RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 SGK494Q96LW2 274 aa19.5■□□□□ 0.71
SHOX2-201ENST00000389589 GATCO43716 136 aaKnown RBP19.49■□□□□ 0.71
SHOX2-201ENST00000389589 ZNF253O75346 499 aa19.49■□□□□ 0.71
SHOX2-201ENST00000389589 RPL15P61313 204 aaKnown RBP19.49■□□□□ 0.71
SHOX2-201ENST00000389589 Q86TA4 180 aa19.49■□□□□ 0.71
SHOX2-201ENST00000389589 ARL6IP6Q8N6S5 226 aa19.49■□□□□ 0.71
SHOX2-201ENST00000389589 HOXA5P20719 270 aa19.48■□□□□ 0.71
SHOX2-201ENST00000389589 APCP25054 2843 aa19.48■□□□□ 0.71
SHOX2-201ENST00000389589 ZFHX3Q15911 3703 aa19.48■□□□□ 0.71
SHOX2-201ENST00000389589 SMIM27A0A1W2PRY6 76 aa19.48■□□□□ 0.71
SHOX2-201ENST00000389589 Q6ZS46 218 aa19.48■□□□□ 0.71
SHOX2-201ENST00000389589 NUDT10Q8NFP7 164 aa19.48■□□□□ 0.71
SHOX2-201ENST00000389589 NUDT11Q96G61 164 aa19.48■□□□□ 0.71
SHOX2-201ENST00000389589 METTL26Q96S19 204 aa19.48■□□□□ 0.71
SHOX2-201ENST00000389589 TENM4Q6N022 2769 aa19.47■□□□□ 0.71
SHOX2-201ENST00000389589 IGHV3OR16-8A0A075B7F1 116 aa19.47■□□□□ 0.71
SHOX2-201ENST00000389589 SERTM2A0A1B0GWG4 89 aa19.47■□□□□ 0.71
SHOX2-201ENST00000389589 BUB3O43684 328 aa19.47■□□□□ 0.71
SHOX2-201ENST00000389589 IGLV1-40P01703 118 aa19.47■□□□□ 0.71
SHOX2-201ENST00000389589 C1orf194Q5T5A4 169 aa19.47■□□□□ 0.71
SHOX2-201ENST00000389589 TMEM183AQ8IXX5 376 aa19.47■□□□□ 0.71
SHOX2-201ENST00000389589 ZNF492Q9P255 531 aa19.47■□□□□ 0.71
SHOX2-201ENST00000389589 TRAPPC1Q9Y5R8 145 aa19.47■□□□□ 0.71
SHOX2-201ENST00000389589 CLPSL1A2RUU4 121 aa19.47■□□□□ 0.71
SHOX2-201ENST00000389589 DIRC3C9JPN6 131 aa19.47■□□□□ 0.71
SHOX2-201ENST00000389589 IGLV2-11P01706 119 aa19.47■□□□□ 0.71
SHOX2-201ENST00000389589 ARL3P36405 182 aa19.47■□□□□ 0.71
SHOX2-201ENST00000389589 CSN1S1P47710 185 aa19.47■□□□□ 0.71
SHOX2-201ENST00000389589 PRR27Q6MZM9 219 aa19.47■□□□□ 0.71
SHOX2-201ENST00000389589 GRAMD2BQ96HH9 432 aa19.47■□□□□ 0.71
SHOX2-201ENST00000389589 SMAD5-AS1Q9Y6J3 95 aa19.47■□□□□ 0.71
SHOX2-201ENST00000389589 A0A0G2JLM5 398 aa19.46■□□□□ 0.71
SHOX2-201ENST00000389589 PF4V1P10720 104 aa19.46■□□□□ 0.71
SHOX2-201ENST00000389589 CFHR3Q02985 330 aa19.46■□□□□ 0.71
SHOX2-201ENST00000389589 Q6YL49 198 aa19.46■□□□□ 0.71
SHOX2-201ENST00000389589 VPREB3Q9UKI3 123 aa19.45■□□□□ 0.7
SHOX2-201ENST00000389589 A0A087X0K7 114 aa19.45■□□□□ 0.7
SHOX2-201ENST00000389589 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.45■□□□□ 0.7
SHOX2-201ENST00000389589 ZFP30Q9Y2G7 519 aa19.45■□□□□ 0.7
SHOX2-201ENST00000389589 TRAV8-1A0A0A6YYK1 113 aa19.44■□□□□ 0.7
SHOX2-201ENST00000389589 CDX1P47902 265 aaPredicted RBP19.44■□□□□ 0.7
SHOX2-201ENST00000389589 PSG3Q16557 428 aa19.44■□□□□ 0.7
SHOX2-201ENST00000389589 PRNTQ86SH4 94 aa19.44■□□□□ 0.7
SHOX2-201ENST00000389589 CREBBPQ92793 2442 aa19.44■□□□□ 0.7
SHOX2-201ENST00000389589 S100A8P05109 93 aa19.44■□□□□ 0.7
SHOX2-201ENST00000389589 COX19Q49B96 90 aa19.44■□□□□ 0.7
SHOX2-201ENST00000389589 U3KQE9 123 aa19.43■□□□□ 0.7
SHOX2-201ENST00000389589 M0R3E3 92 aa19.42■□□□□ 0.7
SHOX2-201ENST00000389589 KLK15Q9H2R5 256 aa19.42■□□□□ 0.7
SHOX2-201ENST00000389589 PRDM13Q9H4Q3 707 aa19.42■□□□□ 0.7
SHOX2-201ENST00000389589 PSG8Q9UQ74 426 aa19.42■□□□□ 0.7
SHOX2-201ENST00000389589 C19orf71A6NCJ1 209 aa19.42■□□□□ 0.7
SHOX2-201ENST00000389589 ZNF785A8K8V0 405 aa19.42■□□□□ 0.7
SHOX2-201ENST00000389589 NDUFA4O00483 81 aa19.42■□□□□ 0.7
SHOX2-201ENST00000389589 LINC00518Q8N0U6 118 aa19.42■□□□□ 0.7
SHOX2-201ENST00000389589 DAZAP1Q96EP5 407 aaKnown RBP19.42■□□□□ 0.7
SHOX2-201ENST00000389589 IZUMO1RA6ND01 250 aa19.41■□□□□ 0.7
SHOX2-201ENST00000389589 CT83Q5H943 113 aa19.41■□□□□ 0.7
SHOX2-201ENST00000389589 PRSS22Q9GZN4 317 aa19.41■□□□□ 0.7
SHOX2-201ENST00000389589 ZANQ9Y493 2812 aa19.41■□□□□ 0.7
SHOX2-201ENST00000389589 FBLL1A6NHQ2 334 aaKnown RBP19.4■□□□□ 0.7
SHOX2-201ENST00000389589 MEOX2P50222 304 aa19.4■□□□□ 0.7
SHOX2-201ENST00000389589 TCL1AP56279 114 aa19.4■□□□□ 0.7
SHOX2-201ENST00000389589 WDR73Q6P4I2 378 aa19.4■□□□□ 0.7
SHOX2-201ENST00000389589 TSKUQ8WUA8 353 aa19.4■□□□□ 0.7
SHOX2-201ENST00000389589 RPP21Q9H633 154 aaKnown RBP19.4■□□□□ 0.7
SHOX2-201ENST00000389589 ZNF331Q9NQX6 463 aaPredicted RBP19.4■□□□□ 0.7
SHOX2-201ENST00000389589 TMEM89A2RUT3 159 aa19.4■□□□□ 0.7
SHOX2-201ENST00000389589 CA1P00915 261 aaPredicted RBP19.4■□□□□ 0.7
SHOX2-201ENST00000389589 P01737 135 aa19.4■□□□□ 0.7
SHOX2-201ENST00000389589 HIST2H2BCQ6DN03 193 aa19.4■□□□□ 0.7
SHOX2-201ENST00000389589 TEX29Q8N6K0 151 aa19.4■□□□□ 0.7
SHOX2-201ENST00000389589 GNB1LQ9BYB4 327 aa19.4■□□□□ 0.7
SHOX2-201ENST00000389589 IGHG4P01861 327 aa19.39■□□□□ 0.69
SHOX2-201ENST00000389589 OR4X2Q8NGF9 303 aa19.39■□□□□ 0.69
SHOX2-201ENST00000389589 SLC50A1Q9BRV3 221 aa19.39■□□□□ 0.69
SHOX2-201ENST00000389589 NAT8BQ9UHF3 227 aa19.39■□□□□ 0.69
SHOX2-201ENST00000389589 FAM209BQ5JX69 171 aa19.39■□□□□ 0.69
SHOX2-201ENST00000389589 MT-ND6P03923 174 aa19.38■□□□□ 0.69
SHOX2-201ENST00000389589 COA6Q5JTJ3 125 aaKnown RBP19.38■□□□□ 0.69
SHOX2-201ENST00000389589 LINC00322Q6ZN03 302 aaPredicted RBP19.38■□□□□ 0.69
SHOX2-201ENST00000389589 CIARTQ8N365 385 aaPredicted RBP19.38■□□□□ 0.69
SHOX2-201ENST00000389589 A8MWL6 223 aa19.37■□□□□ 0.69
SHOX2-201ENST00000389589 TRBV12-3P01733 135 aa19.37■□□□□ 0.69
SHOX2-201ENST00000389589 IGHV3-11P01762 117 aa19.37■□□□□ 0.69
SHOX2-201ENST00000389589 CBLN1P23435 193 aa19.37■□□□□ 0.69
SHOX2-201ENST00000389589 GBGT1Q8N5D6 347 aa19.37■□□□□ 0.69
SHOX2-201ENST00000389589 XKRY2A2RUG3 117 aa19.37■□□□□ 0.69
SHOX2-201ENST00000389589 ZNF207O43670 478 aaKnown RBP19.37■□□□□ 0.69
SHOX2-201ENST00000389589 APOHP02749 345 aaPredicted RBP19.37■□□□□ 0.69
SHOX2-201ENST00000389589 TMEM95Q3KNT9 176 aa19.37■□□□□ 0.69
SHOX2-201ENST00000389589 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa19.37■□□□□ 0.69
SHOX2-201ENST00000389589 WFDC11Q8NEX6 87 aa19.37■□□□□ 0.69
SHOX2-201ENST00000389589 OR4B1Q8NGF8 309 aa19.37■□□□□ 0.69
SHOX2-201ENST00000389589 CHEK1O14757 476 aa19.36■□□□□ 0.69
SHOX2-201ENST00000389589 PSMB8P28062 276 aa19.36■□□□□ 0.69
SHOX2-201ENST00000389589 RASL11AQ6T310 242 aa19.36■□□□□ 0.69
SHOX2-201ENST00000389589 HIST3H2BBQ8N257 126 aa19.36■□□□□ 0.69
SHOX2-201ENST00000389589 MRPL18Q9H0U6 180 aaKnown RBP19.36■□□□□ 0.69
SHOX2-201ENST00000389589 IGHV3-66A0A0C4DH42 116 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms