RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 CALYQ9NYX4 217 aa11.67□□□□□ -0.54
LMO4-201ENST00000370542 IDI2-AS1Q9NZ38 188 aa11.67□□□□□ -0.54
LMO4-201ENST00000370542 YTHDF2Q9Y5A9 579 aaKnown RBP11.67□□□□□ -0.54
LMO4-201ENST00000370542 A0A1W2PPI3 338 aa11.66□□□□□ -0.54
LMO4-201ENST00000370542 IGLC7A0M8Q6 106 aa11.66□□□□□ -0.54
LMO4-201ENST00000370542 PMCHP20382 165 aa11.66□□□□□ -0.54
LMO4-201ENST00000370542 DUTP33316 252 aaKnown RBP11.66□□□□□ -0.54
LMO4-201ENST00000370542 RHOGP84095 191 aa11.66□□□□□ -0.54
LMO4-201ENST00000370542 EBI3Q14213 229 aa11.66□□□□□ -0.54
LMO4-201ENST00000370542 MIC13Q5XKP0 118 aa11.66□□□□□ -0.54
LMO4-201ENST00000370542 ATP5L2Q7Z4Y8 100 aa11.66□□□□□ -0.54
LMO4-201ENST00000370542 NIT1Q86X76 327 aa11.66□□□□□ -0.54
LMO4-201ENST00000370542 TSKUQ8WUA8 353 aa11.66□□□□□ -0.54
LMO4-201ENST00000370542 TMEM190Q8WZ59 177 aa11.66□□□□□ -0.54
LMO4-201ENST00000370542 SMIM12Q96EX1 92 aa11.66□□□□□ -0.54
LMO4-201ENST00000370542 MRPL32Q9BYC8 188 aaKnown RBP11.66□□□□□ -0.54
LMO4-201ENST00000370542 PSG11Q9UQ72 335 aa11.66□□□□□ -0.54
LMO4-201ENST00000370542 TCRBV4S1A1TA0A5B7 111 aa11.65□□□□□ -0.54
LMO4-201ENST00000370542 PGPEP1LA6NFU8 196 aa11.65□□□□□ -0.54
LMO4-201ENST00000370542 SLC17A3O00476 420 aa11.65□□□□□ -0.54
LMO4-201ENST00000370542 HSBP1O75506 76 aa11.65□□□□□ -0.54
LMO4-201ENST00000370542 OR2J3O76001 311 aa11.65□□□□□ -0.54
LMO4-201ENST00000370542 FAM106CPP0CH98 169 aa11.65□□□□□ -0.54
LMO4-201ENST00000370542 SRIP30626 198 aa11.65□□□□□ -0.54
LMO4-201ENST00000370542 CENPWQ5EE01 88 aa11.65□□□□□ -0.54
LMO4-201ENST00000370542 C10orf99Q6UWK7 81 aa11.65□□□□□ -0.54
LMO4-201ENST00000370542 OR4X2Q8NGF9 303 aa11.65□□□□□ -0.54
LMO4-201ENST00000370542 PMCHL2Q9BQD1 86 aa11.65□□□□□ -0.54
LMO4-201ENST00000370542 MOB4Q9Y3A3 225 aa11.65□□□□□ -0.54
LMO4-201ENST00000370542 AMMECR1Q9Y4X0 333 aaPredicted RBP11.65□□□□□ -0.54
LMO4-201ENST00000370542 RYR2Q92736 4967 aa11.65□□□□□ -0.54
LMO4-201ENST00000370542 BMPR1BO00238 502 aa11.64□□□□□ -0.55
LMO4-201ENST00000370542 IGLL1P15814 213 aa11.64□□□□□ -0.55
LMO4-201ENST00000370542 CD33P20138 364 aa11.64□□□□□ -0.55
LMO4-201ENST00000370542 GPR12P47775 334 aa11.64□□□□□ -0.55
LMO4-201ENST00000370542 UBE2G1P62253 170 aa11.64□□□□□ -0.55
LMO4-201ENST00000370542 PRR20EP86478 221 aa11.64□□□□□ -0.55
LMO4-201ENST00000370542 PRR20CP86479 221 aa11.64□□□□□ -0.55
LMO4-201ENST00000370542 PRR20DP86480 221 aa11.64□□□□□ -0.55
LMO4-201ENST00000370542 PRR20BP86481 221 aa11.64□□□□□ -0.55
LMO4-201ENST00000370542 PRR20AP86496 221 aa11.64□□□□□ -0.55
LMO4-201ENST00000370542 STPG3Q8N7X2 389 aa11.64□□□□□ -0.55
LMO4-201ENST00000370542 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.64□□□□□ -0.55
LMO4-201ENST00000370542 RPEQ96AT9 228 aa11.64□□□□□ -0.55
LMO4-201ENST00000370542 GRAMD2BQ96HH9 432 aa11.64□□□□□ -0.55
LMO4-201ENST00000370542 JPT1Q9UK76 154 aa11.64□□□□□ -0.55
LMO4-201ENST00000370542 SH2D7A6NKC9 451 aaPredicted RBP11.63□□□□□ -0.55
LMO4-201ENST00000370542 H0YJW9 148 aa11.63□□□□□ -0.55
LMO4-201ENST00000370542 C15orf65H3BRN8 121 aa11.63□□□□□ -0.55
LMO4-201ENST00000370542 OR5AL1P0C617 328 aa11.63□□□□□ -0.55
LMO4-201ENST00000370542 BRWD1-AS2P59051 145 aa11.63□□□□□ -0.55
LMO4-201ENST00000370542 EGFEM1PQ0D2K5 195 aa11.63□□□□□ -0.55
LMO4-201ENST00000370542 DIAPH2-AS1Q14236 149 aa11.63□□□□□ -0.55
LMO4-201ENST00000370542 GCSAMLQ5JQS6 135 aa11.63□□□□□ -0.55
LMO4-201ENST00000370542 IBA57Q5T440 356 aaKnown RBP11.63□□□□□ -0.55
LMO4-201ENST00000370542 LINC00311Q8N616 119 aa11.63□□□□□ -0.55
LMO4-201ENST00000370542 C5orf56Q8N8D9 126 aa11.63□□□□□ -0.55
LMO4-201ENST00000370542 C8orf31Q8N9H6 132 aa11.63□□□□□ -0.55
LMO4-201ENST00000370542 OR52L2PQ8NGH6 319 aa11.63□□□□□ -0.55
LMO4-201ENST00000370542 RNASE8Q8TDE3 154 aaKnown RBP11.63□□□□□ -0.55
LMO4-201ENST00000370542 CHCHD1Q96BP2 118 aaKnown RBP11.63□□□□□ -0.55
LMO4-201ENST00000370542 C5orf30Q96GV9 206 aa11.63□□□□□ -0.55
LMO4-201ENST00000370542 ADTRPQ96IZ2 230 aa11.63□□□□□ -0.55
LMO4-201ENST00000370542 PLEKHA3Q9HB20 300 aa11.63□□□□□ -0.55
LMO4-201ENST00000370542 FOXA2Q9Y261 457 aaPredicted RBP11.63□□□□□ -0.55
LMO4-201ENST00000370542 A0A1W2PRX2 142 aa11.62□□□□□ -0.55
LMO4-201ENST00000370542 RRHO14718 337 aa11.62□□□□□ -0.55
LMO4-201ENST00000370542 IGHG2P01859 326 aa11.62□□□□□ -0.55
LMO4-201ENST00000370542 HLA-DRB1P01911 266 aa11.62□□□□□ -0.55
LMO4-201ENST00000370542 OR9G9P0C7N8 305 aa11.62□□□□□ -0.55
LMO4-201ENST00000370542 PF4V1P10720 104 aa11.62□□□□□ -0.55
LMO4-201ENST00000370542 SSTR5P35346 364 aa11.62□□□□□ -0.55
LMO4-201ENST00000370542 LINC00482Q8N8I6 264 aa11.62□□□□□ -0.55
LMO4-201ENST00000370542 OR4S2Q8NH73 311 aa11.62□□□□□ -0.55
LMO4-201ENST00000370542 RFESDQ8TAC1 157 aa11.62□□□□□ -0.55
LMO4-201ENST00000370542 C18orf32Q8TCD1 76 aa11.62□□□□□ -0.55
LMO4-201ENST00000370542 LEAP2Q969E1 77 aa11.62□□□□□ -0.55
LMO4-201ENST00000370542 ST6GALNAC6Q969X2 333 aa11.62□□□□□ -0.55
LMO4-201ENST00000370542 WWC2-AS2Q96NR7 200 aa11.62□□□□□ -0.55
LMO4-201ENST00000370542 S1PR3Q99500 378 aa11.62□□□□□ -0.55
LMO4-201ENST00000370542 MS4A6AQ9H2W1 248 aa11.62□□□□□ -0.55
LMO4-201ENST00000370542 HSBP1L1C9JCN9 74 aa11.61□□□□□ -0.55
LMO4-201ENST00000370542 K7ERU9 68 aa11.61□□□□□ -0.55
LMO4-201ENST00000370542 M0R2Z0 102 aa11.61□□□□□ -0.55
LMO4-201ENST00000370542 HINT1P49773 126 aaPredicted RBP11.61□□□□□ -0.55
LMO4-201ENST00000370542 HSPE1P61604 102 aaKnown RBP11.61□□□□□ -0.55
LMO4-201ENST00000370542 TMEM30BQ3MIR4 351 aa11.61□□□□□ -0.55
LMO4-201ENST00000370542 Q8N6K4 173 aa11.61□□□□□ -0.55
LMO4-201ENST00000370542 TMEM70Q9BUB7 260 aa11.61□□□□□ -0.55
LMO4-201ENST00000370542 PSMB11A5LHX3 300 aa11.6□□□□□ -0.55
LMO4-201ENST00000370542 C15orf61A6NNL5 157 aa11.6□□□□□ -0.55
LMO4-201ENST00000370542 F2Z2F3 143 aa11.6□□□□□ -0.55
LMO4-201ENST00000370542 K7EIL1 84 aa11.6□□□□□ -0.55
LMO4-201ENST00000370542 CRXO43186 299 aaPredicted RBP11.6□□□□□ -0.55
LMO4-201ENST00000370542 IGHV3-7P01780 117 aa11.6□□□□□ -0.55
LMO4-201ENST00000370542 PF4P02776 101 aa11.6□□□□□ -0.55
LMO4-201ENST00000370542 VAMP3Q15836 100 aa11.6□□□□□ -0.55
LMO4-201ENST00000370542 TMEM191AQ9H0A3 160 aa11.6□□□□□ -0.55
LMO4-201ENST00000370542 PRNDQ9UKY0 176 aa11.6□□□□□ -0.55
LMO4-201ENST00000370542 IGHV1-3A0A0C4DH29 117 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms