RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 ZNF345Q14585 488 aa10.92□□□□□ -0.66
COL9A1-204ENST00000370496 GUK1Q16774 197 aa10.92□□□□□ -0.66
COL9A1-204ENST00000370496 ACOT6Q3I5F7 207 aaPredicted RBP10.92□□□□□ -0.66
COL9A1-204ENST00000370496 IGFL4Q6B9Z1 124 aa10.92□□□□□ -0.66
COL9A1-204ENST00000370496 EBLN2Q6P2I7 272 aa10.92□□□□□ -0.66
COL9A1-204ENST00000370496 C20orf173Q96LM9 149 aa10.92□□□□□ -0.66
COL9A1-204ENST00000370496 PSMG3Q9BT73 122 aaPredicted RBP10.92□□□□□ -0.66
COL9A1-204ENST00000370496 CSTL1Q9H114 145 aa10.92□□□□□ -0.66
COL9A1-204ENST00000370496 HRH4Q9H3N8 390 aa10.92□□□□□ -0.66
COL9A1-204ENST00000370496 SAV1Q9H4B6 383 aaPredicted RBP10.92□□□□□ -0.66
COL9A1-204ENST00000370496 TMEM14CQ9P0S9 112 aa10.92□□□□□ -0.66
COL9A1-204ENST00000370496 RFNGQ9Y644 331 aa10.92□□□□□ -0.66
COL9A1-204ENST00000370496 HLA-DRB4X5D2U9 266 aa10.92□□□□□ -0.66
COL9A1-204ENST00000370496 TRAV8-2A0A0B4J237 113 aa10.91□□□□□ -0.66
COL9A1-204ENST00000370496 SLC17A3O00476 420 aa10.91□□□□□ -0.66
COL9A1-204ENST00000370496 TAAR5O14804 337 aa10.91□□□□□ -0.66
COL9A1-204ENST00000370496 PYYP10082 97 aa10.91□□□□□ -0.66
COL9A1-204ENST00000370496 SPP1P10451 314 aa10.91□□□□□ -0.66
COL9A1-204ENST00000370496 M6PRP20645 277 aa10.91□□□□□ -0.66
COL9A1-204ENST00000370496 TAS2R45P59539 299 aa10.91□□□□□ -0.66
COL9A1-204ENST00000370496 RAB2AP61019 212 aa10.91□□□□□ -0.66
COL9A1-204ENST00000370496 KHDC3LQ587J8 217 aa10.91□□□□□ -0.66
COL9A1-204ENST00000370496 GDF5OSQ5U4N7 250 aa10.91□□□□□ -0.66
COL9A1-204ENST00000370496 MORN3Q6PF18 240 aaPredicted RBP10.91□□□□□ -0.66
COL9A1-204ENST00000370496 AKAP14Q86UN6 197 aa10.91□□□□□ -0.66
COL9A1-204ENST00000370496 GNPNAT1Q96EK6 184 aaPredicted RBP10.91□□□□□ -0.66
COL9A1-204ENST00000370496 SH3BGRL3Q9H299 93 aa10.91□□□□□ -0.66
COL9A1-204ENST00000370496 AGRNO00468 2067 aa10.91□□□□□ -0.66
COL9A1-204ENST00000370496 HMSDA8MTL9 139 aa10.9□□□□□ -0.66
COL9A1-204ENST00000370496 F6UB75 175 aa10.9□□□□□ -0.66
COL9A1-204ENST00000370496 H3BQ15 152 aa10.9□□□□□ -0.66
COL9A1-204ENST00000370496 IGKV3-20P01619 116 aa10.9□□□□□ -0.66
COL9A1-204ENST00000370496 FAM122CQ6P4D5 195 aa10.9□□□□□ -0.66
COL9A1-204ENST00000370496 Q6ZWC4 215 aa10.9□□□□□ -0.66
COL9A1-204ENST00000370496 TCTE3Q8IZS6 198 aa10.9□□□□□ -0.66
COL9A1-204ENST00000370496 OR11H4Q8NGC9 324 aa10.9□□□□□ -0.66
COL9A1-204ENST00000370496 OR4B1Q8NGF8 309 aa10.9□□□□□ -0.66
COL9A1-204ENST00000370496 OR2G3Q8NGZ4 309 aa10.9□□□□□ -0.66
COL9A1-204ENST00000370496 ST6GAL2Q96JF0 529 aa10.9□□□□□ -0.66
COL9A1-204ENST00000370496 ARPC5LQ9BPX5 153 aa10.9□□□□□ -0.66
COL9A1-204ENST00000370496 ZNF331Q9NQX6 463 aaPredicted RBP10.9□□□□□ -0.66
COL9A1-204ENST00000370496 A0A1W2PPV4 95 aa10.9□□□□□ -0.67
COL9A1-204ENST00000370496 H3BMM0 161 aa10.9□□□□□ -0.67
COL9A1-204ENST00000370496 JTBO76095 146 aa10.9□□□□□ -0.67
COL9A1-204ENST00000370496 OR10J4P0C629 311 aa10.9□□□□□ -0.67
COL9A1-204ENST00000370496 HIST1H1EP10412 219 aaKnown RBP10.9□□□□□ -0.67
COL9A1-204ENST00000370496 HLA-DMBP28068 263 aa10.9□□□□□ -0.67
COL9A1-204ENST00000370496 NUTF2P61970 127 aaKnown RBP10.9□□□□□ -0.67
COL9A1-204ENST00000370496 UBE2L3P68036 154 aaKnown RBP10.9□□□□□ -0.67
COL9A1-204ENST00000370496 KCNRGQ8N5I3 272 aa10.9□□□□□ -0.67
COL9A1-204ENST00000370496 OR10G4Q8NGN3 311 aa10.9□□□□□ -0.67
COL9A1-204ENST00000370496 OR10G9Q8NGN4 311 aa10.9□□□□□ -0.67
COL9A1-204ENST00000370496 OR10G7Q8NGN6 311 aa10.9□□□□□ -0.67
COL9A1-204ENST00000370496 BLNKQ8WV28 456 aa10.9□□□□□ -0.67
COL9A1-204ENST00000370496 FAM167A-AS1Q96KT0 104 aa10.9□□□□□ -0.67
COL9A1-204ENST00000370496 PAXXQ9BUH6 204 aa10.9□□□□□ -0.67
COL9A1-204ENST00000370496 ZNF586Q9NXT0 402 aa10.9□□□□□ -0.67
COL9A1-204ENST00000370496 TRBV19A0A075B6N1 114 aa10.89□□□□□ -0.67
COL9A1-204ENST00000370496 A0A0D9SG52 128 aa10.89□□□□□ -0.67
COL9A1-204ENST00000370496 A0A0J9YX75 114 aa10.89□□□□□ -0.67
COL9A1-204ENST00000370496 KANTRA0A1W2PQU2 76 aa10.89□□□□□ -0.67
COL9A1-204ENST00000370496 SPRY2O43597 315 aa10.89□□□□□ -0.67
COL9A1-204ENST00000370496 PFDN1O60925 122 aa10.89□□□□□ -0.67
COL9A1-204ENST00000370496 MBP02144 154 aa10.89□□□□□ -0.67
COL9A1-204ENST00000370496 C4BPBP20851 252 aa10.89□□□□□ -0.67
COL9A1-204ENST00000370496 CDC34P49427 236 aaPredicted RBP10.89□□□□□ -0.67
COL9A1-204ENST00000370496 SERF2P84101 59 aa10.89□□□□□ -0.67
COL9A1-204ENST00000370496 PDE6HQ13956 83 aa10.89□□□□□ -0.67
COL9A1-204ENST00000370496 PSG3Q16557 428 aa10.89□□□□□ -0.67
COL9A1-204ENST00000370496 OR51M1Q9H341 326 aa10.89□□□□□ -0.67
COL9A1-204ENST00000370496 TP53TG1Q9Y2A0 90 aa10.89□□□□□ -0.67
COL9A1-204ENST00000370496 BCL2L11O43521 198 aa10.88□□□□□ -0.67
COL9A1-204ENST00000370496 ZNF253O75346 499 aa10.88□□□□□ -0.67
COL9A1-204ENST00000370496 HIST1H1AQ02539 215 aaPredicted RBP10.88□□□□□ -0.67
COL9A1-204ENST00000370496 TMEM41BQ5BJD5 291 aa10.88□□□□□ -0.67
COL9A1-204ENST00000370496 RPUSD4Q96CM3 377 aaKnown RBP10.88□□□□□ -0.67
COL9A1-204ENST00000370496 OVOL2Q9BRP0 275 aa10.88□□□□□ -0.67
COL9A1-204ENST00000370496 CLEC5AQ9NY25 188 aa10.88□□□□□ -0.67
COL9A1-204ENST00000370496 TENM3Q9P273 2699 aa10.87□□□□□ -0.67
COL9A1-204ENST00000370496 HUWE1Q7Z6Z7 4374 aaKnown RBP10.87□□□□□ -0.67
COL9A1-204ENST00000370496 EIF3GO75821 320 aaKnown RBP eCLIP10.87□□□□□ -0.67
COL9A1-204ENST00000370496 DUSP14O95147 198 aaKnown RBP10.87□□□□□ -0.67
COL9A1-204ENST00000370496 PSG9Q00887 426 aa10.87□□□□□ -0.67
COL9A1-204ENST00000370496 RNF141Q8WVD5 230 aa10.87□□□□□ -0.67
COL9A1-204ENST00000370496 RNF183Q96D59 192 aa10.87□□□□□ -0.67
COL9A1-204ENST00000370496 FXYD5Q96DB9 178 aa10.87□□□□□ -0.67
COL9A1-204ENST00000370496 SAT2Q96F10 170 aaPredicted RBP10.87□□□□□ -0.67
COL9A1-204ENST00000370496 ZNF471Q9BX82 626 aaPredicted RBP10.87□□□□□ -0.67
COL9A1-204ENST00000370496 C1QTNF4Q9BXJ3 329 aa10.87□□□□□ -0.67
COL9A1-204ENST00000370496 AAMDCQ9H7C9 122 aa10.87□□□□□ -0.67
COL9A1-204ENST00000370496 CYTL1Q9NRR1 136 aa10.87□□□□□ -0.67
COL9A1-204ENST00000370496 C1QBP02746 253 aa10.86□□□□□ -0.67
COL9A1-204ENST00000370496 NBEAP1P0C6P0 100 aa10.86□□□□□ -0.67
COL9A1-204ENST00000370496 ZNF705DP0CH99 300 aaPredicted RBP10.86□□□□□ -0.67
COL9A1-204ENST00000370496 ZNF705BP0CI00 300 aaPredicted RBP10.86□□□□□ -0.67
COL9A1-204ENST00000370496 PRB4P10163 310 aaPredicted RBP10.86□□□□□ -0.67
COL9A1-204ENST00000370496 CNN1P51911 297 aaKnown RBP10.86□□□□□ -0.67
COL9A1-204ENST00000370496 OR8A1Q8NGG7 326 aa10.86□□□□□ -0.67
COL9A1-204ENST00000370496 WWC2-AS2Q96NR7 200 aa10.86□□□□□ -0.67
COL9A1-204ENST00000370496 A0A1B0GVG6 124 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms