RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 CREBBPQ92793 2442 aa8.84□□□□□ -0.99
LINC00654-201ENST00000379053 UBE2CO00762 179 aa8.84□□□□□ -0.99
LINC00654-201ENST00000379053 TCTEX1D4Q5JR98 221 aa8.84□□□□□ -0.99
LINC00654-201ENST00000379053 ANAPC13Q9BS18 74 aa8.84□□□□□ -0.99
LINC00654-201ENST00000379053 ZNRD1Q9P1U0 126 aa8.84□□□□□ -0.99
LINC00654-201ENST00000379053 SCN8AQ9UQD0 1980 aa8.84□□□□□ -0.99
LINC00654-201ENST00000379053 GAGE12JA6NER3 117 aa8.84□□□□□ -0.99
LINC00654-201ENST00000379053 J3QRE1 110 aa8.84□□□□□ -0.99
LINC00654-201ENST00000379053 GAGE1Q13065 139 aa8.84□□□□□ -0.99
LINC00654-201ENST00000379053 GAGE4Q13068 117 aa8.84□□□□□ -0.99
LINC00654-201ENST00000379053 GAGE5Q13069 117 aa8.84□□□□□ -0.99
LINC00654-201ENST00000379053 GAGE13Q4V321 117 aa8.84□□□□□ -0.99
LINC00654-201ENST00000379053 IFI27L1Q96BM0 104 aa8.84□□□□□ -0.99
LINC00654-201ENST00000379053 DICER1Q9UPY3 1922 aaKnown RBP8.84□□□□□ -0.99
LINC00654-201ENST00000379053 HIST1H2BKO60814 126 aa8.84□□□□□ -0.99
LINC00654-201ENST00000379053 HIST1H2BJP06899 126 aa8.84□□□□□ -0.99
LINC00654-201ENST00000379053 HIST1H2BOP23527 126 aa8.84□□□□□ -0.99
LINC00654-201ENST00000379053 MPZP25189 248 aa8.84□□□□□ -0.99
LINC00654-201ENST00000379053 HIST1H2BBP33778 126 aa8.84□□□□□ -0.99
LINC00654-201ENST00000379053 HIST1H2BDP58876 126 aa8.84□□□□□ -0.99
LINC00654-201ENST00000379053 HIST1H2BCP62807 126 aa8.84□□□□□ -0.99
LINC00654-201ENST00000379053 HIST2H2BEQ16778 126 aa8.84□□□□□ -0.99
LINC00654-201ENST00000379053 SPINK13Q1W4C9 94 aa8.84□□□□□ -0.99
LINC00654-201ENST00000379053 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.84□□□□□ -0.99
LINC00654-201ENST00000379053 HIST1H2BHQ93079 126 aa8.84□□□□□ -0.99
LINC00654-201ENST00000379053 HIST1H2BNQ99877 126 aa8.84□□□□□ -0.99
LINC00654-201ENST00000379053 HIST1H2BMQ99879 126 aa8.84□□□□□ -0.99
LINC00654-201ENST00000379053 LHBP01229 141 aa8.84□□□□□ -0.99
LINC00654-201ENST00000379053 DOCK10Q96BY6 2186 aa8.84□□□□□ -0.99
LINC00654-201ENST00000379053 DKK1O94907 266 aa8.83□□□□□ -1
LINC00654-201ENST00000379053 ADMP35318 185 aa8.83□□□□□ -1
LINC00654-201ENST00000379053 CSTL1Q9H114 145 aa8.83□□□□□ -1
LINC00654-201ENST00000379053 NHP2Q9NX24 153 aaKnown RBP8.83□□□□□ -1
LINC00654-201ENST00000379053 M0R2P5 195 aa8.83□□□□□ -1
LINC00654-201ENST00000379053 TRBV6-6A0A0A6YYG2 114 aa8.83□□□□□ -1
LINC00654-201ENST00000379053 D6R8Y8 96 aa8.83□□□□□ -1
LINC00654-201ENST00000379053 C1QL4Q86Z23 238 aa8.83□□□□□ -1
LINC00654-201ENST00000379053 TMEM170AQ8WVE7 144 aa8.83□□□□□ -1
LINC00654-201ENST00000379053 GFI1Q99684 422 aa8.83□□□□□ -1
LINC00654-201ENST00000379053 SLC25A2Q9BXI2 301 aa8.83□□□□□ -1
LINC00654-201ENST00000379053 LAMTOR3Q9UHA4 124 aa8.83□□□□□ -1
LINC00654-201ENST00000379053 WNK2Q9Y3S1 2297 aa8.83□□□□□ -1
LINC00654-201ENST00000379053 Q8TCH9 128 aa8.83□□□□□ -1
LINC00654-201ENST00000379053 WFDC1Q9HC57 220 aa8.83□□□□□ -1
LINC00654-201ENST00000379053 GAGE12BA1L429 117 aa8.83□□□□□ -1
LINC00654-201ENST00000379053 H0YIZ8 118 aa8.83□□□□□ -1
LINC00654-201ENST00000379053 GAGE7O76087 117 aa8.83□□□□□ -1
LINC00654-201ENST00000379053 GAGE12FP0CL80 117 aa8.83□□□□□ -1
LINC00654-201ENST00000379053 GAGE12GP0CL81 117 aa8.83□□□□□ -1
LINC00654-201ENST00000379053 GAGE12IP0CL82 117 aa8.83□□□□□ -1
LINC00654-201ENST00000379053 NDUFB8O95169 186 aa8.82□□□□□ -1
LINC00654-201ENST00000379053 PAX9P55771 341 aa8.82□□□□□ -1
LINC00654-201ENST00000379053 SRSF3P84103 164 aaKnown RBP8.82□□□□□ -1
LINC00654-201ENST00000379053 LYPD1Q8N2G4 141 aa8.82□□□□□ -1
LINC00654-201ENST00000379053 DLX4Q92988 240 aaPredicted RBP8.82□□□□□ -1
LINC00654-201ENST00000379053 TMEM238C9JI98 176 aa8.82□□□□□ -1
LINC00654-201ENST00000379053 RNASE2P10153 161 aaKnown RBP8.82□□□□□ -1
LINC00654-201ENST00000379053 PCNX1Q96RV3 2341 aa8.82□□□□□ -1
LINC00654-201ENST00000379053 TCF20Q9UGU0 1960 aaKnown RBP8.82□□□□□ -1
LINC00654-201ENST00000379053 FAM208BQ5VWN6 2430 aa8.82□□□□□ -1
LINC00654-201ENST00000379053 A0A1W2PPI3 338 aa8.82□□□□□ -1
LINC00654-201ENST00000379053 NMSQ5H8A3 153 aa8.82□□□□□ -1
LINC00654-201ENST00000379053 PLEKHB2Q96CS7 222 aa8.82□□□□□ -1
LINC00654-201ENST00000379053 ARID2Q68CP9 1835 aa8.82□□□□□ -1
LINC00654-201ENST00000379053 C9orf66Q5T8R8 295 aa8.82□□□□□ -1
LINC00654-201ENST00000379053 AGMATQ9BSE5 352 aa8.82□□□□□ -1
LINC00654-201ENST00000379053 KIF26BQ2KJY2 2108 aa8.82□□□□□ -1
LINC00654-201ENST00000379053 TRAV8-1A0A0A6YYK1 113 aa8.81□□□□□ -1
LINC00654-201ENST00000379053 IGHV3-16A0A0C4DH30 117 aa8.81□□□□□ -1
LINC00654-201ENST00000379053 IGF2-ASQ6U949 168 aa8.81□□□□□ -1
LINC00654-201ENST00000379053 HIST1H2BLQ99880 126 aa8.81□□□□□ -1
LINC00654-201ENST00000379053 PI4KAP42356 2102 aa8.81□□□□□ -1
LINC00654-201ENST00000379053 PRR31Q5SQ13 230 aa8.81□□□□□ -1
LINC00654-201ENST00000379053 LY6G6FQ5SQ64 297 aa8.81□□□□□ -1
LINC00654-201ENST00000379053 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.81□□□□□ -1
LINC00654-201ENST00000379053 RASL11AQ6T310 242 aa8.81□□□□□ -1
LINC00654-201ENST00000379053 KLK9Q9UKQ9 250 aa8.81□□□□□ -1
LINC00654-201ENST00000379053 FAM215AQ9Y5M1 114 aa8.81□□□□□ -1
LINC00654-201ENST00000379053 MAJINQ3KP22 176 aa8.81□□□□□ -1
LINC00654-201ENST00000379053 FOXL2NBQ6ZUU3 175 aa8.81□□□□□ -1
LINC00654-201ENST00000379053 SHANK2-AS3Q9BTD1 123 aa8.81□□□□□ -1
LINC00654-201ENST00000379053 ANAPC10Q9UM13 185 aa8.81□□□□□ -1
LINC00654-201ENST00000379053 RHODO00212 210 aa8.81□□□□□ -1
LINC00654-201ENST00000379053 AZU1P20160 251 aa8.81□□□□□ -1
LINC00654-201ENST00000379053 NTF4P34130 210 aa8.81□□□□□ -1
LINC00654-201ENST00000379053 MLANAQ16655 118 aa8.81□□□□□ -1
LINC00654-201ENST00000379053 MS4A6AQ9H2W1 248 aa8.81□□□□□ -1
LINC00654-201ENST00000379053 LIME1Q9H400 295 aa8.81□□□□□ -1
LINC00654-201ENST00000379053 RALGAPA2Q2PPJ7 1873 aa8.81□□□□□ -1
LINC00654-201ENST00000379053 NOTCH2Q04721 2471 aa8.81□□□□□ -1
LINC00654-201ENST00000379053 LHFPL1Q86WI0 220 aa8.81□□□□□ -1
LINC00654-201ENST00000379053 DLEU1O43261 78 aa8.8□□□□□ -1
LINC00654-201ENST00000379053 DMRTC2Q8IXT2 367 aaPredicted RBP8.8□□□□□ -1
LINC00654-201ENST00000379053 CHCHD1Q96BP2 118 aaKnown RBP8.8□□□□□ -1
LINC00654-201ENST00000379053 GNB1LQ9BYB4 327 aa8.8□□□□□ -1
LINC00654-201ENST00000379053 HEATR1Q9H583 2144 aaKnown RBP8.8□□□□□ -1
LINC00654-201ENST00000379053 ZFHX2Q9C0A1 2572 aaPredicted RBP8.8□□□□□ -1
LINC00654-201ENST00000379053 LOXP28300 417 aaPredicted RBP8.8□□□□□ -1
LINC00654-201ENST00000379053 TMEM14EPQ6UXP3 125 aa8.8□□□□□ -1
LINC00654-201ENST00000379053 BDP1A6H8Y1 2624 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms