RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 PRM2P04554 102 aa16.26■□□□□ 0.19
C9orf47-202ENST00000375850 S100A5P33763 92 aa16.26■□□□□ 0.19
C9orf47-202ENST00000375850 CDKN1BP46527 198 aa16.26■□□□□ 0.19
C9orf47-202ENST00000375850 OR10J6PQ8NGY7 276 aa16.26■□□□□ 0.19
C9orf47-202ENST00000375850 SMIM8Q96KF7 97 aa16.26■□□□□ 0.19
C9orf47-202ENST00000375850 H7BYZ3 331 aa16.25■□□□□ 0.19
C9orf47-202ENST00000375850 ADAP1O75689 374 aa16.25■□□□□ 0.19
C9orf47-202ENST00000375850 POLR2GP62487 172 aaKnown RBP eCLIP16.25■□□□□ 0.19
C9orf47-202ENST00000375850 TNP2Q05952 138 aa16.25■□□□□ 0.19
C9orf47-202ENST00000375850 CLINT1Q14677 625 aa16.25■□□□□ 0.19
C9orf47-202ENST00000375850 LCN15Q6UWW0 184 aa16.25■□□□□ 0.19
C9orf47-202ENST00000375850 TMEM263Q8WUH6 116 aaKnown RBP16.25■□□□□ 0.19
C9orf47-202ENST00000375850 C9orf170A2RU37 121 aa16.24■□□□□ 0.19
C9orf47-202ENST00000375850 PMS2P5A8MQ11 134 aa16.24■□□□□ 0.19
C9orf47-202ENST00000375850 RPUSD4Q96CM3 377 aaKnown RBP16.24■□□□□ 0.19
C9orf47-202ENST00000375850 UHRF2Q96PU4 802 aa16.24■□□□□ 0.19
C9orf47-202ENST00000375850 SLC50A1Q9BRV3 221 aa16.24■□□□□ 0.19
C9orf47-202ENST00000375850 MGAT4CQ9UBM8 478 aa16.24■□□□□ 0.19
C9orf47-202ENST00000375850 ANXA7P20073 488 aaKnown RBP16.23■□□□□ 0.19
C9orf47-202ENST00000375850 FCN2Q15485 313 aa16.23■□□□□ 0.19
C9orf47-202ENST00000375850 TTC32Q5I0X7 151 aa16.23■□□□□ 0.19
C9orf47-202ENST00000375850 TEPPQ6URK8 271 aa16.23■□□□□ 0.19
C9orf47-202ENST00000375850 OR10P1Q8NGE3 313 aa16.23■□□□□ 0.19
C9orf47-202ENST00000375850 RNASE8Q8TDE3 154 aaKnown RBP16.23■□□□□ 0.19
C9orf47-202ENST00000375850 RNF141Q8WVD5 230 aa16.23■□□□□ 0.19
C9orf47-202ENST00000375850 ZNF503Q96F45 646 aa16.23■□□□□ 0.19
C9orf47-202ENST00000375850 ARL6Q9H0F7 186 aa16.23■□□□□ 0.19
C9orf47-202ENST00000375850 ARV1Q9H2C2 271 aa16.23■□□□□ 0.19
C9orf47-202ENST00000375850 LINC00588Q9Y4M8 146 aa16.23■□□□□ 0.19
C9orf47-202ENST00000375850 NAP1L6A6NFF2 107 aa16.22■□□□□ 0.19
C9orf47-202ENST00000375850 SSSCA1O60232 199 aa16.22■□□□□ 0.19
C9orf47-202ENST00000375850 HTN1P15515 57 aa16.22■□□□□ 0.19
C9orf47-202ENST00000375850 TAS2R30P59541 319 aa16.22■□□□□ 0.19
C9orf47-202ENST00000375850 C4orf46Q504U0 113 aa16.22■□□□□ 0.19
C9orf47-202ENST00000375850 TMEM14EPQ6UXP3 125 aa16.22■□□□□ 0.19
C9orf47-202ENST00000375850 ZNF546Q86UE3 836 aa16.22■□□□□ 0.19
C9orf47-202ENST00000375850 CCDC190Q86UF4 302 aa16.21■□□□□ 0.19
C9orf47-202ENST00000375850 CCDC28AQ8IWP9 274 aa16.21■□□□□ 0.19
C9orf47-202ENST00000375850 GGACTQ9BVM4 153 aa16.21■□□□□ 0.19
C9orf47-202ENST00000375850 NOP10Q9NPE3 64 aaKnown RBP16.21■□□□□ 0.19
C9orf47-202ENST00000375850 ZNF331Q9NQX6 463 aaPredicted RBP16.21■□□□□ 0.19
C9orf47-202ENST00000375850 MRPS12O15235 138 aaKnown RBP16.2■□□□□ 0.18
C9orf47-202ENST00000375850 TSC22D2O75157 780 aa16.2■□□□□ 0.18
C9orf47-202ENST00000375850 RRAS2P62070 204 aaPredicted RBP16.2■□□□□ 0.18
C9orf47-202ENST00000375850 SSX7Q7RTT5 188 aa16.2■□□□□ 0.18
C9orf47-202ENST00000375850 BPIFA4PQ86YQ2 179 aa16.2■□□□□ 0.18
C9orf47-202ENST00000375850 GOSR2O14653 212 aa16.19■□□□□ 0.18
C9orf47-202ENST00000375850 NDUFB6O95139 128 aa16.19■□□□□ 0.18
C9orf47-202ENST00000375850 BTF3P20290 206 aaKnown RBP16.19■□□□□ 0.18
C9orf47-202ENST00000375850 PATE2Q6UY27 113 aa16.19■□□□□ 0.18
C9orf47-202ENST00000375850 GNPNAT1Q96EK6 184 aaPredicted RBP16.19■□□□□ 0.18
C9orf47-202ENST00000375850 Q9H8V8 135 aa16.19■□□□□ 0.18
C9orf47-202ENST00000375850 METTL15P1P0C7V9 234 aa16.18■□□□□ 0.18
C9orf47-202ENST00000375850 M6PRP20645 277 aa16.18■□□□□ 0.18
C9orf47-202ENST00000375850 INPP1P49441 399 aa16.18■□□□□ 0.18
C9orf47-202ENST00000375850 SPANXN2Q5MJ10 180 aa16.18■□□□□ 0.18
C9orf47-202ENST00000375850 LINC00305Q7Z4B0 112 aa16.18■□□□□ 0.18
C9orf47-202ENST00000375850 LINC00612Q8N6U2 182 aa16.18■□□□□ 0.18
C9orf47-202ENST00000375850 KRTAP4-5Q9BYR2 181 aa16.18■□□□□ 0.18
C9orf47-202ENST00000375850 H3BNG1 76 aa16.17■□□□□ 0.18
C9orf47-202ENST00000375850 SLC38A11Q08AI6 406 aa16.17■□□□□ 0.18
C9orf47-202ENST00000375850 RXFP4Q8TDU9 374 aa16.17■□□□□ 0.18
C9orf47-202ENST00000375850 PXMP4Q9Y6I8 212 aa16.17■□□□□ 0.18
C9orf47-202ENST00000375850 A0A1W2PPQ1 181 aa16.16■□□□□ 0.18
C9orf47-202ENST00000375850 OR4E1P0C645 316 aa16.16■□□□□ 0.18
C9orf47-202ENST00000375850 OR5I1Q13606 314 aa16.16■□□□□ 0.18
C9orf47-202ENST00000375850 UPK3BQ9BT76 320 aa16.16■□□□□ 0.18
C9orf47-202ENST00000375850 ABCA13Q86UQ4 5058 aa16.15■□□□□ 0.18
C9orf47-202ENST00000375850 AGPAT2O15120 278 aa16.15■□□□□ 0.18
C9orf47-202ENST00000375850 COX7A2P2O60397 106 aa16.15■□□□□ 0.18
C9orf47-202ENST00000375850 CCNKO75909 580 aa16.15■□□□□ 0.18
C9orf47-202ENST00000375850 RLN2P04090 185 aa16.15■□□□□ 0.18
C9orf47-202ENST00000375850 IAH1Q2TAA2 248 aaPredicted RBP16.15■□□□□ 0.18
C9orf47-202ENST00000375850 TRIQKQ629K1 86 aa16.15■□□□□ 0.18
C9orf47-202ENST00000375850 MAPKAPK5-AS1Q8N8E1 139 aa16.15■□□□□ 0.18
C9orf47-202ENST00000375850 ODF3Q96PU9 254 aa16.15■□□□□ 0.18
C9orf47-202ENST00000375850 TRAV26-1A0A087WT03 109 aa16.14■□□□□ 0.17
C9orf47-202ENST00000375850 SNURFLB1AK76 121 aa16.14■□□□□ 0.17
C9orf47-202ENST00000375850 CNPY1Q3B7I2 92 aa16.14■□□□□ 0.17
C9orf47-202ENST00000375850 SRRQ9GZT4 340 aa16.14■□□□□ 0.17
C9orf47-202ENST00000375850 Q9H3A6 140 aa16.14■□□□□ 0.17
C9orf47-202ENST00000375850 HSPG2P98160 4391 aa16.13■□□□□ 0.17
C9orf47-202ENST00000375850 SCGB1D2O95969 90 aa16.13■□□□□ 0.17
C9orf47-202ENST00000375850 GUK1Q16774 197 aa16.13■□□□□ 0.17
C9orf47-202ENST00000375850 GFI1BQ5VTD9 330 aa16.13■□□□□ 0.17
C9orf47-202ENST00000375850 CENPXA8MT69 81 aa16.12■□□□□ 0.17
C9orf47-202ENST00000375850 ZNF701M0R085 212 aaPredicted RBP16.12■□□□□ 0.17
C9orf47-202ENST00000375850 LEPP41159 167 aa16.12■□□□□ 0.17
C9orf47-202ENST00000375850 RAB31Q13636 194 aa16.12■□□□□ 0.17
C9orf47-202ENST00000375850 C10orf113Q5VZT2 155 aa16.12■□□□□ 0.17
C9orf47-202ENST00000375850 ZBTB8BQ8NAP8 495 aaPredicted RBP16.12■□□□□ 0.17
C9orf47-202ENST00000375850 PYGO2Q9BRQ0 406 aa16.12■□□□□ 0.17
C9orf47-202ENST00000375850 CCDC160A6NGH7 325 aa16.11■□□□□ 0.17
C9orf47-202ENST00000375850 IGLC2P0DOY2 106 aa16.11■□□□□ 0.17
C9orf47-202ENST00000375850 Q6ZRG5 221 aa16.11■□□□□ 0.17
C9orf47-202ENST00000375850 FLVCR2Q9UPI3 526 aa16.11■□□□□ 0.17
C9orf47-202ENST00000375850 RCL1Q9Y2P8 373 aaKnown RBP16.11■□□□□ 0.17
C9orf47-202ENST00000375850 DAZ2Q13117 558 aaKnown RBP16.1■□□□□ 0.17
C9orf47-202ENST00000375850 SPATA12Q7Z6I5 190 aa16.1■□□□□ 0.17
C9orf47-202ENST00000375850 MITD1Q8WV92 249 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms