RNA–Protein interactions for RNA: ENST00000393211.3

COL17A1-203, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL17A1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-203ENST00000393211 OR9G4Q8NGQ1 327 aa7.87□□□□□ -1.15
COL17A1-203ENST00000393211 WDFY4Q6ZS81 3184 aa7.87□□□□□ -1.15
COL17A1-203ENST00000393211 ICE1Q9Y2F5 2266 aa7.87□□□□□ -1.15
COL17A1-203ENST00000393211 FCGR2BP31994 310 aaPredicted RBP7.86□□□□□ -1.15
COL17A1-203ENST00000393211 BMI1P35226 326 aa7.86□□□□□ -1.15
COL17A1-203ENST00000393211 LINC01559Q495D7 138 aa7.86□□□□□ -1.15
COL17A1-203ENST00000393211 ANKRD39Q53RE8 183 aa7.86□□□□□ -1.15
COL17A1-203ENST00000393211 TMEM97Q5BJF2 176 aa7.86□□□□□ -1.15
COL17A1-203ENST00000393211 GFRALQ6UXV0 394 aa7.86□□□□□ -1.15
COL17A1-203ENST00000393211 C2orf91Q6ZV80 131 aa7.86□□□□□ -1.15
COL17A1-203ENST00000393211 OR11H6Q8NGC7 330 aa7.86□□□□□ -1.15
COL17A1-203ENST00000393211 PIFOQ8TCI5 191 aa7.86□□□□□ -1.15
COL17A1-203ENST00000393211 C17orf77Q96MU5 243 aa7.86□□□□□ -1.15
COL17A1-203ENST00000393211 PRELID3AQ96N28 172 aa7.86□□□□□ -1.15
COL17A1-203ENST00000393211 DPM3Q9P2X0 92 aa7.86□□□□□ -1.15
COL17A1-203ENST00000393211 SVILO95425 2214 aa7.86□□□□□ -1.15
COL17A1-203ENST00000393211 CUL9Q8IWT3 2517 aa7.86□□□□□ -1.15
COL17A1-203ENST00000393211 A6NDN8 102 aa7.85□□□□□ -1.15
COL17A1-203ENST00000393211 OR2T8A6NH00 312 aa7.85□□□□□ -1.15
COL17A1-203ENST00000393211 GNG7O60262 68 aa7.85□□□□□ -1.15
COL17A1-203ENST00000393211 RPL7P18124 248 aaKnown RBP7.85□□□□□ -1.15
COL17A1-203ENST00000393211 PRR31Q5SQ13 230 aa7.85□□□□□ -1.15
COL17A1-203ENST00000393211 LYZL1Q6UWQ5 148 aa7.85□□□□□ -1.15
COL17A1-203ENST00000393211 SIGLEC8Q9NYZ4 499 aa7.85□□□□□ -1.15
COL17A1-203ENST00000393211 MALRD1Q5VYJ5 2156 aa7.85□□□□□ -1.15
COL17A1-203ENST00000393211 IGLV11-55A0A075B6I3 123 aa7.85□□□□□ -1.15
COL17A1-203ENST00000393211 A0A087X0K7 114 aa7.85□□□□□ -1.15
COL17A1-203ENST00000393211 A0A096LNJ9 63 aa7.85□□□□□ -1.15
COL17A1-203ENST00000393211 LINC01546A6NGU7 62 aa7.85□□□□□ -1.15
COL17A1-203ENST00000393211 D6R8Y8 96 aa7.85□□□□□ -1.15
COL17A1-203ENST00000393211 TIMM23O14925 209 aa7.85□□□□□ -1.15
COL17A1-203ENST00000393211 SH2D1AO60880 128 aa7.85□□□□□ -1.15
COL17A1-203ENST00000393211 HBDP02042 147 aa7.85□□□□□ -1.15
COL17A1-203ENST00000393211 FGF6P10767 208 aa7.85□□□□□ -1.15
COL17A1-203ENST00000393211 COX7A1P24310 79 aa7.85□□□□□ -1.15
COL17A1-203ENST00000393211 IFI27P40305 119 aaPredicted RBP7.85□□□□□ -1.15
COL17A1-203ENST00000393211 AMMECR1LQ6DCA0 310 aa7.85□□□□□ -1.15
COL17A1-203ENST00000393211 BOD1L2Q8IYS8 172 aa7.85□□□□□ -1.15
COL17A1-203ENST00000393211 OR4X2Q8NGF9 303 aa7.85□□□□□ -1.15
COL17A1-203ENST00000393211 CFHR4Q92496 578 aa7.85□□□□□ -1.15
COL17A1-203ENST00000393211 CST9LQ9H4G1 147 aa7.85□□□□□ -1.15
COL17A1-203ENST00000393211 THYN1Q9P016 225 aa7.85□□□□□ -1.15
COL17A1-203ENST00000393211 DMDP11532 3685 aa7.84□□□□□ -1.15
COL17A1-203ENST00000393211 CBY3A6NI87 242 aa7.84□□□□□ -1.15
COL17A1-203ENST00000393211 H0Y8G0 127 aa7.84□□□□□ -1.15
COL17A1-203ENST00000393211 H3BRM9 83 aa7.84□□□□□ -1.15
COL17A1-203ENST00000393211 M0R1W7 72 aa7.84□□□□□ -1.15
COL17A1-203ENST00000393211 KLK10O43240 276 aa7.84□□□□□ -1.15
COL17A1-203ENST00000393211 PAX8Q06710 450 aa7.84□□□□□ -1.15
COL17A1-203ENST00000393211 HSD52Q0P140 79 aa7.84□□□□□ -1.15
COL17A1-203ENST00000393211 MRPL51Q4U2R6 128 aaKnown RBP7.84□□□□□ -1.15
COL17A1-203ENST00000393211 TTC9CQ8N5M4 171 aa7.84□□□□□ -1.15
COL17A1-203ENST00000393211 C8orf49Q96NF6 230 aa7.84□□□□□ -1.15
COL17A1-203ENST00000393211 PRR25Q96S07 402 aa7.84□□□□□ -1.15
COL17A1-203ENST00000393211 PLXNB1O43157 2135 aa7.83□□□□□ -1.16
COL17A1-203ENST00000393211 ARFGEF3Q5TH69 2177 aa7.83□□□□□ -1.16
COL17A1-203ENST00000393211 C7orf71A4D174 169 aa7.83□□□□□ -1.16
COL17A1-203ENST00000393211 OOSP1A8MZH6 123 aa7.83□□□□□ -1.16
COL17A1-203ENST00000393211 SMAD7O15105 426 aaKnown RBP7.83□□□□□ -1.16
COL17A1-203ENST00000393211 NCR2O95944 276 aa7.83□□□□□ -1.16
COL17A1-203ENST00000393211 IGLC6P0CF74 106 aa7.83□□□□□ -1.16
COL17A1-203ENST00000393211 NHLH1Q02575 133 aa7.83□□□□□ -1.16
COL17A1-203ENST00000393211 C5orf64Q2M2E5 130 aa7.83□□□□□ -1.16
COL17A1-203ENST00000393211 OCIAD2Q56VL3 154 aa7.83□□□□□ -1.16
COL17A1-203ENST00000393211 ZNF562Q6V9R5 426 aa7.83□□□□□ -1.16
COL17A1-203ENST00000393211 GTF2H5Q6ZYL4 71 aa7.83□□□□□ -1.16
COL17A1-203ENST00000393211 Q71RC1 249 aaPredicted RBP7.83□□□□□ -1.16
COL17A1-203ENST00000393211 FANCD2OSQ96PS1 177 aa7.83□□□□□ -1.16
COL17A1-203ENST00000393211 CNFNQ9BYD5 112 aa7.83□□□□□ -1.16
COL17A1-203ENST00000393211 TP73-AS1Q9UF72 201 aa7.83□□□□□ -1.16
COL17A1-203ENST00000393211 A1L4Q6 167 aa7.82□□□□□ -1.16
COL17A1-203ENST00000393211 C9orf118A6NHY6 69 aa7.82□□□□□ -1.16
COL17A1-203ENST00000393211 K7ERU9 68 aa7.82□□□□□ -1.16
COL17A1-203ENST00000393211 M0R3E3 92 aa7.82□□□□□ -1.16
COL17A1-203ENST00000393211 RAB9AP51151 201 aa7.82□□□□□ -1.16
COL17A1-203ENST00000393211 COTL1Q14019 142 aa7.82□□□□□ -1.16
COL17A1-203ENST00000393211 AMN1Q8IY45 258 aa7.82□□□□□ -1.16
COL17A1-203ENST00000393211 Q8NA96 180 aa7.82□□□□□ -1.16
COL17A1-203ENST00000393211 FER1L6-AS1Q8NA97 138 aa7.82□□□□□ -1.16
COL17A1-203ENST00000393211 OR8A1Q8NGG7 326 aa7.82□□□□□ -1.16
COL17A1-203ENST00000393211 IFI27L1Q96BM0 104 aa7.82□□□□□ -1.16
COL17A1-203ENST00000393211 ABHD17AQ96GS6 310 aa7.82□□□□□ -1.16
COL17A1-203ENST00000393211 VKORC1Q9BQB6 163 aa7.82□□□□□ -1.16
COL17A1-203ENST00000393211 MCRIP2Q9BUT9 160 aaKnown RBP7.82□□□□□ -1.16
COL17A1-203ENST00000393211 TPPP3Q9BW30 176 aa7.82□□□□□ -1.16
COL17A1-203ENST00000393211 C21orf62Q9NYP8 219 aa7.82□□□□□ -1.16
COL17A1-203ENST00000393211 ONECUT1Q9UBC0 465 aa7.82□□□□□ -1.16
COL17A1-203ENST00000393211 TRAV8-6A0A0B4J262 113 aa7.81□□□□□ -1.16
COL17A1-203ENST00000393211 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.81□□□□□ -1.16
COL17A1-203ENST00000393211 GAGE12BA1L429 117 aa7.81□□□□□ -1.16
COL17A1-203ENST00000393211 TMEM213A2RRL7 107 aa7.81□□□□□ -1.16
COL17A1-203ENST00000393211 ODF3BA8MYP8 253 aa7.81□□□□□ -1.16
COL17A1-203ENST00000393211 CKS2P33552 79 aa7.81□□□□□ -1.16
COL17A1-203ENST00000393211 CCDC144NLQ6NUI1 221 aa7.81□□□□□ -1.16
COL17A1-203ENST00000393211 C1orf122Q6ZSJ8 110 aa7.81□□□□□ -1.16
COL17A1-203ENST00000393211 SMIM15Q7Z3B0 74 aa7.81□□□□□ -1.16
COL17A1-203ENST00000393211 ARPC1AQ92747 370 aa7.81□□□□□ -1.16
COL17A1-203ENST00000393211 AP1S3Q96PC3 154 aa7.81□□□□□ -1.16
COL17A1-203ENST00000393211 RABAC1Q9UI14 185 aa7.81□□□□□ -1.16
COL17A1-203ENST00000393211 TIMM8BQ9Y5J9 83 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms