RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 ZFHX2Q9C0A1 2572 aaPredicted RBP11.06□□□□□ -0.64
SDC1-202ENST00000381150 ZGRF1Q86YA3 2104 aa11.06□□□□□ -0.64
SDC1-202ENST00000381150 A0A1W2PPM0 123 aa11.06□□□□□ -0.64
SDC1-202ENST00000381150 FNDC10F2Z333 226 aa11.06□□□□□ -0.64
SDC1-202ENST00000381150 RPS20P60866 119 aaKnown RBP11.06□□□□□ -0.64
SDC1-202ENST00000381150 BCL6BQ8N143 479 aaPredicted RBP11.06□□□□□ -0.64
SDC1-202ENST00000381150 FAM57AQ8TBR7 257 aa11.06□□□□□ -0.64
SDC1-202ENST00000381150 NPFFR1Q9GZQ6 430 aa11.06□□□□□ -0.64
SDC1-202ENST00000381150 AMTNQ6UX39 209 aa11.06□□□□□ -0.64
SDC1-202ENST00000381150 NCOR1P1Q9H4R4 102 aa11.06□□□□□ -0.64
SDC1-202ENST00000381150 DKK2Q9UBU2 259 aa11.06□□□□□ -0.64
SDC1-202ENST00000381150 ZZEF1O43149 2961 aa11.06□□□□□ -0.64
SDC1-202ENST00000381150 CUBNO60494 3623 aa11.05□□□□□ -0.64
SDC1-202ENST00000381150 M0R3E3 92 aa11.05□□□□□ -0.64
SDC1-202ENST00000381150 TNFRSF1AP19438 455 aa11.05□□□□□ -0.64
SDC1-202ENST00000381150 SMAD7O15105 426 aaKnown RBP11.05□□□□□ -0.64
SDC1-202ENST00000381150 SMIM13P0DJ93 91 aa11.05□□□□□ -0.64
SDC1-202ENST00000381150 RBPJQ06330 500 aa11.05□□□□□ -0.64
SDC1-202ENST00000381150 SH2D6Q7Z4S9 175 aa11.05□□□□□ -0.64
SDC1-202ENST00000381150 CACNG8Q8WXS5 425 aa11.05□□□□□ -0.64
SDC1-202ENST00000381150 C17orf77Q96MU5 243 aa11.05□□□□□ -0.64
SDC1-202ENST00000381150 NDFIP1Q9BT67 221 aa11.05□□□□□ -0.64
SDC1-202ENST00000381150 RAI1Q7Z5J4 1906 aaPredicted RBP11.05□□□□□ -0.64
SDC1-202ENST00000381150 ADAMTSL5Q6ZMM2 481 aa11.04□□□□□ -0.64
SDC1-202ENST00000381150 PRELID3AQ96N28 172 aa11.04□□□□□ -0.64
SDC1-202ENST00000381150 ZNF714Q96N38 554 aa11.04□□□□□ -0.64
SDC1-202ENST00000381150 SIGMAR1Q99720 223 aa11.04□□□□□ -0.64
SDC1-202ENST00000381150 RPUSD1Q9UJJ7 312 aaKnown RBP11.04□□□□□ -0.64
SDC1-202ENST00000381150 IGHV1-46P01743 117 aa11.04□□□□□ -0.64
SDC1-202ENST00000381150 NBL1P41271 181 aa11.04□□□□□ -0.64
SDC1-202ENST00000381150 HSD52Q0P140 79 aa11.04□□□□□ -0.64
SDC1-202ENST00000381150 ETDBQ3ZM63 59 aa11.04□□□□□ -0.64
SDC1-202ENST00000381150 FMC1Q96HJ9 113 aa11.04□□□□□ -0.64
SDC1-202ENST00000381150 CUL9Q8IWT3 2517 aa11.04□□□□□ -0.64
SDC1-202ENST00000381150 CT45A10P0DMU9 189 aa11.04□□□□□ -0.64
SDC1-202ENST00000381150 LGALS7P47929 136 aa11.04□□□□□ -0.64
SDC1-202ENST00000381150 LRBAP50851 2863 aa11.04□□□□□ -0.64
SDC1-202ENST00000381150 ANKRD11Q6UB99 2663 aaPredicted RBP11.04□□□□□ -0.64
SDC1-202ENST00000381150 C22orf46C9J442 243 aa11.03□□□□□ -0.64
SDC1-202ENST00000381150 LTAP01374 205 aa11.03□□□□□ -0.64
SDC1-202ENST00000381150 CKS2P33552 79 aa11.03□□□□□ -0.64
SDC1-202ENST00000381150 STXBP6Q8NFX7 210 aa11.03□□□□□ -0.64
SDC1-202ENST00000381150 OR5AN1Q8NGI8 311 aa11.03□□□□□ -0.64
SDC1-202ENST00000381150 C7orf69Q9H7B7 122 aa11.03□□□□□ -0.64
SDC1-202ENST00000381150 PSMB11A5LHX3 300 aa11.03□□□□□ -0.64
SDC1-202ENST00000381150 CD40P25942 277 aa11.03□□□□□ -0.64
SDC1-202ENST00000381150 FXYD2P54710 66 aa11.03□□□□□ -0.64
SDC1-202ENST00000381150 TNFAIP6P98066 277 aaPredicted RBP11.03□□□□□ -0.64
SDC1-202ENST00000381150 PLGLAQ15195 96 aa11.03□□□□□ -0.64
SDC1-202ENST00000381150 UFSP1Q6NVU6 142 aa11.03□□□□□ -0.64
SDC1-202ENST00000381150 NDUFA4L2Q9NRX3 87 aa11.03□□□□□ -0.64
SDC1-202ENST00000381150 SIGLEC8Q9NYZ4 499 aa11.03□□□□□ -0.64
SDC1-202ENST00000381150 WFDC2Q14508 124 aa11.03□□□□□ -0.64
SDC1-202ENST00000381150 GTSCR1Q86UQ5 136 aa11.03□□□□□ -0.64
SDC1-202ENST00000381150 APC2O95996 2303 aa11.02□□□□□ -0.64
SDC1-202ENST00000381150 IGKV1D-37A0A075B6S9 117 aa11.02□□□□□ -0.65
SDC1-202ENST00000381150 TWIST1Q15672 202 aa11.02□□□□□ -0.65
SDC1-202ENST00000381150 Q86TA4 180 aa11.02□□□□□ -0.65
SDC1-202ENST00000381150 IFI27L1Q96BM0 104 aa11.02□□□□□ -0.65
SDC1-202ENST00000381150 RITA1Q96K30 269 aa11.02□□□□□ -0.65
SDC1-202ENST00000381150 RAB9BQ9NP90 201 aa11.02□□□□□ -0.65
SDC1-202ENST00000381150 COL12A1Q99715 3063 aa11.02□□□□□ -0.65
SDC1-202ENST00000381150 PPIFP30405 207 aaKnown RBP11.02□□□□□ -0.65
SDC1-202ENST00000381150 ARPC1AQ92747 370 aa11.02□□□□□ -0.65
SDC1-202ENST00000381150 RNF7Q9UBF6 113 aa11.02□□□□□ -0.65
SDC1-202ENST00000381150 HIGD1AQ9Y241 93 aa11.02□□□□□ -0.65
SDC1-202ENST00000381150 CHTOPQ9Y3Y2 248 aaKnown RBP11.02□□□□□ -0.65
SDC1-202ENST00000381150 INSIG2Q9Y5U4 225 aa11.02□□□□□ -0.65
SDC1-202ENST00000381150 A0A0G2JNJ9 132 aa11.01□□□□□ -0.65
SDC1-202ENST00000381150 H3BMG7 143 aa11.01□□□□□ -0.65
SDC1-202ENST00000381150 EVI2AP22794 236 aa11.01□□□□□ -0.65
SDC1-202ENST00000381150 GAFA1Q96PS6 74 aa11.01□□□□□ -0.65
SDC1-202ENST00000381150 MLST8Q9BVC4 326 aa11.01□□□□□ -0.65
SDC1-202ENST00000381150 Q9UFV3 132 aa11.01□□□□□ -0.65
SDC1-202ENST00000381150 IGHV3OR16-8A0A075B7F1 116 aa11.01□□□□□ -0.65
SDC1-202ENST00000381150 A0A1W2PPI3 338 aa11.01□□□□□ -0.65
SDC1-202ENST00000381150 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.01□□□□□ -0.65
SDC1-202ENST00000381150 LYZL1Q6UWQ5 148 aa11.01□□□□□ -0.65
SDC1-202ENST00000381150 NUP37Q8NFH4 326 aa11.01□□□□□ -0.65
SDC1-202ENST00000381150 IGFBPL1Q8WX77 278 aa11.01□□□□□ -0.65
SDC1-202ENST00000381150 COL25A1Q9BXS0 654 aaPredicted RBP11.01□□□□□ -0.65
SDC1-202ENST00000381150 LINC00574Q9H8X3 128 aa11.01□□□□□ -0.65
SDC1-202ENST00000381150 SOX21Q9Y651 276 aaPredicted RBP11.01□□□□□ -0.65
SDC1-202ENST00000381150 Q8NA96 180 aa11.01□□□□□ -0.65
SDC1-202ENST00000381150 PRSS22Q9GZN4 317 aa11.01□□□□□ -0.65
SDC1-202ENST00000381150 TMEM160Q9NX00 188 aa11.01□□□□□ -0.65
SDC1-202ENST00000381150 SH3BGRL2Q9UJC5 107 aa11.01□□□□□ -0.65
SDC1-202ENST00000381150 C19orf71A6NCJ1 209 aa11□□□□□ -0.65
SDC1-202ENST00000381150 ABHD17AQ96GS6 310 aa11□□□□□ -0.65
SDC1-202ENST00000381150 C8orf49Q96NF6 230 aa11□□□□□ -0.65
SDC1-202ENST00000381150 OR5A1Q8NGJ0 315 aa11□□□□□ -0.65
SDC1-202ENST00000381150 OR4C13Q8NGP0 309 aa11□□□□□ -0.65
SDC1-202ENST00000381150 CCL17Q92583 94 aa11□□□□□ -0.65
SDC1-202ENST00000381150 ATP5G2Q06055 141 aa10.99□□□□□ -0.65
SDC1-202ENST00000381150 IGFL4Q6B9Z1 124 aa10.99□□□□□ -0.65
SDC1-202ENST00000381150 OSR1Q8TAX0 266 aaPredicted RBP10.99□□□□□ -0.65
SDC1-202ENST00000381150 TNFRSF14Q92956 283 aa10.99□□□□□ -0.65
SDC1-202ENST00000381150 PRSS47A8MTI9 375 aa10.99□□□□□ -0.65
SDC1-202ENST00000381150 FGF6P10767 208 aa10.99□□□□□ -0.65
SDC1-202ENST00000381150 CNTFRP26992 372 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms