RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 IGHV4-30-2A0A087WSY4 118 aa5.16□□□□□ -1.58
PTPN3-202ENST00000374541 PAX4O43316 350 aa5.16□□□□□ -1.58
PTPN3-202ENST00000374541 CELA3BP08861 270 aa5.16□□□□□ -1.58
PTPN3-202ENST00000374541 RNF126Q9BV68 326 aa5.16□□□□□ -1.58
PTPN3-202ENST00000374541 SOCS3O14543 225 aa5.16□□□□□ -1.58
PTPN3-202ENST00000374541 EFNB3Q15768 340 aa5.16□□□□□ -1.58
PTPN3-202ENST00000374541 RUSC1-AS1Q66K80 236 aa5.16□□□□□ -1.58
PTPN3-202ENST00000374541 SPSB3Q6PJ21 355 aa5.16□□□□□ -1.58
PTPN3-202ENST00000374541 ZNF474Q6S9Z5 364 aaPredicted RBP5.16□□□□□ -1.58
PTPN3-202ENST00000374541 BOD1L2Q8IYS8 172 aa5.16□□□□□ -1.58
PTPN3-202ENST00000374541 ALPK3Q96L96 1907 aa5.16□□□□□ -1.58
PTPN3-202ENST00000374541 COLCA2A8K830 154 aa5.16□□□□□ -1.58
PTPN3-202ENST00000374541 RPL32P62910 135 aaKnown RBP5.16□□□□□ -1.58
PTPN3-202ENST00000374541 LAIR2Q6ISS4 152 aa5.16□□□□□ -1.58
PTPN3-202ENST00000374541 ZNRF1Q8ND25 227 aa5.16□□□□□ -1.58
PTPN3-202ENST00000374541 GPHA2Q96T91 129 aa5.16□□□□□ -1.58
PTPN3-202ENST00000374541 SAA2-SAA4A0A096LPE2 208 aa5.15□□□□□ -1.58
PTPN3-202ENST00000374541 SAA2P0DJI9 122 aaPredicted RBP5.15□□□□□ -1.58
PTPN3-202ENST00000374541 COL8A2P25067 703 aa5.15□□□□□ -1.58
PTPN3-202ENST00000374541 LCN12Q6JVE5 192 aa5.15□□□□□ -1.58
PTPN3-202ENST00000374541 ZNF48Q96MX3 618 aaPredicted RBP5.15□□□□□ -1.58
PTPN3-202ENST00000374541 TMEM133Q9H2Q1 129 aa5.15□□□□□ -1.58
PTPN3-202ENST00000374541 ANAPC10Q9UM13 185 aa5.15□□□□□ -1.58
PTPN3-202ENST00000374541 DOCK9Q9BZ29 2069 aa5.15□□□□□ -1.58
PTPN3-202ENST00000374541 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.15□□□□□ -1.582e-8■■■■■ 31.6
PTPN3-202ENST00000374541 DAZAP2Q15038 168 aaPredicted RBP5.15□□□□□ -1.58
PTPN3-202ENST00000374541 GUSBP1Q15486 140 aa5.15□□□□□ -1.58
PTPN3-202ENST00000374541 SPATA31B1PQ5VZV4 182 aa5.15□□□□□ -1.58
PTPN3-202ENST00000374541 ATRAIDQ6UW56 229 aa5.15□□□□□ -1.58
PTPN3-202ENST00000374541 LINC00527Q9UJ94 153 aa5.15□□□□□ -1.58
PTPN3-202ENST00000374541 IGHV3OR16-13A0A075B7E8 117 aa5.15□□□□□ -1.58
PTPN3-202ENST00000374541 IGHV3-74A0A0B4J1X5 117 aa5.15□□□□□ -1.58
PTPN3-202ENST00000374541 GNG5P63218 68 aa5.15□□□□□ -1.58
PTPN3-202ENST00000374541 MAJINQ3KP22 176 aa5.15□□□□□ -1.58
PTPN3-202ENST00000374541 FAM216BQ8N7L0 139 aa5.15□□□□□ -1.58
PTPN3-202ENST00000374541 LY6G5BQ8NDX9 201 aa5.15□□□□□ -1.58
PTPN3-202ENST00000374541 RSPO3Q9BXY4 272 aaPredicted RBP5.15□□□□□ -1.58
PTPN3-202ENST00000374541 SPG11Q96JI7 2443 aa5.15□□□□□ -1.59
PTPN3-202ENST00000374541 CACNA1AO00555 2505 aa5.15□□□□□ -1.59
PTPN3-202ENST00000374541 TMEM258P61165 79 aa5.15□□□□□ -1.59
PTPN3-202ENST00000374541 ZNF415Q09FC8 603 aa5.15□□□□□ -1.59
PTPN3-202ENST00000374541 ARTNQ5T4W7 220 aa5.15□□□□□ -1.59
PTPN3-202ENST00000374541 ZNF497Q6ZNH5 498 aa5.15□□□□□ -1.59
PTPN3-202ENST00000374541 CITED1Q99966 193 aa5.15□□□□□ -1.59
PTPN3-202ENST00000374541 NAV3Q8IVL0 2385 aa5.15□□□□□ -1.59
PTPN3-202ENST00000374541 A0A087WX48 190 aa5.15□□□□□ -1.59
PTPN3-202ENST00000374541 FNDC10F2Z333 226 aa5.15□□□□□ -1.59
PTPN3-202ENST00000374541 LY6G6FQ5SQ64 297 aa5.15□□□□□ -1.59
PTPN3-202ENST00000374541 TPTE2P1Q5T6R2 138 aa5.15□□□□□ -1.59
PTPN3-202ENST00000374541 SIGLEC15Q6ZMC9 328 aa5.15□□□□□ -1.59
PTPN3-202ENST00000374541 LINC00477Q96M19 166 aa5.15□□□□□ -1.59
PTPN3-202ENST00000374541 TRGV9Q99603 122 aa5.15□□□□□ -1.59
PTPN3-202ENST00000374541 VWA8A3KMH1 1905 aa5.15□□□□□ -1.59
PTPN3-202ENST00000374541 CGB7P0DN87 165 aa5.15□□□□□ -1.59
PTPN3-202ENST00000374541 APOC4P55056 127 aa5.15□□□□□ -1.59
PTPN3-202ENST00000374541 KIR3DS1Q14943 382 aa5.15□□□□□ -1.59
PTPN3-202ENST00000374541 C9orf66Q5T8R8 295 aa5.15□□□□□ -1.59
PTPN3-202ENST00000374541 LINC00114Q6XXX2 140 aa5.15□□□□□ -1.59
PTPN3-202ENST00000374541 RNF144BQ7Z419 303 aa5.15□□□□□ -1.59
PTPN3-202ENST00000374541 PPDPFLQ8WWR9 84 aa5.15□□□□□ -1.59
PTPN3-202ENST00000374541 SDK2Q58EX2 2172 aa5.14□□□□□ -1.59
PTPN3-202ENST00000374541 HOXD3P31249 432 aaPredicted RBP5.14□□□□□ -1.59
PTPN3-202ENST00000374541 C20orf144Q9BQM9 153 aa5.14□□□□□ -1.59
PTPN3-202ENST00000374541 C1QTNF4Q9BXJ3 329 aa5.14□□□□□ -1.59
PTPN3-202ENST00000374541 IGHV3-35A0A0C4DH35 117 aa5.14□□□□□ -1.59
PTPN3-202ENST00000374541 FAM231BA6NCW3 169 aa5.14□□□□□ -1.59
PTPN3-202ENST00000374541 SYS1-DBNDD2H3BUS1 97 aa5.14□□□□□ -1.59
PTPN3-202ENST00000374541 PIP4P2Q8N4L2 257 aa5.14□□□□□ -1.59
PTPN3-202ENST00000374541 UBE2WQ96B02 151 aa5.14□□□□□ -1.59
PTPN3-202ENST00000374541 COX11Q9Y6N1 276 aa5.14□□□□□ -1.59
PTPN3-202ENST00000374541 SCN2AQ99250 2005 aa5.14□□□□□ -1.59
PTPN3-202ENST00000374541 TBX6O95947 436 aaPredicted RBP5.14□□□□□ -1.59
PTPN3-202ENST00000374541 IGHV3-48P01763 117 aa5.14□□□□□ -1.59
PTPN3-202ENST00000374541 TCRAP04437 139 aa5.14□□□□□ -1.59
PTPN3-202ENST00000374541 PAX8Q06710 450 aa5.14□□□□□ -1.59
PTPN3-202ENST00000374541 MUC21Q5SSG8 566 aa5.14□□□□□ -1.59
PTPN3-202ENST00000374541 GAGE2AQ6NT46 116 aa5.14□□□□□ -1.59
PTPN3-202ENST00000374541 ZNF329Q86UD4 541 aa5.14□□□□□ -1.59
PTPN3-202ENST00000374541 TIMM21Q9BVV7 248 aa5.14□□□□□ -1.59
PTPN3-202ENST00000374541 TSSC4Q9Y5U2 329 aaPredicted RBP5.14□□□□□ -1.59
PTPN3-202ENST00000374541 NOTCH4Q99466 2003 aa5.14□□□□□ -1.59
PTPN3-202ENST00000374541 MORN2Q502X0 79 aa5.14□□□□□ -1.59
PTPN3-202ENST00000374541 SFTA2Q6UW10 78 aa5.14□□□□□ -1.59
PTPN3-202ENST00000374541 UBL5Q9BZL1 73 aa5.14□□□□□ -1.59
PTPN3-202ENST00000374541 ZFHX3Q15911 3703 aa5.14□□□□□ -1.59
PTPN3-202ENST00000374541 IGHV3-66A0A0C4DH42 116 aa5.14□□□□□ -1.59
PTPN3-202ENST00000374541 MUC21A0A0G2JKD1 596 aa5.14□□□□□ -1.59
PTPN3-202ENST00000374541 MUC21A0A140T8X8 626 aa5.14□□□□□ -1.59
PTPN3-202ENST00000374541 CD24P25063 80 aa5.14□□□□□ -1.59
PTPN3-202ENST00000374541 KLRD1Q13241 179 aa5.14□□□□□ -1.59
PTPN3-202ENST00000374541 C1QL2Q7Z5L3 287 aa5.14□□□□□ -1.59
PTPN3-202ENST00000374541 LINC01551Q86U37 167 aa5.14□□□□□ -1.59
PTPN3-202ENST00000374541 TMEM141Q96I45 108 aa5.14□□□□□ -1.59
PTPN3-202ENST00000374541 MESP1Q9BRJ9 268 aa5.14□□□□□ -1.59
PTPN3-202ENST00000374541 D6R8Y8 96 aa5.13□□□□□ -1.59
PTPN3-202ENST00000374541 IGHV1-46P01743 117 aa5.13□□□□□ -1.59
PTPN3-202ENST00000374541 CEACAM8P31997 349 aaPredicted RBP5.13□□□□□ -1.59
PTPN3-202ENST00000374541 DUTP33316 252 aaKnown RBP5.13□□□□□ -1.59
PTPN3-202ENST00000374541 BTCP35070 178 aa5.13□□□□□ -1.59
PTPN3-202ENST00000374541 ZNF138P52744 262 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms