RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 LINC00312Q9Y6C7 94 aa12.59□□□□□ -0.39
CKAP4-201ENST00000378026 CSMD1Q96PZ7 3565 aa12.59□□□□□ -0.39
CKAP4-201ENST00000378026 TMEM200BQ69YZ2 307 aa12.59□□□□□ -0.39
CKAP4-201ENST00000378026 COL25A1Q9BXS0 654 aaPredicted RBP12.59□□□□□ -0.39
CKAP4-201ENST00000378026 PLSCR4Q9NRQ2 329 aa12.59□□□□□ -0.39
CKAP4-201ENST00000378026 HBDP02042 147 aa12.58□□□□□ -0.39
CKAP4-201ENST00000378026 GLRXP35754 106 aa12.58□□□□□ -0.39
CKAP4-201ENST00000378026 TMEM133Q9H2Q1 129 aa12.58□□□□□ -0.39
CKAP4-201ENST00000378026 GVINP1Q7Z2Y8 2422 aa12.58□□□□□ -0.4
CKAP4-201ENST00000378026 IGKV2D-26A0A0A0MRZ7 120 aa12.58□□□□□ -0.4
CKAP4-201ENST00000378026 UBALD2Q8IYN6 164 aa12.58□□□□□ -0.4
CKAP4-201ENST00000378026 S4R3C0 116 aa12.58□□□□□ -0.4
CKAP4-201ENST00000378026 ZZEF1O43149 2961 aa12.58□□□□□ -0.4
CKAP4-201ENST00000378026 PRR33A8MZF0 331 aa12.58□□□□□ -0.4
CKAP4-201ENST00000378026 M0R296 226 aa12.58□□□□□ -0.4
CKAP4-201ENST00000378026 RPL27AP46776 148 aaKnown RBP12.58□□□□□ -0.4
CKAP4-201ENST00000378026 SRSF6Q13247 344 aaKnown RBP12.58□□□□□ -0.4
CKAP4-201ENST00000378026 ORMDL3Q8N138 153 aa12.58□□□□□ -0.4
CKAP4-201ENST00000378026 NHP2Q9NX24 153 aaKnown RBP12.58□□□□□ -0.4
CKAP4-201ENST00000378026 TSSC4Q9Y5U2 329 aaPredicted RBP12.58□□□□□ -0.4
CKAP4-201ENST00000378026 INS-IGF2F8WCM5 200 aa12.57□□□□□ -0.4
CKAP4-201ENST00000378026 CKS2P33552 79 aa12.57□□□□□ -0.4
CKAP4-201ENST00000378026 MRPL51Q4U2R6 128 aaKnown RBP12.57□□□□□ -0.4
CKAP4-201ENST00000378026 DMXL1Q9Y485 3027 aa12.57□□□□□ -0.4
CKAP4-201ENST00000378026 NDUFS7O75251 213 aa12.57□□□□□ -0.4
CKAP4-201ENST00000378026 NPYP01303 97 aa12.57□□□□□ -0.4
CKAP4-201ENST00000378026 CRYGCP07315 174 aa12.57□□□□□ -0.4
CKAP4-201ENST00000378026 POLEQ07864 2286 aa12.57□□□□□ -0.4
CKAP4-201ENST00000378026 CT45A10P0DMU9 189 aa12.56□□□□□ -0.4
CKAP4-201ENST00000378026 FAM104BQ5XKR9 115 aa12.56□□□□□ -0.4
CKAP4-201ENST00000378026 DPF1Q92782 380 aa12.56□□□□□ -0.4
CKAP4-201ENST00000378026 SIGMAR1Q99720 223 aa12.56□□□□□ -0.4
CKAP4-201ENST00000378026 LINC00574Q9H8X3 128 aa12.56□□□□□ -0.4
CKAP4-201ENST00000378026 PPIAL4EA0A075B759 164 aa12.56□□□□□ -0.4
CKAP4-201ENST00000378026 FCN3O75636 299 aa12.56□□□□□ -0.4
CKAP4-201ENST00000378026 PPIAL4FP0DN26 164 aa12.56□□□□□ -0.4
CKAP4-201ENST00000378026 WFDC2Q14508 124 aa12.56□□□□□ -0.4
CKAP4-201ENST00000378026 C16orf54Q6UWD8 224 aa12.56□□□□□ -0.4
CKAP4-201ENST00000378026 TMEM108Q6UXF1 575 aa12.56□□□□□ -0.4
CKAP4-201ENST00000378026 FDCSPQ8NFU4 85 aa12.56□□□□□ -0.4
CKAP4-201ENST00000378026 CLUHP3Q96NS8 147 aa12.56□□□□□ -0.4
CKAP4-201ENST00000378026 RASL11BQ9BPW5 248 aa12.56□□□□□ -0.4
CKAP4-201ENST00000378026 TWIST1Q15672 202 aa12.55□□□□□ -0.4
CKAP4-201ENST00000378026 MRGPRG-AS1Q2M3A8 158 aa12.55□□□□□ -0.4
CKAP4-201ENST00000378026 C22orf34Q6ZV56 151 aa12.55□□□□□ -0.4
CKAP4-201ENST00000378026 ARRDC1-AS1Q9H2J1 176 aa12.55□□□□□ -0.4
CKAP4-201ENST00000378026 TMEM189A5PLL7 270 aa12.55□□□□□ -0.4
CKAP4-201ENST00000378026 PRSS1P07477 247 aa12.55□□□□□ -0.4
CKAP4-201ENST00000378026 SH2D6Q7Z4S9 175 aa12.55□□□□□ -0.4
CKAP4-201ENST00000378026 GTSCR1Q86UQ5 136 aa12.55□□□□□ -0.4
CKAP4-201ENST00000378026 K7EQM0 130 aa12.54□□□□□ -0.4
CKAP4-201ENST00000378026 IGHG3P01860 377 aa12.54□□□□□ -0.4
CKAP4-201ENST00000378026 LYPD2Q6UXB3 125 aa12.54□□□□□ -0.4
CKAP4-201ENST00000378026 NGBQ9NPG2 151 aa12.54□□□□□ -0.4
CKAP4-201ENST00000378026 DKK4Q9UBT3 224 aa12.54□□□□□ -0.4
CKAP4-201ENST00000378026 ADGRG4Q8IZF6 3080 aa12.54□□□□□ -0.4
CKAP4-201ENST00000378026 TRBV19A0A075B6N1 114 aa12.54□□□□□ -0.4
CKAP4-201ENST00000378026 SIVA1O15304 175 aa12.54□□□□□ -0.4
CKAP4-201ENST00000378026 GAS8-AS1O95177 125 aa12.54□□□□□ -0.4
CKAP4-201ENST00000378026 GATA4P43694 442 aa12.54□□□□□ -0.4
CKAP4-201ENST00000378026 ZNF474Q6S9Z5 364 aaPredicted RBP12.54□□□□□ -0.4
CKAP4-201ENST00000378026 CCL17Q92583 94 aa12.54□□□□□ -0.4
CKAP4-201ENST00000378026 CHAC1Q9BUX1 264 aa12.53□□□□□ -0.4
CKAP4-201ENST00000378026 MGAQ8IWI9 3026 aa12.53□□□□□ -0.4
CKAP4-201ENST00000378026 IGLV3-9A0A075B6K5 115 aa12.53□□□□□ -0.4
CKAP4-201ENST00000378026 SMIM17P0DL12 118 aa12.53□□□□□ -0.4
CKAP4-201ENST00000378026 AMTNQ6UX39 209 aa12.53□□□□□ -0.4
CKAP4-201ENST00000378026 VGLL1Q99990 258 aa12.53□□□□□ -0.4
CKAP4-201ENST00000378026 PCNX1Q96RV3 2341 aa12.53□□□□□ -0.4
CKAP4-201ENST00000378026 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.53□□□□□ -0.4
CKAP4-201ENST00000378026 EVI2AP22794 236 aa12.53□□□□□ -0.4
CKAP4-201ENST00000378026 TNFRSF14Q92956 283 aa12.53□□□□□ -0.4
CKAP4-201ENST00000378026 SIGLEC15Q6ZMC9 328 aa12.52□□□□□ -0.4
CKAP4-201ENST00000378026 MSRB1Q9NZV6 116 aa12.52□□□□□ -0.4
CKAP4-201ENST00000378026 GAGE12HA6NDE8 117 aa12.52□□□□□ -0.41
CKAP4-201ENST00000378026 H3BMG7 143 aa12.52□□□□□ -0.41
CKAP4-201ENST00000378026 FCER1GP30273 86 aa12.52□□□□□ -0.41
CKAP4-201ENST00000378026 ETDBQ3ZM63 59 aa12.52□□□□□ -0.41
CKAP4-201ENST00000378026 SEM1Q6ZVN7 128 aa12.52□□□□□ -0.41
CKAP4-201ENST00000378026 TMEM75Q8N9X5 138 aa12.52□□□□□ -0.41
CKAP4-201ENST00000378026 ARPC1AQ92747 370 aa12.52□□□□□ -0.41
CKAP4-201ENST00000378026 A0A1B0GW15 77 aa12.51□□□□□ -0.41
CKAP4-201ENST00000378026 SH2D1AO60880 128 aa12.51□□□□□ -0.41
CKAP4-201ENST00000378026 LEPP41159 167 aa12.51□□□□□ -0.41
CKAP4-201ENST00000378026 WFDC12Q8WWY7 111 aa12.51□□□□□ -0.41
CKAP4-201ENST00000378026 SCNM1Q9BWG6 230 aa12.51□□□□□ -0.41
CKAP4-201ENST00000378026 FBXL15Q9H469 300 aa12.51□□□□□ -0.41
CKAP4-201ENST00000378026 MALRD1Q5VYJ5 2156 aa12.51□□□□□ -0.41
CKAP4-201ENST00000378026 COL27A1Q8IZC6 1860 aaPredicted RBP12.51□□□□□ -0.41
CKAP4-201ENST00000378026 HOXB4P17483 251 aaPredicted RBP12.51□□□□□ -0.41
CKAP4-201ENST00000378026 ZNF493Q6ZR52 646 aa12.51□□□□□ -0.41
CKAP4-201ENST00000378026 TECTAO75443 2155 aa12.51□□□□□ -0.41
CKAP4-201ENST00000378026 IGKV2-40A0A087WW87 121 aaPredicted RBP12.51□□□□□ -0.41
CKAP4-201ENST00000378026 WI2-2373I1.2A0A1W2PRP0 233 aa12.51□□□□□ -0.41
CKAP4-201ENST00000378026 IGKV2D-40P01614 121 aaPredicted RBP12.51□□□□□ -0.41
CKAP4-201ENST00000378026 IL4P05112 153 aa12.51□□□□□ -0.41
CKAP4-201ENST00000378026 FAM27E3Q08E93 113 aa12.51□□□□□ -0.41
CKAP4-201ENST00000378026 PLGLAQ15195 96 aa12.51□□□□□ -0.41
CKAP4-201ENST00000378026 Q8TAT8 98 aa12.51□□□□□ -0.41
CKAP4-201ENST00000378026 TMEM30BQ3MIR4 351 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms