RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 ZNF260Q3ZCT1 412 aa7.05□□□□□ -1.28
UBR4-201ENST00000375218 DEFB134Q4QY38 66 aa7.05□□□□□ -1.28
UBR4-201ENST00000375218 Q56UQ5 140 aa7.05□□□□□ -1.28
UBR4-201ENST00000375218 PIP4P1Q86T03 277 aa7.05□□□□□ -1.28
UBR4-201ENST00000375218 RBAKDNA6NC62 111 aa7.05□□□□□ -1.28
UBR4-201ENST00000375218 ZNF727A8MUV8 499 aa7.05□□□□□ -1.28
UBR4-201ENST00000375218 CRISP2P16562 243 aa7.05□□□□□ -1.28
UBR4-201ENST00000375218 CA6P23280 308 aa7.05□□□□□ -1.28
UBR4-201ENST00000375218 KRTDAPP60985 99 aa7.05□□□□□ -1.28
UBR4-201ENST00000375218 C19orf48Q6RUI8 117 aa7.05□□□□□ -1.28
UBR4-201ENST00000375218 PCP2Q8IVA1 136 aa7.05□□□□□ -1.28
UBR4-201ENST00000375218 GNPNAT1Q96EK6 184 aaPredicted RBP7.05□□□□□ -1.28
UBR4-201ENST00000375218 ZNF799Q96GE5 643 aa7.05□□□□□ -1.28
UBR4-201ENST00000375218 GABARAPL3Q9BY60 117 aa7.05□□□□□ -1.28
UBR4-201ENST00000375218 LAMTOR3Q9UHA4 124 aa7.05□□□□□ -1.28
UBR4-201ENST00000375218 LSM2Q9Y333 95 aaKnown RBP7.05□□□□□ -1.28
UBR4-201ENST00000375218 ZNF706Q9Y5V0 76 aaPredicted RBP7.05□□□□□ -1.28
UBR4-201ENST00000375218 NCOA6Q14686 2063 aaPredicted RBP7.05□□□□□ -1.28
UBR4-201ENST00000375218 CACNA1HO95180 2353 aa7.05□□□□□ -1.28
UBR4-201ENST00000375218 IGHV1OR21-1A0A087WYE8 117 aa7.04□□□□□ -1.28
UBR4-201ENST00000375218 TRAV41A0A0B4J266 112 aa7.04□□□□□ -1.28
UBR4-201ENST00000375218 TMEM250H0YL14 139 aa7.04□□□□□ -1.28
UBR4-201ENST00000375218 SYNGR2O43760 224 aa7.04□□□□□ -1.28
UBR4-201ENST00000375218 SSR2P43308 183 aa7.04□□□□□ -1.28
UBR4-201ENST00000375218 FAM3DQ96BQ1 224 aa7.04□□□□□ -1.28
UBR4-201ENST00000375218 MBD6Q96DN6 1003 aa7.04□□□□□ -1.28
UBR4-201ENST00000375218 FAM30AQ9NZY2 134 aa7.04□□□□□ -1.28
UBR4-201ENST00000375218 SNRPD3P62318 126 aaKnown RBP7.04□□□□□ -1.28
UBR4-201ENST00000375218 LINC00526Q96FQ7 95 aa7.04□□□□□ -1.28
UBR4-201ENST00000375218 IGKV1D-42A0A075B6H8 117 aa7.04□□□□□ -1.28
UBR4-201ENST00000375218 LOC100131303A0A0U1RQF7 123 aa7.04□□□□□ -1.28
UBR4-201ENST00000375218 M0R381 172 aa7.04□□□□□ -1.28
UBR4-201ENST00000375218 SDCBPO00560 298 aaPredicted RBP7.04□□□□□ -1.28
UBR4-201ENST00000375218 GFRA3O60609 400 aa7.04□□□□□ -1.28
UBR4-201ENST00000375218 LMO1P25800 156 aa7.04□□□□□ -1.28
UBR4-201ENST00000375218 MRGPREQ86SM8 312 aa7.04□□□□□ -1.28
UBR4-201ENST00000375218 OR5H2Q8NGV7 314 aa7.04□□□□□ -1.28
UBR4-201ENST00000375218 PROK2Q9HC23 129 aa7.04□□□□□ -1.28
UBR4-201ENST00000375218 MUC6Q6W4X9 2439 aa7.04□□□□□ -1.28
UBR4-201ENST00000375218 A0A1B0GVT2 93 aa7.04□□□□□ -1.28
UBR4-201ENST00000375218 ADARB2-AS1A8MUL3 147 aa7.04□□□□□ -1.28
UBR4-201ENST00000375218 LGALS9O00182 355 aa7.04□□□□□ -1.28
UBR4-201ENST00000375218 ANGPTL7O43827 346 aa7.04□□□□□ -1.28
UBR4-201ENST00000375218 SCRG1O75711 98 aa7.04□□□□□ -1.28
UBR4-201ENST00000375218 MDKP21741 143 aaPredicted RBP7.04□□□□□ -1.28
UBR4-201ENST00000375218 LOXL1Q08397 574 aaPredicted RBP7.04□□□□□ -1.28
UBR4-201ENST00000375218 GUSBP11Q6P575 273 aa7.04□□□□□ -1.28
UBR4-201ENST00000375218 OR10G2Q8NGC3 310 aa7.04□□□□□ -1.28
UBR4-201ENST00000375218 TMEM255BQ8WV15 326 aa7.04□□□□□ -1.28
UBR4-201ENST00000375218 ARHGAP21Q5T5U3 1957 aa7.03□□□□□ -1.28
UBR4-201ENST00000375218 JTBO76095 146 aa7.03□□□□□ -1.28
UBR4-201ENST00000375218 LINC00173Q6ZV60 143 aa7.03□□□□□ -1.28
UBR4-201ENST00000375218 C19orf73Q9NVV2 129 aa7.03□□□□□ -1.28
UBR4-201ENST00000375218 NDUFB11Q9NX14 153 aa7.03□□□□□ -1.28
UBR4-201ENST00000375218 PCNX2A6NKB5 2137 aa7.03□□□□□ -1.28
UBR4-201ENST00000375218 FOXF1Q12946 379 aa7.03□□□□□ -1.28
UBR4-201ENST00000375218 EPDR1Q9UM22 224 aa7.03□□□□□ -1.28
UBR4-201ENST00000375218 C3orf85A0A1B0GTC6 90 aa7.03□□□□□ -1.28
UBR4-201ENST00000375218 A0A1W2PPM0 123 aa7.03□□□□□ -1.28
UBR4-201ENST00000375218 RPL7L1Q6DKI1 246 aaKnown RBP7.03□□□□□ -1.28
UBR4-201ENST00000375218 C9orf40Q8IXQ3 194 aa7.03□□□□□ -1.28
UBR4-201ENST00000375218 APCDD1LQ8NCL9 501 aa7.03□□□□□ -1.28
UBR4-201ENST00000375218 POP5Q969H6 163 aaKnown RBP7.03□□□□□ -1.28
UBR4-201ENST00000375218 MOB4Q9Y3A3 225 aa7.03□□□□□ -1.28
UBR4-201ENST00000375218 DPRXA6NFQ7 191 aa7.02□□□□□ -1.29
UBR4-201ENST00000375218 H3BRM9 83 aa7.02□□□□□ -1.29
UBR4-201ENST00000375218 SEC11AP67812 179 aa7.02□□□□□ -1.29
UBR4-201ENST00000375218 INSL4Q14641 139 aa7.02□□□□□ -1.29
UBR4-201ENST00000375218 RRN3P1Q2M238 152 aa7.02□□□□□ -1.29
UBR4-201ENST00000375218 GAGE13Q4V321 117 aa7.02□□□□□ -1.29
UBR4-201ENST00000375218 GVQW1Q8N7I0 195 aa7.02□□□□□ -1.29
UBR4-201ENST00000375218 ZNF721Q8TF20 911 aa7.02□□□□□ -1.29
UBR4-201ENST00000375218 MAP6D1Q9H9H5 199 aa7.02□□□□□ -1.29
UBR4-201ENST00000375218 LOC101059948A0A1B0GTJ6 334 aa7.02□□□□□ -1.29
UBR4-201ENST00000375218 MORN3Q6PF18 240 aaPredicted RBP7.02□□□□□ -1.29
UBR4-201ENST00000375218 C17orf77Q96MU5 243 aa7.02□□□□□ -1.29
UBR4-201ENST00000375218 AGPAT4-IT1Q9H0P7 198 aa7.02□□□□□ -1.29
UBR4-201ENST00000375218 NAA60Q9H7X0 242 aa7.02□□□□□ -1.29
UBR4-201ENST00000375218 IGSF10Q6WRI0 2623 aa7.02□□□□□ -1.29
UBR4-201ENST00000375218 GVINP1Q7Z2Y8 2422 aa7.02□□□□□ -1.29
UBR4-201ENST00000375218 HOXB6P17509 224 aaKnown RBP7.02□□□□□ -1.29
UBR4-201ENST00000375218 PCSK4Q6UW60 755 aa7.02□□□□□ -1.29
UBR4-201ENST00000375218 OR52P1PQ8NH57 321 aa7.02□□□□□ -1.29
UBR4-201ENST00000375218 RAB37Q96AX2 223 aa7.02□□□□□ -1.29
UBR4-201ENST00000375218 SLC39A9Q9NUM3 307 aa7.02□□□□□ -1.29
UBR4-201ENST00000375218 SPTBN4Q9H254 2564 aa7.01□□□□□ -1.29
UBR4-201ENST00000375218 FREM1Q5H8C1 2179 aa7.01□□□□□ -1.29
UBR4-201ENST00000375218 H0YIZ8 118 aa7.01□□□□□ -1.29
UBR4-201ENST00000375218 Q0VG73 95 aa7.01□□□□□ -1.29
UBR4-201ENST00000375218 RUSC1-AS1Q66K80 236 aa7.01□□□□□ -1.29
UBR4-201ENST00000375218 CMTM2Q8TAZ6 248 aa7.01□□□□□ -1.29
UBR4-201ENST00000375218 CALYQ9NYX4 217 aa7.01□□□□□ -1.29
UBR4-201ENST00000375218 FOLR3P41439 243 aa7.01□□□□□ -1.29
UBR4-201ENST00000375218 Q0VFX4 171 aa7.01□□□□□ -1.29
UBR4-201ENST00000375218 ZNF101Q8IZC7 436 aa7.01□□□□□ -1.29
UBR4-201ENST00000375218 TRBV20OR9-2A0A075B6H5 130 aa7.01□□□□□ -1.29
UBR4-201ENST00000375218 FAM24AA6NFZ4 105 aa7.01□□□□□ -1.29
UBR4-201ENST00000375218 NTN3O00634 580 aaPredicted RBP7.01□□□□□ -1.29
UBR4-201ENST00000375218 CRYGSP22914 178 aa7□□□□□ -1.29
UBR4-201ENST00000375218 OR8A1Q8NGG7 326 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms