RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 TMUB2Q71RG4 321 aa11.76□□□□□ -0.53
HDHD3-202ENST00000374180 RETNQ9HD89 108 aa11.76□□□□□ -0.53
HDHD3-202ENST00000374180 AGRNO00468 2067 aa11.76□□□□□ -0.53
HDHD3-202ENST00000374180 A0A0D9SG52 128 aa11.76□□□□□ -0.53
HDHD3-202ENST00000374180 RNF222A6NCQ9 220 aa11.76□□□□□ -0.53
HDHD3-202ENST00000374180 ARPC5O15511 151 aa11.76□□□□□ -0.53
HDHD3-202ENST00000374180 ZNF345Q14585 488 aa11.76□□□□□ -0.53
HDHD3-202ENST00000374180 FFAR4Q5NUL3 377 aa11.76□□□□□ -0.53
HDHD3-202ENST00000374180 Q6ZWC4 215 aa11.76□□□□□ -0.53
HDHD3-202ENST00000374180 TRPT1Q86TN4 253 aaKnown RBP11.76□□□□□ -0.53
HDHD3-202ENST00000374180 MFFQ9GZY8 342 aa11.76□□□□□ -0.53
HDHD3-202ENST00000374180 RPRMQ9NS64 109 aa11.76□□□□□ -0.53
HDHD3-202ENST00000374180 SNRPCP09234 159 aaKnown RBP11.75□□□□□ -0.53
HDHD3-202ENST00000374180 IGFL4Q6B9Z1 124 aa11.75□□□□□ -0.53
HDHD3-202ENST00000374180 C20orf173Q96LM9 149 aa11.75□□□□□ -0.53
HDHD3-202ENST00000374180 TRAV8-2A0A0B4J237 113 aa11.74□□□□□ -0.53
HDHD3-202ENST00000374180 H3BMM0 161 aa11.74□□□□□ -0.53
HDHD3-202ENST00000374180 DEFB1P60022 68 aa11.74□□□□□ -0.53
HDHD3-202ENST00000374180 EBLN2Q6P2I7 272 aa11.74□□□□□ -0.53
HDHD3-202ENST00000374180 LCN15Q6UWW0 184 aa11.74□□□□□ -0.53
HDHD3-202ENST00000374180 FOXI2Q6ZQN5 318 aa11.74□□□□□ -0.53
HDHD3-202ENST00000374180 SLC51BQ86UW2 128 aa11.74□□□□□ -0.53
HDHD3-202ENST00000374180 COMMD7Q86VX2 200 aa11.74□□□□□ -0.53
HDHD3-202ENST00000374180 CCDC28AQ8IWP9 274 aa11.74□□□□□ -0.53
HDHD3-202ENST00000374180 HRH4Q9H3N8 390 aa11.74□□□□□ -0.53
HDHD3-202ENST00000374180 SAV1Q9H4B6 383 aaPredicted RBP11.74□□□□□ -0.53
HDHD3-202ENST00000374180 MED9Q9NWA0 146 aa11.74□□□□□ -0.53
HDHD3-202ENST00000374180 TIMM9Q9Y5J7 89 aa11.74□□□□□ -0.53
HDHD3-202ENST00000374180 RFNGQ9Y644 331 aa11.74□□□□□ -0.53
HDHD3-202ENST00000374180 H3BQ15 152 aa11.73□□□□□ -0.53
HDHD3-202ENST00000374180 CA1P00915 261 aaPredicted RBP11.73□□□□□ -0.53
HDHD3-202ENST00000374180 IGLC2P0DOY2 106 aa11.73□□□□□ -0.53
HDHD3-202ENST00000374180 HLA-DRB4P13762 266 aa11.73□□□□□ -0.53
HDHD3-202ENST00000374180 DEFB135Q30KP9 77 aa11.73□□□□□ -0.53
HDHD3-202ENST00000374180 SPATA31B1PQ5VZV4 182 aa11.73□□□□□ -0.53
HDHD3-202ENST00000374180 MORN3Q6PF18 240 aaPredicted RBP11.73□□□□□ -0.53
HDHD3-202ENST00000374180 MIR17HGQ75NE6 70 aa11.73□□□□□ -0.53
HDHD3-202ENST00000374180 RNF182Q8N6D2 247 aa11.73□□□□□ -0.53
HDHD3-202ENST00000374180 HSD17B11Q8NBQ5 300 aa11.73□□□□□ -0.53
HDHD3-202ENST00000374180 OVOL2Q9BRP0 275 aa11.73□□□□□ -0.53
HDHD3-202ENST00000374180 MRPL32Q9BYC8 188 aaKnown RBP11.73□□□□□ -0.53
HDHD3-202ENST00000374180 TMEM14CQ9P0S9 112 aa11.73□□□□□ -0.53
HDHD3-202ENST00000374180 TP53TG1Q9Y2A0 90 aa11.73□□□□□ -0.53
HDHD3-202ENST00000374180 HLA-DRB4X5D2U9 266 aa11.73□□□□□ -0.53
HDHD3-202ENST00000374180 BORCS7-ASMTA0A0B4J1R7 106 aa11.72□□□□□ -0.53
HDHD3-202ENST00000374180 H3BTX0 84 aa11.72□□□□□ -0.53
HDHD3-202ENST00000374180 TAAR5O14804 337 aa11.72□□□□□ -0.53
HDHD3-202ENST00000374180 SPRY2O43597 315 aa11.72□□□□□ -0.53
HDHD3-202ENST00000374180 SPP1P10451 314 aa11.72□□□□□ -0.53
HDHD3-202ENST00000374180 GUK1Q16774 197 aa11.72□□□□□ -0.53
HDHD3-202ENST00000374180 ACOT6Q3I5F7 207 aaPredicted RBP11.72□□□□□ -0.53
HDHD3-202ENST00000374180 GDF5OSQ5U4N7 250 aa11.72□□□□□ -0.53
HDHD3-202ENST00000374180 KCNRGQ8N5I3 272 aa11.72□□□□□ -0.53
HDHD3-202ENST00000374180 SLC50A1Q9BRV3 221 aa11.72□□□□□ -0.53
HDHD3-202ENST00000374180 ZNF331Q9NQX6 463 aaPredicted RBP11.72□□□□□ -0.53
HDHD3-202ENST00000374180 FUT9Q9Y231 359 aa11.72□□□□□ -0.53
HDHD3-202ENST00000374180 F6UB75 175 aa11.71□□□□□ -0.53
HDHD3-202ENST00000374180 IGKV3-20P01619 116 aa11.71□□□□□ -0.53
HDHD3-202ENST00000374180 HIST1H1EP10412 219 aaKnown RBP11.71□□□□□ -0.53
HDHD3-202ENST00000374180 NUTF2P61970 127 aaKnown RBP11.71□□□□□ -0.53
HDHD3-202ENST00000374180 RHOBP62745 196 aa11.71□□□□□ -0.53
HDHD3-202ENST00000374180 PSG3Q16557 428 aa11.71□□□□□ -0.53
HDHD3-202ENST00000374180 RPL7L1Q6DKI1 246 aaKnown RBP11.71□□□□□ -0.53
HDHD3-202ENST00000374180 ZNF738Q8NE65 137 aa11.71□□□□□ -0.53
HDHD3-202ENST00000374180 RNF183Q96D59 192 aa11.71□□□□□ -0.53
HDHD3-202ENST00000374180 FAM167A-AS1Q96KT0 104 aa11.71□□□□□ -0.53
HDHD3-202ENST00000374180 SLC25A2Q9BXI2 301 aa11.71□□□□□ -0.53
HDHD3-202ENST00000374180 ZNF586Q9NXT0 402 aa11.71□□□□□ -0.53
HDHD3-202ENST00000374180 A0A0J9YX75 114 aa11.7□□□□□ -0.54
HDHD3-202ENST00000374180 PYYP10082 97 aa11.7□□□□□ -0.54
HDHD3-202ENST00000374180 M6PRP20645 277 aa11.7□□□□□ -0.54
HDHD3-202ENST00000374180 ATP6V0CP27449 155 aa11.7□□□□□ -0.54
HDHD3-202ENST00000374180 HLA-DMBP28068 263 aa11.7□□□□□ -0.54
HDHD3-202ENST00000374180 OR4B1Q8NGF8 309 aa11.7□□□□□ -0.54
HDHD3-202ENST00000374180 SAT2Q96F10 170 aaPredicted RBP11.7□□□□□ -0.54
HDHD3-202ENST00000374180 WWC2-AS2Q96NR7 200 aa11.7□□□□□ -0.54
HDHD3-202ENST00000374180 PSMG3Q9BT73 122 aaPredicted RBP11.7□□□□□ -0.54
HDHD3-202ENST00000374180 KANTRA0A1W2PQU2 76 aa11.7□□□□□ -0.54
HDHD3-202ENST00000374180 SLC17A3O00476 420 aa11.7□□□□□ -0.54
HDHD3-202ENST00000374180 JTBO76095 146 aa11.7□□□□□ -0.54
HDHD3-202ENST00000374180 TMEM41BQ5BJD5 291 aa11.7□□□□□ -0.54
HDHD3-202ENST00000374180 TOR2AQ5JU69 321 aa11.7□□□□□ -0.54
HDHD3-202ENST00000374180 GNPNAT1Q96EK6 184 aaPredicted RBP11.7□□□□□ -0.54
HDHD3-202ENST00000374180 OR51M1Q9H341 326 aa11.7□□□□□ -0.54
HDHD3-202ENST00000374180 CLEC5AQ9NY25 188 aa11.7□□□□□ -0.54
HDHD3-202ENST00000374180 TRBV19A0A075B6N1 114 aa11.69□□□□□ -0.54
HDHD3-202ENST00000374180 A0A1W2PPV4 95 aa11.69□□□□□ -0.54
HDHD3-202ENST00000374180 OR7C2O60412 319 aa11.69□□□□□ -0.54
HDHD3-202ENST00000374180 GIG44P09565 113 aaPredicted RBP11.69□□□□□ -0.54
HDHD3-202ENST00000374180 TAS2R45P59539 299 aa11.69□□□□□ -0.54
HDHD3-202ENST00000374180 RAB2AP61019 212 aa11.69□□□□□ -0.54
HDHD3-202ENST00000374180 SERF2P84101 59 aa11.69□□□□□ -0.54
HDHD3-202ENST00000374180 OR10G4Q8NGN3 311 aa11.69□□□□□ -0.54
HDHD3-202ENST00000374180 OR10G9Q8NGN4 311 aa11.69□□□□□ -0.54
HDHD3-202ENST00000374180 OR10G7Q8NGN6 311 aa11.69□□□□□ -0.54
HDHD3-202ENST00000374180 OR2G3Q8NGZ4 309 aa11.69□□□□□ -0.54
HDHD3-202ENST00000374180 BLNKQ8WV28 456 aa11.69□□□□□ -0.54
HDHD3-202ENST00000374180 CLUHP3Q96NS8 147 aa11.69□□□□□ -0.54
HDHD3-202ENST00000374180 ARPC5LQ9BPX5 153 aa11.69□□□□□ -0.54
HDHD3-202ENST00000374180 PAXXQ9BUH6 204 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms