RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 C20orf24Q9BUV8 137 aa8.31□□□□□ -1.08
HLA-DQA1-202ENST00000374949 SLC35B3Q9H1N7 401 aa8.31□□□□□ -1.08
HLA-DQA1-202ENST00000374949 ARL2-SNX15V9GYD0 113 aa8.31□□□□□ -1.08
HLA-DQA1-202ENST00000374949 IGHV3OR16-8A0A075B7F1 116 aa8.3□□□□□ -1.08
HLA-DQA1-202ENST00000374949 ZNF320A2RRD8 509 aa8.3□□□□□ -1.08
HLA-DQA1-202ENST00000374949 K7EMT4 169 aa8.3□□□□□ -1.08
HLA-DQA1-202ENST00000374949 SRP19P09132 144 aaKnown RBP8.3□□□□□ -1.08
HLA-DQA1-202ENST00000374949 NBEAP1P0C6P0 100 aa8.3□□□□□ -1.08
HLA-DQA1-202ENST00000374949 PYYP10082 97 aa8.3□□□□□ -1.08
HLA-DQA1-202ENST00000374949 HIST1H1EP10412 219 aaKnown RBP8.3□□□□□ -1.08
HLA-DQA1-202ENST00000374949 GP9P14770 177 aa8.3□□□□□ -1.08
HLA-DQA1-202ENST00000374949 CRYBB3P26998 211 aa8.3□□□□□ -1.08
HLA-DQA1-202ENST00000374949 UBE2G2P60604 165 aa8.3□□□□□ -1.08
HLA-DQA1-202ENST00000374949 UBE2L3P68036 154 aaKnown RBP8.3□□□□□ -1.08
HLA-DQA1-202ENST00000374949 MEF2BQ02080 365 aaPredicted RBP8.3□□□□□ -1.08
HLA-DQA1-202ENST00000374949 RPEL1Q2QD12 228 aa8.3□□□□□ -1.08
HLA-DQA1-202ENST00000374949 C4orf3Q8WVX3 66 aa8.3□□□□□ -1.08
HLA-DQA1-202ENST00000374949 U3KQE9 123 aa8.3□□□□□ -1.08
HLA-DQA1-202ENST00000374949 IGHV4OR15-8A0A075B7B6 117 aa8.29□□□□□ -1.08
HLA-DQA1-202ENST00000374949 A0A087WW49 117 aa8.29□□□□□ -1.08
HLA-DQA1-202ENST00000374949 A0A1W2PRE2 83 aa8.29□□□□□ -1.08
HLA-DQA1-202ENST00000374949 FAM74A7A6NL05 159 aa8.29□□□□□ -1.08
HLA-DQA1-202ENST00000374949 C11orf94C9JXX5 98 aa8.29□□□□□ -1.08
HLA-DQA1-202ENST00000374949 ZNF207O43670 478 aaKnown RBP8.29□□□□□ -1.08
HLA-DQA1-202ENST00000374949 BUB3O43684 328 aa8.29□□□□□ -1.08
HLA-DQA1-202ENST00000374949 SFTA3P0C7M3 94 aa8.29□□□□□ -1.08
HLA-DQA1-202ENST00000374949 RPL7P18124 248 aaKnown RBP8.29□□□□□ -1.08
HLA-DQA1-202ENST00000374949 CD81P60033 236 aa8.29□□□□□ -1.08
HLA-DQA1-202ENST00000374949 C1orf194Q5T5A4 169 aa8.29□□□□□ -1.08
HLA-DQA1-202ENST00000374949 UNQ9165/PRO28630Q6UXU0 137 aa8.29□□□□□ -1.08
HLA-DQA1-202ENST00000374949 OR8I2Q8N0Y5 310 aa8.29□□□□□ -1.08
HLA-DQA1-202ENST00000374949 OR1N2Q8NGR9 330 aa8.29□□□□□ -1.08
HLA-DQA1-202ENST00000374949 TMEM190Q8WZ59 177 aa8.29□□□□□ -1.08
HLA-DQA1-202ENST00000374949 GPR82Q96P67 336 aa8.29□□□□□ -1.08
HLA-DQA1-202ENST00000374949 RCHY1Q96PM5 261 aa8.29□□□□□ -1.08
HLA-DQA1-202ENST00000374949 NKX6-2Q9C056 277 aaPredicted RBP8.29□□□□□ -1.08
HLA-DQA1-202ENST00000374949 ZNF256Q9Y2P7 627 aaPredicted RBP8.29□□□□□ -1.08
HLA-DQA1-202ENST00000374949 UFC1Q9Y3C8 167 aa8.29□□□□□ -1.08
HLA-DQA1-202ENST00000374949 YTHDF2Q9Y5A9 579 aaKnown RBP8.29□□□□□ -1.08
HLA-DQA1-202ENST00000374949 HUWE1Q7Z6Z7 4374 aaKnown RBP8.29□□□□□ -1.08
HLA-DQA1-202ENST00000374949 DNAH7Q8WXX0 4024 aa8.29□□□□□ -1.08
HLA-DQA1-202ENST00000374949 SORL1Q92673 2214 aa8.29□□□□□ -1.08
HLA-DQA1-202ENST00000374949 A0A1W2PS18 150 aa8.28□□□□□ -1.08
HLA-DQA1-202ENST00000374949 F6UZH7 168 aa8.28□□□□□ -1.08
HLA-DQA1-202ENST00000374949 F8W036 122 aa8.28□□□□□ -1.08
HLA-DQA1-202ENST00000374949 LINC01619G3V211 115 aa8.28□□□□□ -1.08
HLA-DQA1-202ENST00000374949 LGALS9O00182 355 aa8.28□□□□□ -1.08
HLA-DQA1-202ENST00000374949 MRPS12O15235 138 aaKnown RBP8.28□□□□□ -1.08
HLA-DQA1-202ENST00000374949 PDE6DO43924 150 aa8.28□□□□□ -1.08
HLA-DQA1-202ENST00000374949 ZP3P21754 424 aa8.28□□□□□ -1.08
HLA-DQA1-202ENST00000374949 BLNKQ8WV28 456 aa8.28□□□□□ -1.08
HLA-DQA1-202ENST00000374949 GRAMD2BQ96HH9 432 aa8.28□□□□□ -1.08
HLA-DQA1-202ENST00000374949 LINC00052Q96N35 136 aa8.28□□□□□ -1.08
HLA-DQA1-202ENST00000374949 SEC11CQ9BY50 192 aa8.28□□□□□ -1.08
HLA-DQA1-202ENST00000374949 SACSQ9NZJ4 4579 aa8.27□□□□□ -1.08
HLA-DQA1-202ENST00000374949 LCE6AA0A183 80 aa8.27□□□□□ -1.09
HLA-DQA1-202ENST00000374949 TMEM250H0YL14 139 aa8.27□□□□□ -1.09
HLA-DQA1-202ENST00000374949 H3BQ15 152 aa8.27□□□□□ -1.09
HLA-DQA1-202ENST00000374949 APOHP02749 345 aaPredicted RBP8.27□□□□□ -1.09
HLA-DQA1-202ENST00000374949 GALR1P47211 349 aa8.27□□□□□ -1.09
HLA-DQA1-202ENST00000374949 ATP5G3P48201 142 aa8.27□□□□□ -1.09
HLA-DQA1-202ENST00000374949 CEBPGP53567 150 aa8.27□□□□□ -1.09
HLA-DQA1-202ENST00000374949 RANP62826 216 aaKnown RBP8.27□□□□□ -1.09
HLA-DQA1-202ENST00000374949 SUMO1P63165 101 aaKnown RBP8.27□□□□□ -1.09
HLA-DQA1-202ENST00000374949 FHL3Q13643 280 aa8.27□□□□□ -1.09
HLA-DQA1-202ENST00000374949 KLF5Q13887 457 aaPredicted RBP8.27□□□□□ -1.09
HLA-DQA1-202ENST00000374949 TM4SF20Q53R12 229 aa8.27□□□□□ -1.09
HLA-DQA1-202ENST00000374949 SOHLH1Q5JUK2 328 aa8.27□□□□□ -1.09
HLA-DQA1-202ENST00000374949 C10orf91Q5T1B1 145 aa8.27□□□□□ -1.09
HLA-DQA1-202ENST00000374949 C16orf54Q6UWD8 224 aa8.27□□□□□ -1.09
HLA-DQA1-202ENST00000374949 SBSPONQ8IVN8 264 aa8.27□□□□□ -1.09
HLA-DQA1-202ENST00000374949 OR11H1Q8NG94 326 aa8.27□□□□□ -1.09
HLA-DQA1-202ENST00000374949 ZNF586Q9NXT0 402 aa8.27□□□□□ -1.09
HLA-DQA1-202ENST00000374949 SMPXQ9UHP9 88 aa8.27□□□□□ -1.09
HLA-DQA1-202ENST00000374949 SMAD5-AS1Q9Y6J3 95 aa8.27□□□□□ -1.09
HLA-DQA1-202ENST00000374949 TRBV19A0A075B6N1 114 aa8.26□□□□□ -1.09
HLA-DQA1-202ENST00000374949 IGHV3-49A0A0A0MS15 119 aa8.26□□□□□ -1.09
HLA-DQA1-202ENST00000374949 IGHV3-66A0A0C4DH42 116 aa8.26□□□□□ -1.09
HLA-DQA1-202ENST00000374949 IGHV7-4-1A0A0J9YVY3 117 aa8.26□□□□□ -1.09
HLA-DQA1-202ENST00000374949 PGPA6NDG6 321 aa8.26□□□□□ -1.09
HLA-DQA1-202ENST00000374949 ZNF785A8K8V0 405 aa8.26□□□□□ -1.09
HLA-DQA1-202ENST00000374949 SNRPCP09234 159 aaKnown RBP8.26□□□□□ -1.09
HLA-DQA1-202ENST00000374949 IGLC2P0DOY2 106 aa8.26□□□□□ -1.09
HLA-DQA1-202ENST00000374949 ATF4P18848 351 aaPredicted RBP8.26□□□□□ -1.09
HLA-DQA1-202ENST00000374949 CCDC28AQ8IWP9 274 aa8.26□□□□□ -1.09
HLA-DQA1-202ENST00000374949 LYPD1Q8N2G4 141 aa8.26□□□□□ -1.09
HLA-DQA1-202ENST00000374949 CYB561D1Q8N8Q1 229 aa8.26□□□□□ -1.09
HLA-DQA1-202ENST00000374949 DAZ1Q9NQZ3 744 aaKnown RBP8.26□□□□□ -1.09
HLA-DQA1-202ENST00000374949 IGHV3OR16-13A0A075B7E8 117 aa8.25□□□□□ -1.09
HLA-DQA1-202ENST00000374949 IGHV3-74A0A0B4J1X5 117 aa8.25□□□□□ -1.09
HLA-DQA1-202ENST00000374949 H3BTX0 84 aa8.25□□□□□ -1.09
HLA-DQA1-202ENST00000374949 BMI1P35226 326 aa8.25□□□□□ -1.09
HLA-DQA1-202ENST00000374949 SYNJ2BPP57105 145 aa8.25□□□□□ -1.09
HLA-DQA1-202ENST00000374949 PSG9Q00887 426 aa8.25□□□□□ -1.09
HLA-DQA1-202ENST00000374949 PDE6HQ13956 83 aa8.25□□□□□ -1.09
HLA-DQA1-202ENST00000374949 ZFAND6Q6FIF0 208 aa8.25□□□□□ -1.09
HLA-DQA1-202ENST00000374949 C17orf77Q96MU5 243 aa8.25□□□□□ -1.09
HLA-DQA1-202ENST00000374949 ELOVL1Q9BW60 279 aa8.25□□□□□ -1.09
HLA-DQA1-202ENST00000374949 RHPN1-AS1Q9BWJ2 59 aa8.25□□□□□ -1.09
HLA-DQA1-202ENST00000374949 OTORQ9NRC9 128 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms