RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 SRSF2Q01130 221 aaKnown RBP9.58□□□□□ -0.88
VPS13A-205ENST00000376636 TFF2Q03403 129 aa9.58□□□□□ -0.88
VPS13A-205ENST00000376636 SPATA31B1PQ5VZV4 182 aa9.58□□□□□ -0.88
VPS13A-205ENST00000376636 MRPS18CQ9Y3D5 142 aaKnown RBP9.58□□□□□ -0.88
VPS13A-205ENST00000376636 MED13Q9UHV7 2174 aa9.58□□□□□ -0.88
VPS13A-205ENST00000376636 BAALCQ8WXS3 180 aa9.58□□□□□ -0.88
VPS13A-205ENST00000376636 TMEM75Q8N9X5 138 aa9.58□□□□□ -0.88
VPS13A-205ENST00000376636 PRO1854Q9UHT4 67 aa9.58□□□□□ -0.88
VPS13A-205ENST00000376636 CHCHD2Q9Y6H1 151 aaPredicted RBP9.58□□□□□ -0.88
VPS13A-205ENST00000376636 A0A1B0GWJ7 208 aa9.58□□□□□ -0.88
VPS13A-205ENST00000376636 FAM231BA6NCW3 169 aa9.58□□□□□ -0.88
VPS13A-205ENST00000376636 LCNL1Q6ZST4 164 aa9.58□□□□□ -0.88
VPS13A-205ENST00000376636 STPG4Q8N801 248 aa9.58□□□□□ -0.88
VPS13A-205ENST00000376636 PLXNB3Q9ULL4 1909 aa9.58□□□□□ -0.88
VPS13A-205ENST00000376636 LCN12Q6JVE5 192 aa9.58□□□□□ -0.88
VPS13A-205ENST00000376636 DSCAML1Q8TD84 2053 aa9.58□□□□□ -0.88
VPS13A-205ENST00000376636 SCRT2Q9NQ03 307 aa9.57□□□□□ -0.88
VPS13A-205ENST00000376636 MP68P56378 58 aa9.57□□□□□ -0.88
VPS13A-205ENST00000376636 BVES-AS1Q5T3Y7 98 aa9.57□□□□□ -0.88
VPS13A-205ENST00000376636 TRAV40A0A0B4J280 105 aa9.57□□□□□ -0.88
VPS13A-205ENST00000376636 MORN5Q5VZ52 161 aa9.57□□□□□ -0.88
VPS13A-205ENST00000376636 MRPL14Q6P1L8 145 aaKnown RBP9.57□□□□□ -0.88
VPS13A-205ENST00000376636 RNF166Q96A37 237 aaPredicted RBP9.57□□□□□ -0.88
VPS13A-205ENST00000376636 CARD19Q96LW7 228 aa9.57□□□□□ -0.88
VPS13A-205ENST00000376636 TIMM23O14925 209 aa9.57□□□□□ -0.88
VPS13A-205ENST00000376636 A8MWP6 167 aa9.57□□□□□ -0.88
VPS13A-205ENST00000376636 J3KT08 172 aa9.57□□□□□ -0.88
VPS13A-205ENST00000376636 KLF5Q13887 457 aaPredicted RBP9.57□□□□□ -0.88
VPS13A-205ENST00000376636 MINOS1Q5TGZ0 78 aa9.57□□□□□ -0.88
VPS13A-205ENST00000376636 RNF5Q99942 180 aa9.57□□□□□ -0.88
VPS13A-205ENST00000376636 MINOS1-NBL1R4GNA1 71 aa9.57□□□□□ -0.88
VPS13A-205ENST00000376636 K7EP34 96 aa9.57□□□□□ -0.88
VPS13A-205ENST00000376636 WFDC9Q8NEX5 89 aa9.57□□□□□ -0.88
VPS13A-205ENST00000376636 SPSB2Q99619 263 aa9.57□□□□□ -0.88
VPS13A-205ENST00000376636 SELENOKQ9Y6D0 94 aa9.57□□□□□ -0.88
VPS13A-205ENST00000376636 TP53TG1Q9Y2A0 90 aa9.57□□□□□ -0.88
VPS13A-205ENST00000376636 ANAPC1Q9H1A4 1944 aa9.57□□□□□ -0.88
VPS13A-205ENST00000376636 F6UB75 175 aa9.57□□□□□ -0.88
VPS13A-205ENST00000376636 ZNF362Q5T0B9 420 aaPredicted RBP9.57□□□□□ -0.88
VPS13A-205ENST00000376636 OOSP1A8MZH6 123 aa9.56□□□□□ -0.88
VPS13A-205ENST00000376636 WFDC12Q8WWY7 111 aa9.56□□□□□ -0.88
VPS13A-205ENST00000376636 WDR83OSQ9Y284 106 aa9.56□□□□□ -0.88
VPS13A-205ENST00000376636 A0A1W2PPM0 123 aa9.56□□□□□ -0.88
VPS13A-205ENST00000376636 AZU1P20160 251 aa9.56□□□□□ -0.88
VPS13A-205ENST00000376636 RNASE6Q93091 150 aaKnown RBP9.56□□□□□ -0.88
VPS13A-205ENST00000376636 ID3Q02535 119 aa9.56□□□□□ -0.88
VPS13A-205ENST00000376636 A0A1W2PR77 199 aa9.56□□□□□ -0.88
VPS13A-205ENST00000376636 SYNJ2BPP57105 145 aa9.56□□□□□ -0.88
VPS13A-205ENST00000376636 DAZ1Q9NQZ3 744 aaKnown RBP9.56□□□□□ -0.88
VPS13A-205ENST00000376636 FRMPD3Q5JV73 1810 aa9.56□□□□□ -0.88
VPS13A-205ENST00000376636 FNDC10F2Z333 226 aa9.56□□□□□ -0.88
VPS13A-205ENST00000376636 RNF114Q9Y508 228 aa9.56□□□□□ -0.88
VPS13A-205ENST00000376636 R3HDMLQ9H3Y0 253 aa9.55□□□□□ -0.88
VPS13A-205ENST00000376636 NCOA6Q14686 2063 aaPredicted RBP9.55□□□□□ -0.88
VPS13A-205ENST00000376636 VWA8A3KMH1 1905 aa9.55□□□□□ -0.88
VPS13A-205ENST00000376636 CRYBA4P53673 196 aa9.55□□□□□ -0.88
VPS13A-205ENST00000376636 TCF20Q9UGU0 1960 aaKnown RBP9.55□□□□□ -0.88
VPS13A-205ENST00000376636 CEND1Q8N111 149 aa9.55□□□□□ -0.88
VPS13A-205ENST00000376636 SAP25Q8TEE9 199 aa9.55□□□□□ -0.88
VPS13A-205ENST00000376636 THBDP07204 575 aa9.55□□□□□ -0.88
VPS13A-205ENST00000376636 TMEM256Q8N2U0 113 aa9.55□□□□□ -0.88
VPS13A-205ENST00000376636 SRSF8Q9BRL6 282 aaKnown RBP9.55□□□□□ -0.88
VPS13A-205ENST00000376636 KIAA1549Q9HCM3 1950 aa9.55□□□□□ -0.88
VPS13A-205ENST00000376636 C22orf46C9J442 243 aa9.55□□□□□ -0.88
VPS13A-205ENST00000376636 GLI3P10071 1580 aa9.55□□□□□ -0.88
VPS13A-205ENST00000376636 IGHV2-26A0A0B4J1V2 119 aa9.55□□□□□ -0.88
VPS13A-205ENST00000376636 CFPP27918 469 aa9.55□□□□□ -0.88
VPS13A-205ENST00000376636 RPL35AP18077 110 aaKnown RBP9.55□□□□□ -0.88
VPS13A-205ENST00000376636 FXYD7P58549 80 aa9.55□□□□□ -0.88
VPS13A-205ENST00000376636 KNCNA6PVL3 124 aa9.55□□□□□ -0.88
VPS13A-205ENST00000376636 IGKV1D-13A0A0B4J2D9 117 aa9.54□□□□□ -0.88
VPS13A-205ENST00000376636 CTSBP07858 339 aa9.54□□□□□ -0.88
VPS13A-205ENST00000376636 IGKV1-13P0DP09 117 aa9.54□□□□□ -0.88
VPS13A-205ENST00000376636 FAM27E3Q08E93 113 aa9.54□□□□□ -0.88
VPS13A-205ENST00000376636 CGB3P0DN86 165 aa9.54□□□□□ -0.88
VPS13A-205ENST00000376636 IGHV1-2P23083 117 aa9.54□□□□□ -0.88
VPS13A-205ENST00000376636 PFN2P35080 140 aa9.54□□□□□ -0.88
VPS13A-205ENST00000376636 TAL2Q16559 108 aa9.54□□□□□ -0.88
VPS13A-205ENST00000376636 AMN1Q8IY45 258 aa9.54□□□□□ -0.88
VPS13A-205ENST00000376636 TMEM243Q9BU79 118 aa9.54□□□□□ -0.88
VPS13A-205ENST00000376636 KLHDC3Q9BQ90 382 aa9.54□□□□□ -0.88
VPS13A-205ENST00000376636 SMIM2Q9BVW6 85 aa9.54□□□□□ -0.88
VPS13A-205ENST00000376636 ORMDL1Q9P0S3 153 aa9.54□□□□□ -0.88
VPS13A-205ENST00000376636 A0A087WWL8 130 aa9.54□□□□□ -0.88
VPS13A-205ENST00000376636 IGHV3-53P01767 116 aa9.54□□□□□ -0.88
VPS13A-205ENST00000376636 CCL3L1P16619 93 aa9.54□□□□□ -0.88
VPS13A-205ENST00000376636 IGLV3-21P80748 117 aaPredicted RBP9.54□□□□□ -0.88
VPS13A-205ENST00000376636 C20orf144Q9BQM9 153 aa9.54□□□□□ -0.88
VPS13A-205ENST00000376636 PRB3Q04118 309 aaPredicted RBP9.54□□□□□ -0.88
VPS13A-205ENST00000376636 LINC01545Q5VT33 79 aa9.54□□□□□ -0.88
VPS13A-205ENST00000376636 CGB7P0DN87 165 aa9.54□□□□□ -0.88
VPS13A-205ENST00000376636 LY6G6FQ5SQ64 297 aa9.54□□□□□ -0.88
VPS13A-205ENST00000376636 SMIM20Q8N5G0 67 aa9.54□□□□□ -0.88
VPS13A-205ENST00000376636 SIPA1L1O43166 1804 aa9.54□□□□□ -0.88
VPS13A-205ENST00000376636 GAS1P54826 345 aa9.54□□□□□ -0.88
VPS13A-205ENST00000376636 ZNF664Q8N3J9 261 aa9.54□□□□□ -0.88
VPS13A-205ENST00000376636 C8orf31Q8N9H6 132 aa9.54□□□□□ -0.88
VPS13A-205ENST00000376636 Q0VG73 95 aa9.54□□□□□ -0.88
VPS13A-205ENST00000376636 SLC25A45Q8N413 288 aa9.54□□□□□ -0.88
VPS13A-205ENST00000376636 HERVK_113P63121 156 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms