RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 CUBNO60494 3623 aa9.63□□□□□ -0.87
CAPRIN1-202ENST00000389645 DOPEY1Q5JWR5 2465 aa9.62□□□□□ -0.87
CAPRIN1-202ENST00000389645 NDUFS8O00217 210 aa9.62□□□□□ -0.87
CAPRIN1-202ENST00000389645 OR4A5Q8NH83 315 aa9.62□□□□□ -0.87
CAPRIN1-202ENST00000389645 LY96Q9Y6Y9 160 aa9.62□□□□□ -0.87
CAPRIN1-202ENST00000389645 GAGE12BA1L429 117 aa9.62□□□□□ -0.87
CAPRIN1-202ENST00000389645 GPR82Q96P67 336 aa9.62□□□□□ -0.87
CAPRIN1-202ENST00000389645 GTSF1LQ9H1H1 148 aa9.62□□□□□ -0.87
CAPRIN1-202ENST00000389645 UBTD1Q9HAC8 227 aa9.62□□□□□ -0.87
CAPRIN1-202ENST00000389645 GPX1P07203 203 aa9.62□□□□□ -0.87
CAPRIN1-202ENST00000389645 IGLC2P0DOY2 106 aa9.62□□□□□ -0.87
CAPRIN1-202ENST00000389645 IGLC3P0DOY3 106 aa9.62□□□□□ -0.87
CAPRIN1-202ENST00000389645 TEX45Q8NA69 505 aa9.62□□□□□ -0.87
CAPRIN1-202ENST00000389645 RAB1BQ9H0U4 201 aa9.62□□□□□ -0.87
CAPRIN1-202ENST00000389645 TRAV9-1A0A075B6T8 112 aa9.61□□□□□ -0.87
CAPRIN1-202ENST00000389645 TRBV9A0A0B4J1U6 114 aa9.61□□□□□ -0.87
CAPRIN1-202ENST00000389645 A0A1W2PS18 150 aa9.61□□□□□ -0.87
CAPRIN1-202ENST00000389645 SH2D7A6NKC9 451 aaPredicted RBP9.61□□□□□ -0.87
CAPRIN1-202ENST00000389645 K7ERU9 68 aa9.61□□□□□ -0.87
CAPRIN1-202ENST00000389645 LIPFP07098 398 aa9.61□□□□□ -0.87
CAPRIN1-202ENST00000389645 NIT1Q86X76 327 aa9.61□□□□□ -0.87
CAPRIN1-202ENST00000389645 TSPOP30536 169 aa9.61□□□□□ -0.87
CAPRIN1-202ENST00000389645 LINC00310P59036 64 aa9.61□□□□□ -0.87
CAPRIN1-202ENST00000389645 MPV17L2Q567V2 206 aa9.61□□□□□ -0.87
CAPRIN1-202ENST00000389645 OR4F17Q8NGA8 305 aa9.61□□□□□ -0.87
CAPRIN1-202ENST00000389645 KCNS1Q96KK3 526 aa9.61□□□□□ -0.87
CAPRIN1-202ENST00000389645 IGF2BP2-AS1Q96M15 143 aa9.61□□□□□ -0.87
CAPRIN1-202ENST00000389645 WNK1Q9H4A3 2382 aa9.61□□□□□ -0.87
CAPRIN1-202ENST00000389645 SERTM2A0A1B0GWG4 89 aa9.61□□□□□ -0.87
CAPRIN1-202ENST00000389645 TMEM8BA6NDV4 472 aa9.61□□□□□ -0.87
CAPRIN1-202ENST00000389645 M0R3E3 92 aa9.61□□□□□ -0.87
CAPRIN1-202ENST00000389645 ZNF324O75467 553 aaPredicted RBP9.61□□□□□ -0.87
CAPRIN1-202ENST00000389645 ZNF841Q6ZN19 808 aa9.61□□□□□ -0.87
CAPRIN1-202ENST00000389645 C5orf17Q8NAS9 161 aa9.61□□□□□ -0.87
CAPRIN1-202ENST00000389645 GRAMD2BQ96HH9 432 aa9.61□□□□□ -0.87
CAPRIN1-202ENST00000389645 C17orf77Q96MU5 243 aa9.61□□□□□ -0.87
CAPRIN1-202ENST00000389645 USP9YO00507 2555 aaPredicted RBP9.61□□□□□ -0.87
CAPRIN1-202ENST00000389645 IGHV3OR16-13A0A075B7E8 117 aa9.6□□□□□ -0.87
CAPRIN1-202ENST00000389645 IGHV3-74A0A0B4J1X5 117 aa9.6□□□□□ -0.87
CAPRIN1-202ENST00000389645 BBC3Q96PG8 261 aaPredicted RBP9.6□□□□□ -0.87
CAPRIN1-202ENST00000389645 F11RQ9Y624 299 aaKnown RBP9.6□□□□□ -0.87
CAPRIN1-202ENST00000389645 POLQO75417 2590 aa9.6□□□□□ -0.87
CAPRIN1-202ENST00000389645 FBLL1A6NHQ2 334 aaKnown RBP9.6□□□□□ -0.87
CAPRIN1-202ENST00000389645 A8MWL6 223 aa9.6□□□□□ -0.87
CAPRIN1-202ENST00000389645 ZNF138P52744 262 aa9.6□□□□□ -0.87
CAPRIN1-202ENST00000389645 CFAP161Q6P656 301 aa9.6□□□□□ -0.87
CAPRIN1-202ENST00000389645 LINC00311Q8N616 119 aa9.6□□□□□ -0.87
CAPRIN1-202ENST00000389645 CHRDL1Q9BU40 450 aa9.6□□□□□ -0.87
CAPRIN1-202ENST00000389645 SLC25A39Q9BZJ4 359 aaPredicted RBP9.59□□□□□ -0.87
CAPRIN1-202ENST00000389645 PTPN13Q12923 2485 aa9.59□□□□□ -0.87
CAPRIN1-202ENST00000389645 TOMM40O96008 361 aa9.59□□□□□ -0.87
CAPRIN1-202ENST00000389645 TCRAP04437 139 aa9.59□□□□□ -0.87
CAPRIN1-202ENST00000389645 C3orf79P0CE67 100 aa9.59□□□□□ -0.87
CAPRIN1-202ENST00000389645 C8orf46Q8TAG6 207 aa9.59□□□□□ -0.87
CAPRIN1-202ENST00000389645 TSKUQ8WUA8 353 aa9.59□□□□□ -0.87
CAPRIN1-202ENST00000389645 CHODLQ9H9P2 273 aa9.59□□□□□ -0.87
CAPRIN1-202ENST00000389645 DPM3Q9P2X0 92 aa9.59□□□□□ -0.87
CAPRIN1-202ENST00000389645 KAAG1Q9UBP8 84 aa9.59□□□□□ -0.87
CAPRIN1-202ENST00000389645 SMIM27A0A1W2PRY6 76 aa9.59□□□□□ -0.87
CAPRIN1-202ENST00000389645 PSMB11A5LHX3 300 aa9.59□□□□□ -0.87
CAPRIN1-202ENST00000389645 CEACAM3P40198 252 aa9.59□□□□□ -0.87
CAPRIN1-202ENST00000389645 DLX6P56179 175 aa9.59□□□□□ -0.87
CAPRIN1-202ENST00000389645 SAMD13Q5VXD3 122 aa9.59□□□□□ -0.87
CAPRIN1-202ENST00000389645 C11orf71Q6IPW1 123 aa9.59□□□□□ -0.87
CAPRIN1-202ENST00000389645 LINC00322Q6ZN03 302 aaPredicted RBP9.59□□□□□ -0.87
CAPRIN1-202ENST00000389645 TMUB1Q9BVT8 246 aa9.59□□□□□ -0.87
CAPRIN1-202ENST00000389645 RPP21Q9H633 154 aaKnown RBP9.59□□□□□ -0.87
CAPRIN1-202ENST00000389645 ARL2-SNX15V9GYD0 113 aa9.59□□□□□ -0.87
CAPRIN1-202ENST00000389645 OR2J3O76001 311 aa9.58□□□□□ -0.88
CAPRIN1-202ENST00000389645 COX19Q49B96 90 aa9.58□□□□□ -0.88
CAPRIN1-202ENST00000389645 IGFL4Q6B9Z1 124 aa9.58□□□□□ -0.88
CAPRIN1-202ENST00000389645 C18orf32Q8TCD1 76 aa9.58□□□□□ -0.88
CAPRIN1-202ENST00000389645 TRGV9Q99603 122 aa9.58□□□□□ -0.88
CAPRIN1-202ENST00000389645 Q0VG73 95 aa9.58□□□□□ -0.88
CAPRIN1-202ENST00000389645 BPIFA4PQ86YQ2 179 aa9.58□□□□□ -0.88
CAPRIN1-202ENST00000389645 OR4B1Q8NGF8 309 aa9.58□□□□□ -0.88
CAPRIN1-202ENST00000389645 SMIM12Q96EX1 92 aa9.58□□□□□ -0.88
CAPRIN1-202ENST00000389645 TRAV30A0A087WSZ9 112 aa9.58□□□□□ -0.88
CAPRIN1-202ENST00000389645 NUDT3O95989 172 aa9.58□□□□□ -0.88
CAPRIN1-202ENST00000389645 ECSCRQ19T08 205 aa9.58□□□□□ -0.88
CAPRIN1-202ENST00000389645 Q71RC1 249 aaPredicted RBP9.58□□□□□ -0.88
CAPRIN1-202ENST00000389645 THAP8Q8NA92 274 aa9.58□□□□□ -0.88
CAPRIN1-202ENST00000389645 IGLV1-47P01700 117 aa9.57□□□□□ -0.88
CAPRIN1-202ENST00000389645 CT45A10P0DMU9 189 aa9.57□□□□□ -0.88
CAPRIN1-202ENST00000389645 HBBP68871 147 aa9.57□□□□□ -0.88
CAPRIN1-202ENST00000389645 IGHV3-66A0A0C4DH42 116 aa9.57□□□□□ -0.88
CAPRIN1-202ENST00000389645 K7EQM0 130 aa9.57□□□□□ -0.88
CAPRIN1-202ENST00000389645 NBR2O15453 112 aa9.57□□□□□ -0.88
CAPRIN1-202ENST00000389645 IGLC1P0CG04 106 aa9.57□□□□□ -0.88
CAPRIN1-202ENST00000389645 GDF5OSQ5U4N7 250 aa9.57□□□□□ -0.88
CAPRIN1-202ENST00000389645 IGHV3-49A0A0A0MS15 119 aa9.57□□□□□ -0.88
CAPRIN1-202ENST00000389645 TMEM116Q8NCL8 245 aa9.57□□□□□ -0.88
CAPRIN1-202ENST00000389645 CHD6Q8TD26 2715 aa9.56□□□□□ -0.88
CAPRIN1-202ENST00000389645 IGHV3OR16-10A0A075B7F0 116 aa9.56□□□□□ -0.88
CAPRIN1-202ENST00000389645 LOC389332A0A1B0GUA5 103 aa9.56□□□□□ -0.88
CAPRIN1-202ENST00000389645 OR10J3Q5JRS4 329 aa9.56□□□□□ -0.88
CAPRIN1-202ENST00000389645 FAM71F2Q6NXP2 309 aa9.56□□□□□ -0.88
CAPRIN1-202ENST00000389645 SORL1Q92673 2214 aa9.56□□□□□ -0.88
CAPRIN1-202ENST00000389645 RNF125Q96EQ8 232 aa9.56□□□□□ -0.88
CAPRIN1-202ENST00000389645 AAMDCQ9H7C9 122 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms