP6.61□□□□□ -1.35
TDP1-203ENST00000393454 HILS1P60008 231 aa6.61□□□□□ -1.35
TDP1-203ENST00000393454 ERVFC1-1P60608 527 aa6.61□□□□□ -1.35
TDP1-203ENST00000393454 RPL11P62913 178 aaKnown RBP6.61□□□□□ -1.35
TDP1-203ENST00000393454 GPHB5Q86YW7 130 aa6.61□□□□□ -1.35
TDP1-203ENST00000393454 RNF152Q8N8N0 203 aa6.61□□□□□ -1.35
TDP1-203ENST00000393454 OR10G8Q8NGN5 311 aa6.61□□□□□ -1.35
TDP1-203ENST00000393454 MYOZ3Q8TDC0 251 aa6.61□□□□□ -1.35
TDP1-203ENST00000393454 NF1P21359 2839 aa6.61□□□□□ -1.35
TDP1-203ENST00000393454 IGHV4OR15-8A0A075B7B6 117 aa6.61□□□□□ -1.35
TDP1-203ENST00000393454 A0A087WW49 117 aa6.61□□□□□ -1.35
TDP1-203ENST00000393454 TRAV8-1A0A0A6YYK1 113 aa6.61□□□□□ -1.35
TDP1-203ENST00000393454 IGHV7-4-1A0A0J9YVY3 117 aa6.61□□□□□ -1.35
TDP1-203ENST00000393454 DIRC3C9JPN6 131 aa6.61□□□□□ -1.35
TDP1-203ENST00000393454 INAFM1C9JVW0 142 aa6.61□□□□□ -1.35
TDP1-203ENST00000393454 PPP1R2P9O14990 202 aa6.61□□□□□ -1.35
TDP1-203ENST00000393454 S100PP25815 95 aa6.61□□□□□ -1.35
TDP1-203ENST00000393454 ELOBQ15370 118 aa6.61□□□□□ -1.35
TDP1-203ENST00000393454 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.61□□□□□ -1.35
TDP1-203ENST00000393454 C18orf65Q6ZTR6 163 aa6.61□□□□□ -1.35
TDP1-203ENST00000393454 PRNTQ86SH4 94 aa6.61□□□□□ -1.35
TDP1-203ENST00000393454 JMJD8Q96S16 334 aa6.61□□□□□ -1.35
TDP1-203ENST00000393454 RHPN1-AS1Q9BWJ2 59 aa6.61□□□□□ -1.35
TDP1-203ENST00000393454 DAZ1Q9NQZ3 744 aaKnown RBP6.61□□□□□ -1.35
TDP1-203ENST00000393454 UFC1Q9Y3C8 167 aa6.61□□□□□ -1.35
TDP1-203ENST00000393454 KLF12Q9Y4X4 402 aa6.61□□□□□ -1.35
TDP1-203ENST00000393454 A0A087X0K7 114 aa6.6□□□□□ -1.35
TDP1-203ENST00000393454 TGIF2-C20orf24A0A0A6YYL0 155 aa6.6□□□□□ -1.35
TDP1-203ENST00000393454 ZNF253O75346 499 aa6.6□□□□□ -1.35
TDP1-203ENST00000393454 IGLV2-8P01709 118 aa6.6□□□□□ -1.35
TDP1-203ENST00000393454 HLA-DMBP28068 263 aa6.6□□□□□ -1.35
TDP1-203ENST00000393454 PRR27Q6MZM9 219 aa6.6□□□□□ -1.35
TDP1-203ENST00000393454 C11orf44Q8N8P7 122 aa6.6□□□□□ -1.35
TDP1-203ENST00000393454 RNASE7Q9H1E1 156 aaKnown RBP6.6□□□□□ -1.35
TDP1-203ENST00000393454 ZNF331Q9NQX6 463 aaPredicted RBP6.6□□□□□ -1.35
TDP1-203ENST00000393454 SELENOKQ9Y6D0 94 aa6.6□□□□□ -1.35
TDP1-203ENST00000393454 IGKV3-7A0A075B6H7 116 aa6.59□□□□□ -1.35
TDP1-203ENST00000393454 ZNF705FA8MVS1 300 aaPredicted RBP6.59□□□□□ -1.35
TDP1-203ENST00000393454 K7EMT4 169 aa6.59□□□□□ -1.35
TDP1-203ENST00000393454 GCGP01275 180 aa6.59□□□□□ -1.35
TDP1-203ENST00000393454 FOSL1P15407 271 aa6.59□□□□□ -1.35
TDP1-203ENST00000393454 SYNJ2BPP57105 145 aa6.59□□□□□ -1.35
TDP1-203ENST00000393454 DEFB136Q30KP8 78 aa6.59□□□□□ -1.35
TDP1-203ENST00000393454 HIST2H2BDQ6DRA6 164 aa6.59□□□□□ -1.35
TDP1-203ENST00000393454 RNF182Q8N6D2 247 aa6.59□□□□□ -1.35
TDP1-203ENST00000393454 GLMPQ8WWB7 406 aa6.59□□□□□ -1.35
TDP1-203ENST00000393454 DPF1Q92782 380 aa6.59□□□□□ -1.35
TDP1-203ENST00000393454 C16orf92Q96LL3 132 aa6.59□□□□□ -1.35
TDP1-203ENST00000393454 SLC50A1Q9BRV3 221 aa6.59□□□□□ -1.35
TDP1-203ENST00000393454 SMPXQ9UHP9 88 aa6.59□□□□□ -1.35
TDP1-203ENST00000393454 IGKV2-40A0A087WW87 121 aaPredicted RBP6.59□□□□□ -1.35
TDP1-203ENST00000393454 CHEK1O14757 476 aa6.59□□□□□ -1.35
TDP1-203ENST00000393454 IGKV2D-40P01614 121 aaPredicted RBP6.59□□□□□ -1.35
TDP1-203ENST00000393454 CXCL1P09341 107 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms