RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 CD24P25063 80 aa6.5□□□□□ -1.37
PTPRR-203ENST00000378778 TWIST1Q15672 202 aa6.5□□□□□ -1.37
PTPRR-203ENST00000378778 FAM216BQ8N7L0 139 aa6.5□□□□□ -1.37
PTPRR-203ENST00000378778 PHLDA1Q8WV24 401 aaPredicted RBP6.5□□□□□ -1.37
PTPRR-203ENST00000378778 ATP6V0BQ99437 205 aa6.5□□□□□ -1.37
PTPRR-203ENST00000378778 REV3LO60673 3130 aa6.49□□□□□ -1.37
PTPRR-203ENST00000378778 M0R1B8 84 aa6.49□□□□□ -1.37
PTPRR-203ENST00000378778 SLC25A17O43808 307 aa6.49□□□□□ -1.37
PTPRR-203ENST00000378778 WT1P19544 449 aaPredicted RBP6.49□□□□□ -1.37
PTPRR-203ENST00000378778 CEND1Q8N111 149 aa6.49□□□□□ -1.37
PTPRR-203ENST00000378778 BCL6BQ8N143 479 aaPredicted RBP6.49□□□□□ -1.37
PTPRR-203ENST00000378778 SGK494Q96LW2 274 aa6.49□□□□□ -1.37
PTPRR-203ENST00000378778 CHAC1Q9BUX1 264 aa6.49□□□□□ -1.37
PTPRR-203ENST00000378778 KAAG1Q9UBP8 84 aa6.49□□□□□ -1.37
PTPRR-203ENST00000378778 TNCP24821 2201 aa6.49□□□□□ -1.37
PTPRR-203ENST00000378778 PPIAL4CA0A0B4J2A2 164 aa6.49□□□□□ -1.37
PTPRR-203ENST00000378778 GAGE12HA6NDE8 117 aa6.49□□□□□ -1.37
PTPRR-203ENST00000378778 I3L2K1 104 aa6.49□□□□□ -1.37
PTPRR-203ENST00000378778 DPM2O94777 84 aa6.49□□□□□ -1.37
PTPRR-203ENST00000378778 IGKCP01834 107 aa6.49□□□□□ -1.37
PTPRR-203ENST00000378778 CKS2P33552 79 aa6.49□□□□□ -1.37
PTPRR-203ENST00000378778 LYZP61626 148 aa6.49□□□□□ -1.37
PTPRR-203ENST00000378778 KLF17Q5JT82 389 aaPredicted RBP6.49□□□□□ -1.37
PTPRR-203ENST00000378778 ASPHD1Q5U4P2 390 aa6.49□□□□□ -1.37
PTPRR-203ENST00000378778 TMEM200BQ69YZ2 307 aa6.49□□□□□ -1.37
PTPRR-203ENST00000378778 LYZL1Q6UWQ5 148 aa6.49□□□□□ -1.37
PTPRR-203ENST00000378778 ZNF562Q6V9R5 426 aa6.49□□□□□ -1.37
PTPRR-203ENST00000378778 PCNX2A6NKB5 2137 aa6.49□□□□□ -1.37
PTPRR-203ENST00000378778 WDFY4Q6ZS81 3184 aa6.49□□□□□ -1.37
PTPRR-203ENST00000378778 A0A1W2PRD5 423 aa6.48□□□□□ -1.37
PTPRR-203ENST00000378778 A0A1W2PRF3 423 aa6.48□□□□□ -1.37
PTPRR-203ENST00000378778 A0A1W2PRM7 423 aa6.48□□□□□ -1.37
PTPRR-203ENST00000378778 TNFRSF13BO14836 293 aaPredicted RBP6.48□□□□□ -1.37
PTPRR-203ENST00000378778 MRPS12O15235 138 aaKnown RBP6.48□□□□□ -1.37
PTPRR-203ENST00000378778 NDUFB3O43676 98 aa6.48□□□□□ -1.37
PTPRR-203ENST00000378778 SCGB2A1O75556 95 aa6.48□□□□□ -1.37
PTPRR-203ENST00000378778 RBP4P02753 201 aa6.48□□□□□ -1.37
PTPRR-203ENST00000378778 IGLC6P0CF74 106 aa6.48□□□□□ -1.37
PTPRR-203ENST00000378778 AZU1P20160 251 aa6.48□□□□□ -1.37
PTPRR-203ENST00000378778 DLX6P56179 175 aa6.48□□□□□ -1.37
PTPRR-203ENST00000378778 RPL24P83731 157 aaKnown RBP6.48□□□□□ -1.37
PTPRR-203ENST00000378778 TMEM105Q8N8V8 129 aa6.48□□□□□ -1.37
PTPRR-203ENST00000378778 SPANXB1Q9NS25 103 aaPredicted RBP6.48□□□□□ -1.37
PTPRR-203ENST00000378778 SIGLEC9Q9Y336 463 aa6.48□□□□□ -1.37
PTPRR-203ENST00000378778 HILPDAQ9Y5L2 63 aa6.48□□□□□ -1.37
PTPRR-203ENST00000378778 TEX48A0A1B0GUV7 120 aa6.48□□□□□ -1.37
PTPRR-203ENST00000378778 A0A1B0GWB2 263 aa6.48□□□□□ -1.37
PTPRR-203ENST00000378778 WI2-2373I1.2A0A1W2PRP0 233 aa6.48□□□□□ -1.37
PTPRR-203ENST00000378778 NMUP48645 174 aa6.48□□□□□ -1.37
PTPRR-203ENST00000378778 CRIP1P50238 77 aa6.48□□□□□ -1.37
PTPRR-203ENST00000378778 SPRNQ5BIV9 151 aa6.48□□□□□ -1.37
PTPRR-203ENST00000378778 C10orf55Q5SWW7 151 aa6.48□□□□□ -1.37
PTPRR-203ENST00000378778 C1orf185Q5T7R7 199 aa6.48□□□□□ -1.37
PTPRR-203ENST00000378778 MCRIP2Q9BUT9 160 aaKnown RBP6.48□□□□□ -1.37
PTPRR-203ENST00000378778 TRAV8-1A0A0A6YYK1 113 aa6.47□□□□□ -1.37
PTPRR-203ENST00000378778 SNAI2O43623 268 aa6.47□□□□□ -1.37
PTPRR-203ENST00000378778 CD40P25942 277 aa6.47□□□□□ -1.37
PTPRR-203ENST00000378778 TMEM155Q4W5P6 130 aa6.47□□□□□ -1.37
PTPRR-203ENST00000378778 EXOC3-AS1Q8N2X6 119 aa6.47□□□□□ -1.37
PTPRR-203ENST00000378778 IGFBPL1Q8WX77 278 aa6.47□□□□□ -1.37
PTPRR-203ENST00000378778 RAB37Q96AX2 223 aa6.47□□□□□ -1.37
PTPRR-203ENST00000378778 HHLA3Q9XRX5 114 aa6.47□□□□□ -1.37
PTPRR-203ENST00000378778 PPIAL4EA0A075B759 164 aa6.47□□□□□ -1.37
PTPRR-203ENST00000378778 IGLL5B9A064 214 aa6.47□□□□□ -1.37
PTPRR-203ENST00000378778 TEX22C9J3V5 150 aa6.47□□□□□ -1.37
PTPRR-203ENST00000378778 SH2D1AO60880 128 aa6.47□□□□□ -1.37
PTPRR-203ENST00000378778 PPIAL4FP0DN26 164 aa6.47□□□□□ -1.37
PTPRR-203ENST00000378778 GCSHP23434 173 aa6.47□□□□□ -1.37
PTPRR-203ENST00000378778 DUX4L9Q6RFH8 374 aaPredicted RBP6.47□□□□□ -1.37
PTPRR-203ENST00000378778 PPP1R27Q86WC6 154 aa6.47□□□□□ -1.37
PTPRR-203ENST00000378778 PCP2Q8IVA1 136 aa6.47□□□□□ -1.37
PTPRR-203ENST00000378778 Q8N8P6 123 aa6.47□□□□□ -1.37
PTPRR-203ENST00000378778 HEATR1Q9H583 2144 aaKnown RBP6.47□□□□□ -1.37
PTPRR-203ENST00000378778 K7EMI3 77 aa6.46□□□□□ -1.37
PTPRR-203ENST00000378778 PLNP26678 52 aa6.46□□□□□ -1.37
PTPRR-203ENST00000378778 LOXL1Q08397 574 aaPredicted RBP6.46□□□□□ -1.37
PTPRR-203ENST00000378778 FOXE3Q13461 319 aa6.46□□□□□ -1.37
PTPRR-203ENST00000378778 FAM201AQ5SY85 155 aa6.46□□□□□ -1.37
PTPRR-203ENST00000378778 LYRM7Q5U5X0 104 aa6.46□□□□□ -1.37
PTPRR-203ENST00000378778 HCP5Q6MZN7 132 aa6.46□□□□□ -1.37
PTPRR-203ENST00000378778 AMN1Q8IY45 258 aa6.46□□□□□ -1.37
PTPRR-203ENST00000378778 TTC9CQ8N5M4 171 aa6.46□□□□□ -1.37
PTPRR-203ENST00000378778 DEFB108BQ8NET1 73 aa6.46□□□□□ -1.37
PTPRR-203ENST00000378778 TMEM133Q9H2Q1 129 aa6.46□□□□□ -1.37
PTPRR-203ENST00000378778 TIMM8BQ9Y5J9 83 aaPredicted RBP6.46□□□□□ -1.37
PTPRR-203ENST00000378778 TRBV25-1A0A075B6N4 114 aa6.46□□□□□ -1.38
PTPRR-203ENST00000378778 LOC389332A0A1B0GUA5 103 aa6.46□□□□□ -1.38
PTPRR-203ENST00000378778 A0A1W2PNU3 283 aaPredicted RBP6.46□□□□□ -1.38
PTPRR-203ENST00000378778 NKX2-8O15522 239 aa6.46□□□□□ -1.38
PTPRR-203ENST00000378778 IGKV1-17P01599 117 aa6.46□□□□□ -1.38
PTPRR-203ENST00000378778 FCGR2BP31994 310 aaPredicted RBP6.46□□□□□ -1.38
PTPRR-203ENST00000378778 FXYD2P54710 66 aa6.46□□□□□ -1.38
PTPRR-203ENST00000378778 RNF125Q96EQ8 232 aa6.46□□□□□ -1.38
PTPRR-203ENST00000378778 MRAP2Q96G30 205 aa6.46□□□□□ -1.38
PTPRR-203ENST00000378778 ZNF479Q96JC4 524 aa6.46□□□□□ -1.38
PTPRR-203ENST00000378778 TRAV12-1A0A0B4J245 112 aa6.46□□□□□ -1.38
PTPRR-203ENST00000378778 C17orf100A8MU93 164 aa6.46□□□□□ -1.38
PTPRR-203ENST00000378778 TMEM178BH3BS89 294 aa6.46□□□□□ -1.38
PTPRR-203ENST00000378778 NPYP01303 97 aa6.46□□□□□ -1.38
PTPRR-203ENST00000378778 IGHV1-8P0DP01 117 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms