RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 PEF1Q9UBV8 284 aaKnown RBP13.45□□□□□ -0.26
SSBP3-203ENST00000371319 GGCTO75223 188 aaKnown RBP13.44□□□□□ -0.26
SSBP3-203ENST00000371319 ZNF253O75346 499 aa13.44□□□□□ -0.26
SSBP3-203ENST00000371319 ELANEP08246 267 aa13.44□□□□□ -0.26
SSBP3-203ENST00000371319 PSG9Q00887 426 aa13.44□□□□□ -0.26
SSBP3-203ENST00000371319 BAGE2Q86Y30 109 aa13.44□□□□□ -0.26
SSBP3-203ENST00000371319 RNF152Q8N8N0 203 aa13.44□□□□□ -0.26
SSBP3-203ENST00000371319 NHLRC2Q8NBF2 726 aa13.44□□□□□ -0.26
SSBP3-203ENST00000371319 CMTM2Q8TAZ6 248 aa13.44□□□□□ -0.26
SSBP3-203ENST00000371319 SGK494Q96LW2 274 aa13.44□□□□□ -0.26
SSBP3-203ENST00000371319 OR5B12Q96R08 314 aa13.44□□□□□ -0.26
SSBP3-203ENST00000371319 ESM1Q9NQ30 184 aa13.44□□□□□ -0.26
SSBP3-203ENST00000371319 FLNAP21333 2647 aaKnown RBP13.43□□□□□ -0.26
SSBP3-203ENST00000371319 TRBV24-1A0A075B6N3 115 aa13.43□□□□□ -0.26
SSBP3-203ENST00000371319 IGHV3OR16-13A0A075B7E8 117 aa13.43□□□□□ -0.26
SSBP3-203ENST00000371319 IGHV3-49A0A0A0MS15 119 aa13.43□□□□□ -0.26
SSBP3-203ENST00000371319 IGHV3-74A0A0B4J1X5 117 aa13.43□□□□□ -0.26
SSBP3-203ENST00000371319 UBE2G1P62253 170 aa13.43□□□□□ -0.26
SSBP3-203ENST00000371319 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.43□□□□□ -0.26
SSBP3-203ENST00000371319 GOLT1AQ6ZVE7 132 aa13.43□□□□□ -0.26
SSBP3-203ENST00000371319 PYGO2Q9BRQ0 406 aa13.43□□□□□ -0.26
SSBP3-203ENST00000371319 TMEM160Q9NX00 188 aa13.43□□□□□ -0.26
SSBP3-203ENST00000371319 CCDC168Q8NDH2 2452 aa13.43□□□□□ -0.26
SSBP3-203ENST00000371319 MXRA5Q9NR99 2828 aa13.42□□□□□ -0.26
SSBP3-203ENST00000371319 LTAP01374 205 aa13.42□□□□□ -0.26
SSBP3-203ENST00000371319 IGLV2-11P01706 119 aa13.42□□□□□ -0.26
SSBP3-203ENST00000371319 MGST1P10620 155 aaKnown RBP13.42□□□□□ -0.26
SSBP3-203ENST00000371319 C16orf54Q6UWD8 224 aa13.42□□□□□ -0.26
SSBP3-203ENST00000371319 IMMP2LQ96T52 175 aa13.42□□□□□ -0.26
SSBP3-203ENST00000371319 TRBV6-1A0A0K0K1D8 114 aa13.41□□□□□ -0.26
SSBP3-203ENST00000371319 DIRC3C9JPN6 131 aa13.41□□□□□ -0.26
SSBP3-203ENST00000371319 M0R3E3 92 aa13.41□□□□□ -0.26
SSBP3-203ENST00000371319 S100PP25815 95 aa13.41□□□□□ -0.26
SSBP3-203ENST00000371319 Q86TA4 180 aa13.41□□□□□ -0.26
SSBP3-203ENST00000371319 FAM210BQ96KR6 192 aa13.41□□□□□ -0.26
SSBP3-203ENST00000371319 AAMDCQ9H7C9 122 aa13.41□□□□□ -0.26
SSBP3-203ENST00000371319 OSTCQ9NRP0 149 aa13.41□□□□□ -0.26
SSBP3-203ENST00000371319 V9GYV3 84 aa13.41□□□□□ -0.26
SSBP3-203ENST00000371319 LOC105371267A0A1B0GV96 52 aa13.41□□□□□ -0.26
SSBP3-203ENST00000371319 FAM181BA6NEQ2 426 aa13.41□□□□□ -0.26
SSBP3-203ENST00000371319 ZNF785A8K8V0 405 aa13.41□□□□□ -0.26
SSBP3-203ENST00000371319 ERVFC1-1P60608 527 aa13.41□□□□□ -0.26
SSBP3-203ENST00000371319 GLMPQ8WWB7 406 aa13.41□□□□□ -0.26
SSBP3-203ENST00000371319 SMIM12Q96EX1 92 aa13.41□□□□□ -0.26
SSBP3-203ENST00000371319 SMR3AQ99954 134 aa13.41□□□□□ -0.26
SSBP3-203ENST00000371319 MLST8Q9BVC4 326 aa13.41□□□□□ -0.26
SSBP3-203ENST00000371319 RNASE7Q9H1E1 156 aaKnown RBP13.41□□□□□ -0.26
SSBP3-203ENST00000371319 ZNF331Q9NQX6 463 aaPredicted RBP13.41□□□□□ -0.26
SSBP3-203ENST00000371319 TRAV8-1A0A0A6YYK1 113 aa13.4□□□□□ -0.26
SSBP3-203ENST00000371319 HLA-DMBP28068 263 aa13.4□□□□□ -0.26
SSBP3-203ENST00000371319 Q6ZSV7 163 aa13.4□□□□□ -0.26
SSBP3-203ENST00000371319 TMEM75Q8N9X5 138 aa13.4□□□□□ -0.26
SSBP3-203ENST00000371319 MLXQ9UH92 298 aa13.4□□□□□ -0.26
SSBP3-203ENST00000371319 LGALS1P09382 135 aaKnown RBP13.39□□□□□ -0.27
SSBP3-203ENST00000371319 PRB4P10163 310 aaPredicted RBP13.39□□□□□ -0.27
SSBP3-203ENST00000371319 RPS10P46783 165 aaKnown RBP13.39□□□□□ -0.27
SSBP3-203ENST00000371319 C1QL4Q86Z23 238 aa13.39□□□□□ -0.27
SSBP3-203ENST00000371319 ARL6IP6Q8N6S5 226 aa13.39□□□□□ -0.27
SSBP3-203ENST00000371319 IL36BQ9NZH7 164 aa13.39□□□□□ -0.27
SSBP3-203ENST00000371319 C1orf196B1AJZ1 125 aa13.38□□□□□ -0.27
SSBP3-203ENST00000371319 FAM3BP58499 235 aaPredicted RBP13.38□□□□□ -0.27
SSBP3-203ENST00000371319 FOXL1Q12952 345 aa13.38□□□□□ -0.27
SSBP3-203ENST00000371319 PSG3Q16557 428 aa13.38□□□□□ -0.27
SSBP3-203ENST00000371319 IGFL4Q6B9Z1 124 aa13.38□□□□□ -0.27
SSBP3-203ENST00000371319 KCNIP4Q6PIL6 250 aa13.38□□□□□ -0.27
SSBP3-203ENST00000371319 FAM231DQ6ZW35 169 aa13.38□□□□□ -0.27
SSBP3-203ENST00000371319 Q71RC1 249 aaPredicted RBP13.38□□□□□ -0.27
SSBP3-203ENST00000371319 GPHB5Q86YW7 130 aa13.38□□□□□ -0.27
SSBP3-203ENST00000371319 UBE2E2Q96LR5 201 aa13.38□□□□□ -0.27
SSBP3-203ENST00000371319 FASNP49327 2511 aaKnown RBP13.38□□□□□ -0.27
SSBP3-203ENST00000371319 A0A1W2PPQ1 181 aa13.37□□□□□ -0.27
SSBP3-203ENST00000371319 ZNF320A2RRD8 509 aa13.37□□□□□ -0.27
SSBP3-203ENST00000371319 LY6G6DO95868 133 aa13.37□□□□□ -0.27
SSBP3-203ENST00000371319 TM4SF20Q53R12 229 aa13.37□□□□□ -0.27
SSBP3-203ENST00000371319 IBA57Q5T440 356 aaKnown RBP13.37□□□□□ -0.27
SSBP3-203ENST00000371319 PRNTQ86SH4 94 aa13.37□□□□□ -0.27
SSBP3-203ENST00000371319 ZFP82Q8N141 532 aa13.37□□□□□ -0.27
SSBP3-203ENST00000371319 SLC50A1Q9BRV3 221 aa13.37□□□□□ -0.27
SSBP3-203ENST00000371319 PSG8Q9UQ74 426 aa13.37□□□□□ -0.27
SSBP3-203ENST00000371319 TRAV8-2A0A0B4J237 113 aa13.37□□□□□ -0.27
SSBP3-203ENST00000371319 IGHV7-4-1A0A0J9YVY3 117 aa13.37□□□□□ -0.27
SSBP3-203ENST00000371319 SERTM2A0A1B0GWG4 89 aa13.37□□□□□ -0.27
SSBP3-203ENST00000371319 K7EMT4 169 aa13.37□□□□□ -0.27
SSBP3-203ENST00000371319 CSN1S1P47710 185 aa13.37□□□□□ -0.27
SSBP3-203ENST00000371319 FLI1Q01543 452 aaPredicted RBP13.37□□□□□ -0.27
SSBP3-203ENST00000371319 FAM106AQ4KMX7 169 aa13.37□□□□□ -0.27
SSBP3-203ENST00000371319 TMEM183AQ8IXX5 376 aa13.37□□□□□ -0.27
SSBP3-203ENST00000371319 KLHDC1Q8N7A1 406 aa13.37□□□□□ -0.27
SSBP3-203ENST00000371319 HECTD1Q9ULT8 2610 aa13.36□□□□□ -0.27
SSBP3-203ENST00000371319 K7EQM0 130 aa13.36□□□□□ -0.27
SSBP3-203ENST00000371319 CHEK1O14757 476 aa13.36□□□□□ -0.27
SSBP3-203ENST00000371319 MEOX2P50222 304 aa13.36□□□□□ -0.27
SSBP3-203ENST00000371319 RAB5BP61020 215 aa13.36□□□□□ -0.27
SSBP3-203ENST00000371319 SCGB2A2Q13296 93 aa13.36□□□□□ -0.27
SSBP3-203ENST00000371319 DAZ1Q9NQZ3 744 aaKnown RBP13.36□□□□□ -0.27
SSBP3-203ENST00000371319 ZNF492Q9P255 531 aa13.36□□□□□ -0.27
SSBP3-203ENST00000371319 IGHV4OR15-8A0A075B7B6 117 aa13.35□□□□□ -0.27
SSBP3-203ENST00000371319 A0A087WW49 117 aa13.35□□□□□ -0.27
SSBP3-203ENST00000371319 IGKV2-40A0A087WW87 121 aaPredicted RBP13.35□□□□□ -0.27
SSBP3-203ENST00000371319 A0A1W2PS18 150 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms