RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 RPL15P61313 204 aaKnown RBP11.55□□□□□ -0.56
LMX1B-202ENST00000373474 RPL36AP83881 106 aaKnown RBP11.55□□□□□ -0.56
LMX1B-202ENST00000373474 MBD3L2Q8NHZ7 208 aaPredicted RBP11.55□□□□□ -0.56
LMX1B-202ENST00000373474 RPL36ALQ969Q0 106 aaKnown RBP11.55□□□□□ -0.56
LMX1B-202ENST00000373474 C1orf147Q96MC9 270 aaPredicted RBP11.55□□□□□ -0.56
LMX1B-202ENST00000373474 HS3ST6Q96QI5 342 aa11.55□□□□□ -0.56
LMX1B-202ENST00000373474 LSM4Q9Y4Z0 139 aaKnown RBP11.55□□□□□ -0.56
LMX1B-202ENST00000373474 KIF26BQ2KJY2 2108 aa11.55□□□□□ -0.56
LMX1B-202ENST00000373474 TRAV41A0A0B4J266 112 aa11.55□□□□□ -0.56
LMX1B-202ENST00000373474 BUB1B-PAK6H3BSN5 160 aa11.55□□□□□ -0.56
LMX1B-202ENST00000373474 ZNF625Q96I27 306 aaPredicted RBP11.55□□□□□ -0.56
LMX1B-202ENST00000373474 CSTL1Q9H114 145 aa11.55□□□□□ -0.56
LMX1B-202ENST00000373474 ZNF138P52744 262 aa11.54□□□□□ -0.56
LMX1B-202ENST00000373474 IGHV1-24A0A0C4DH33 117 aa11.54□□□□□ -0.56
LMX1B-202ENST00000373474 MINOS1Q5TGZ0 78 aa11.54□□□□□ -0.56
LMX1B-202ENST00000373474 TMEM126AQ9H061 195 aa11.54□□□□□ -0.56
LMX1B-202ENST00000373474 MINOS1-NBL1R4GNA1 71 aa11.54□□□□□ -0.56
LMX1B-202ENST00000373474 OOSP1A8MZH6 123 aa11.54□□□□□ -0.56
LMX1B-202ENST00000373474 IGLC2P0DOY2 106 aa11.54□□□□□ -0.56
LMX1B-202ENST00000373474 IGLC3P0DOY3 106 aa11.54□□□□□ -0.56
LMX1B-202ENST00000373474 PRB4P10163 310 aaPredicted RBP11.54□□□□□ -0.56
LMX1B-202ENST00000373474 TAL2Q16559 108 aa11.54□□□□□ -0.56
LMX1B-202ENST00000373474 HTN3P15516 51 aa11.54□□□□□ -0.56
LMX1B-202ENST00000373474 ERCC8Q13216 396 aa11.54□□□□□ -0.56
LMX1B-202ENST00000373474 TCF20Q9UGU0 1960 aaKnown RBP11.53□□□□□ -0.56
LMX1B-202ENST00000373474 C15orf32Q32M92 178 aa11.53□□□□□ -0.56
LMX1B-202ENST00000373474 KLRD1Q13241 179 aa11.53□□□□□ -0.56
LMX1B-202ENST00000373474 PRR31Q5SQ13 230 aa11.53□□□□□ -0.56
LMX1B-202ENST00000373474 LINC00477Q96M19 166 aa11.53□□□□□ -0.56
LMX1B-202ENST00000373474 PRSS22Q9GZN4 317 aa11.53□□□□□ -0.56
LMX1B-202ENST00000373474 SIGLEC9Q9Y336 463 aa11.53□□□□□ -0.56
LMX1B-202ENST00000373474 HEATR5BQ9P2D3 2071 aa11.53□□□□□ -0.56
LMX1B-202ENST00000373474 INS-IGF2F8WCM5 200 aa11.53□□□□□ -0.56
LMX1B-202ENST00000373474 INSP01308 110 aa11.53□□□□□ -0.56
LMX1B-202ENST00000373474 GAGE5Q13069 117 aa11.53□□□□□ -0.56
LMX1B-202ENST00000373474 GAGE6Q13070 117 aa11.53□□□□□ -0.56
LMX1B-202ENST00000373474 OR11H6Q8NGC7 330 aa11.53□□□□□ -0.56
LMX1B-202ENST00000373474 M0R1W7 72 aa11.52□□□□□ -0.56
LMX1B-202ENST00000373474 NDUFC2O95298 119 aa11.52□□□□□ -0.56
LMX1B-202ENST00000373474 TCF15Q12870 199 aa11.52□□□□□ -0.56
LMX1B-202ENST00000373474 BOD1L2Q8IYS8 172 aa11.52□□□□□ -0.56
LMX1B-202ENST00000373474 TMEM141Q96I45 108 aa11.52□□□□□ -0.56
LMX1B-202ENST00000373474 RCHY1Q96PM5 261 aa11.52□□□□□ -0.56
LMX1B-202ENST00000373474 C1QTNF4Q9BXJ3 329 aa11.52□□□□□ -0.56
LMX1B-202ENST00000373474 TP53BP1Q12888 1972 aaPredicted RBP11.52□□□□□ -0.56
LMX1B-202ENST00000373474 AZU1P20160 251 aa11.52□□□□□ -0.56
LMX1B-202ENST00000373474 PAX9P55771 341 aa11.52□□□□□ -0.56
LMX1B-202ENST00000373474 C6orf226Q5I0X4 101 aa11.52□□□□□ -0.56
LMX1B-202ENST00000373474 C9orf139Q6ZV77 190 aa11.52□□□□□ -0.56
LMX1B-202ENST00000373474 PRIMA1Q86XR5 153 aa11.52□□□□□ -0.56
LMX1B-202ENST00000373474 SPACA3Q8IXA5 215 aa11.52□□□□□ -0.56
LMX1B-202ENST00000373474 SSC4DQ8WTU2 575 aa11.52□□□□□ -0.56
LMX1B-202ENST00000373474 A0A0G2JNJ9 132 aa11.52□□□□□ -0.57
LMX1B-202ENST00000373474 A0A1W2PPM0 123 aa11.52□□□□□ -0.57
LMX1B-202ENST00000373474 Q9UFV3 132 aa11.52□□□□□ -0.57
LMX1B-202ENST00000373474 CDKN1BP46527 198 aa11.52□□□□□ -0.57
LMX1B-202ENST00000373474 TRBV7-1A0A0A6YYK4 115 aa11.51□□□□□ -0.57
LMX1B-202ENST00000373474 Q86TA4 180 aa11.51□□□□□ -0.57
LMX1B-202ENST00000373474 CACNA1IQ9P0X4 2223 aa11.51□□□□□ -0.57
LMX1B-202ENST00000373474 WISP1O95388 367 aa11.51□□□□□ -0.57
LMX1B-202ENST00000373474 SRD5A1P18405 259 aa11.51□□□□□ -0.57
LMX1B-202ENST00000373474 POU2AF1Q16633 256 aa11.51□□□□□ -0.57
LMX1B-202ENST00000373474 ZNF492Q9P255 531 aa11.51□□□□□ -0.57
LMX1B-202ENST00000373474 COX8AP10176 69 aa11.51□□□□□ -0.57
LMX1B-202ENST00000373474 ETDBQ3ZM63 59 aa11.51□□□□□ -0.57
LMX1B-202ENST00000373474 SRSF8Q9BRL6 282 aaKnown RBP11.51□□□□□ -0.57
LMX1B-202ENST00000373474 LMO1P25800 156 aa11.51□□□□□ -0.57
LMX1B-202ENST00000373474 C5orf64Q2M2E5 130 aa11.51□□□□□ -0.57
LMX1B-202ENST00000373474 TRAV40A0A0B4J280 105 aa11.5□□□□□ -0.57
LMX1B-202ENST00000373474 FXYD7P58549 80 aa11.5□□□□□ -0.57
LMX1B-202ENST00000373474 STPG4Q8N801 248 aa11.5□□□□□ -0.57
LMX1B-202ENST00000373474 PFN1P07737 140 aaKnown RBP11.5□□□□□ -0.57
LMX1B-202ENST00000373474 ZNF524Q96C55 264 aa11.5□□□□□ -0.57
LMX1B-202ENST00000373474 A0A087WX48 190 aa11.5□□□□□ -0.57
LMX1B-202ENST00000373474 HOXD3P31249 432 aaPredicted RBP11.5□□□□□ -0.57
LMX1B-202ENST00000373474 ZNF474Q6S9Z5 364 aaPredicted RBP11.5□□□□□ -0.57
LMX1B-202ENST00000373474 TMEM14BQ9NUH8 114 aa11.5□□□□□ -0.57
LMX1B-202ENST00000373474 FRMPD3Q5JV73 1810 aa11.49□□□□□ -0.57
LMX1B-202ENST00000373474 SIVA1O15304 175 aa11.49□□□□□ -0.57
LMX1B-202ENST00000373474 ZNF726P1Q15940 193 aa11.49□□□□□ -0.57
LMX1B-202ENST00000373474 THADAQ6YHU6 1953 aa11.49□□□□□ -0.57
LMX1B-202ENST00000373474 IGKV1-16P04430 117 aa11.49□□□□□ -0.57
LMX1B-202ENST00000373474 TCTEX1D4Q5JR98 221 aa11.49□□□□□ -0.57
LMX1B-202ENST00000373474 ANKRD29Q8N6D5 301 aa11.49□□□□□ -0.57
LMX1B-202ENST00000373474 C18orf32Q8TCD1 76 aa11.49□□□□□ -0.57
LMX1B-202ENST00000373474 ABCA7Q8IZY2 2146 aa11.49□□□□□ -0.57
LMX1B-202ENST00000373474 MLANAQ16655 118 aa11.49□□□□□ -0.57
LMX1B-202ENST00000373474 LYPD2Q6UXB3 125 aa11.49□□□□□ -0.57
LMX1B-202ENST00000373474 IGHG4P01861 327 aa11.49□□□□□ -0.57
LMX1B-202ENST00000373474 LIME1Q9H400 295 aa11.49□□□□□ -0.57
LMX1B-202ENST00000373474 PROK2Q9HC23 129 aa11.49□□□□□ -0.57
LMX1B-202ENST00000373474 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.48□□□□□ -0.57
LMX1B-202ENST00000373474 A0A1W2PRX2 142 aa11.48□□□□□ -0.57
LMX1B-202ENST00000373474 EFNA4P52798 201 aa11.48□□□□□ -0.57
LMX1B-202ENST00000373474 LGALS9BQ3B8N2 356 aa11.48□□□□□ -0.57
LMX1B-202ENST00000373474 LGALS9CQ6DKI2 356 aa11.48□□□□□ -0.57
LMX1B-202ENST00000373474 AMN1Q8IY45 258 aa11.48□□□□□ -0.57
LMX1B-202ENST00000373474 TICRRQ7Z2Z1 1910 aa11.48□□□□□ -0.57
LMX1B-202ENST00000373474 SHANK2-AS3Q9BTD1 123 aa11.48□□□□□ -0.57
LMX1B-202ENST00000373474 TMEM75Q8N9X5 138 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms