RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 TMEM183AQ8IXX5 376 aa6.7□□□□□ -1.34
CRNKL1-202ENST00000377340 GPR82Q96P67 336 aa6.7□□□□□ -1.34
CRNKL1-202ENST00000377340 TSSC4Q9Y5U2 329 aaPredicted RBP6.7□□□□□ -1.34
CRNKL1-202ENST00000377340 B4DEV8 164 aa6.7□□□□□ -1.34
CRNKL1-202ENST00000377340 TNRC18O15417 2968 aaPredicted RBP6.7□□□□□ -1.34
CRNKL1-202ENST00000377340 ZNF705AQ6ZN79 300 aaPredicted RBP6.7□□□□□ -1.34
CRNKL1-202ENST00000377340 Q8N9W7 124 aa6.7□□□□□ -1.34
CRNKL1-202ENST00000377340 TMEM158Q8WZ71 300 aa6.7□□□□□ -1.34
CRNKL1-202ENST00000377340 PTPRBP23467 1997 aa6.7□□□□□ -1.34
CRNKL1-202ENST00000377340 BAHCC1Q9P281 2608 aa6.7□□□□□ -1.34
CRNKL1-202ENST00000377340 COL4A2P08572 1712 aa6.7□□□□□ -1.34
CRNKL1-202ENST00000377340 ASIPP42127 132 aa6.7□□□□□ -1.34
CRNKL1-202ENST00000377340 CCL20P78556 96 aa6.7□□□□□ -1.34
CRNKL1-202ENST00000377340 OR5AL1P0C617 328 aa6.69□□□□□ -1.34
CRNKL1-202ENST00000377340 DEFB130BP0DP73 79 aa6.69□□□□□ -1.34
CRNKL1-202ENST00000377340 DEFB130AP0DP74 79 aa6.69□□□□□ -1.34
CRNKL1-202ENST00000377340 LYPD6Q86Y78 171 aa6.69□□□□□ -1.34
CRNKL1-202ENST00000377340 RNF182Q8N6D2 247 aa6.69□□□□□ -1.34
CRNKL1-202ENST00000377340 ANAPC16Q96DE5 110 aa6.69□□□□□ -1.34
CRNKL1-202ENST00000377340 ISLRO14498 428 aa6.69□□□□□ -1.34
CRNKL1-202ENST00000377340 IGHV3-53P01767 116 aa6.69□□□□□ -1.34
CRNKL1-202ENST00000377340 CRISP2P16562 243 aa6.69□□□□□ -1.34
CRNKL1-202ENST00000377340 SNRPEP62304 92 aaKnown RBP6.69□□□□□ -1.34
CRNKL1-202ENST00000377340 DYNAPQ8N1N2 210 aa6.69□□□□□ -1.34
CRNKL1-202ENST00000377340 CITED2Q99967 270 aaPredicted RBP6.69□□□□□ -1.34
CRNKL1-202ENST00000377340 EPDR1Q9UM22 224 aa6.69□□□□□ -1.34
CRNKL1-202ENST00000377340 PSG8Q9UQ74 426 aa6.69□□□□□ -1.34
CRNKL1-202ENST00000377340 ARL2-SNX15V9GYD0 113 aa6.69□□□□□ -1.34
CRNKL1-202ENST00000377340 PHOX2AO14813 284 aa6.69□□□□□ -1.34
CRNKL1-202ENST00000377340 VN1R17PQ8TDU5 208 aa6.69□□□□□ -1.34
CRNKL1-202ENST00000377340 DPH3Q96FX2 82 aa6.69□□□□□ -1.34
CRNKL1-202ENST00000377340 FOXC2Q99958 501 aa6.69□□□□□ -1.34
CRNKL1-202ENST00000377340 NRN1Q9NPD7 142 aa6.69□□□□□ -1.34
CRNKL1-202ENST00000377340 OTORQ9NRC9 128 aa6.69□□□□□ -1.34
CRNKL1-202ENST00000377340 ZNF586Q9NXT0 402 aa6.69□□□□□ -1.34
CRNKL1-202ENST00000377340 LINC01548A6NM66 108 aa6.68□□□□□ -1.34
CRNKL1-202ENST00000377340 FABP5P3A8MUU1 101 aa6.68□□□□□ -1.34
CRNKL1-202ENST00000377340 AMTP48728 403 aa6.68□□□□□ -1.34
CRNKL1-202ENST00000377340 SAMD13Q5VXD3 122 aa6.68□□□□□ -1.34
CRNKL1-202ENST00000377340 DEFB104AQ8WTQ1 72 aa6.68□□□□□ -1.34
CRNKL1-202ENST00000377340 SEC11CQ9BY50 192 aa6.68□□□□□ -1.34
CRNKL1-202ENST00000377340 A0A087X0M5 115 aa6.68□□□□□ -1.34
CRNKL1-202ENST00000377340 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.68□□□□□ -1.34
CRNKL1-202ENST00000377340 A0A1B0GX30 115 aa6.68□□□□□ -1.34
CRNKL1-202ENST00000377340 CD5LO43866 347 aa6.68□□□□□ -1.34
CRNKL1-202ENST00000377340 BTF3P20290 206 aaKnown RBP6.68□□□□□ -1.34
CRNKL1-202ENST00000377340 ZNF343Q6P1L6 599 aa6.68□□□□□ -1.34
CRNKL1-202ENST00000377340 TRGV4A0A0C4DH28 118 aa6.68□□□□□ -1.34
CRNKL1-202ENST00000377340 CLPSL1A2RUU4 121 aa6.68□□□□□ -1.34
CRNKL1-202ENST00000377340 FOLR2P14207 255 aa6.68□□□□□ -1.34
CRNKL1-202ENST00000377340 WDR73Q6P4I2 378 aa6.68□□□□□ -1.34
CRNKL1-202ENST00000377340 DSCAML1Q8TD84 2053 aa6.68□□□□□ -1.34
CRNKL1-202ENST00000377340 IGLC7A0M8Q6 106 aa6.68□□□□□ -1.34
CRNKL1-202ENST00000377340 UBE2L6O14933 153 aa6.68□□□□□ -1.34
CRNKL1-202ENST00000377340 TOMM40O96008 361 aa6.68□□□□□ -1.34
CRNKL1-202ENST00000377340 FOXA3P55318 350 aaPredicted RBP6.68□□□□□ -1.34
CRNKL1-202ENST00000377340 LCN12Q6JVE5 192 aa6.68□□□□□ -1.34
CRNKL1-202ENST00000377340 C5orf56Q8N8D9 126 aa6.68□□□□□ -1.34
CRNKL1-202ENST00000377340 SRSF8Q9BRL6 282 aaKnown RBP6.68□□□□□ -1.34
CRNKL1-202ENST00000377340 ATG101Q9BSB4 218 aa6.68□□□□□ -1.34
CRNKL1-202ENST00000377340 FNDC4Q9H6D8 234 aaPredicted RBP6.68□□□□□ -1.34
CRNKL1-202ENST00000377340 STAG3L3P0CL85 134 aa6.67□□□□□ -1.34
CRNKL1-202ENST00000377340 SPINK13Q1W4C9 94 aa6.67□□□□□ -1.34
CRNKL1-202ENST00000377340 RNASE7Q9H1E1 156 aaKnown RBP6.67□□□□□ -1.34
CRNKL1-202ENST00000377340 SDF2L1Q9HCN8 221 aa6.67□□□□□ -1.34
CRNKL1-202ENST00000377340 IGSF10Q6WRI0 2623 aa6.67□□□□□ -1.34
CRNKL1-202ENST00000377340 IGHV3-73A0A0B4J1V6 119 aa6.67□□□□□ -1.34
CRNKL1-202ENST00000377340 FAM74A7A6NL05 159 aa6.67□□□□□ -1.34
CRNKL1-202ENST00000377340 APCSP02743 223 aa6.67□□□□□ -1.34
CRNKL1-202ENST00000377340 TCTAP57738 103 aa6.67□□□□□ -1.34
CRNKL1-202ENST00000377340 PRR31Q5SQ13 230 aa6.67□□□□□ -1.34
CRNKL1-202ENST00000377340 TMEM250H0YL14 139 aa6.67□□□□□ -1.34
CRNKL1-202ENST00000377340 TNFRSF13BO14836 293 aaPredicted RBP6.67□□□□□ -1.34
CRNKL1-202ENST00000377340 PTTG1IPP53801 180 aa6.67□□□□□ -1.34
CRNKL1-202ENST00000377340 C9orf139Q6ZV77 190 aa6.67□□□□□ -1.34
CRNKL1-202ENST00000377340 ANAPC10Q9UM13 185 aa6.67□□□□□ -1.34
CRNKL1-202ENST00000377340 REV3LO60673 3130 aa6.67□□□□□ -1.34
CRNKL1-202ENST00000377340 TRBV20OR9-2A0A075B6H5 130 aa6.66□□□□□ -1.34
CRNKL1-202ENST00000377340 TRGV1A0A0A0MS02 117 aa6.66□□□□□ -1.34
CRNKL1-202ENST00000377340 KNCNA6PVL3 124 aa6.66□□□□□ -1.34
CRNKL1-202ENST00000377340 NPIPB6E9PJ23 425 aa6.66□□□□□ -1.34
CRNKL1-202ENST00000377340 TRGC1P0CF51 173 aa6.66□□□□□ -1.34
CRNKL1-202ENST00000377340 DMRTA1Q5VZB9 504 aa6.66□□□□□ -1.34
CRNKL1-202ENST00000377340 STAB1Q9NY15 2570 aa6.66□□□□□ -1.34
CRNKL1-202ENST00000377340 TRAV21A0A0B4J279 112 aa6.66□□□□□ -1.34
CRNKL1-202ENST00000377340 A0A1W2PRE2 83 aa6.66□□□□□ -1.34
CRNKL1-202ENST00000377340 CA1P00915 261 aaPredicted RBP6.66□□□□□ -1.34
CRNKL1-202ENST00000377340 AVPP01185 164 aa6.66□□□□□ -1.34
CRNKL1-202ENST00000377340 ERCC8Q13216 396 aa6.66□□□□□ -1.34
CRNKL1-202ENST00000377340 FAM162BQ5T6X4 162 aa6.66□□□□□ -1.34
CRNKL1-202ENST00000377340 TCF23Q7RTU1 214 aa6.66□□□□□ -1.34
CRNKL1-202ENST00000377340 C8orf31Q8N9H6 132 aa6.66□□□□□ -1.34
CRNKL1-202ENST00000377340 AJUBAQ96IF1 538 aa6.66□□□□□ -1.34
CRNKL1-202ENST00000377340 GSN-AS1Q9NRJ2 163 aa6.66□□□□□ -1.34
CRNKL1-202ENST00000377340 A0A1B0GUS0 222 aa6.66□□□□□ -1.34
CRNKL1-202ENST00000377340 LINC00862A6NCI5 91 aa6.66□□□□□ -1.34
CRNKL1-202ENST00000377340 CD5P06127 495 aa6.66□□□□□ -1.34
CRNKL1-202ENST00000377340 STAG3L2P0CL84 134 aa6.66□□□□□ -1.34
CRNKL1-202ENST00000377340 RPS20P60866 119 aaKnown RBP6.66□□□□□ -1.34
CRNKL1-202ENST00000377340 LINC00479Q96M42 142 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms