RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 SCGB1D4Q6XE38 83 aa8.36□□□□□ -1.07
PRPF38B-201ENST00000370021 ORMDL3Q8N138 153 aa8.36□□□□□ -1.07
PRPF38B-201ENST00000370021 TMEM75Q8N9X5 138 aa8.36□□□□□ -1.07
PRPF38B-201ENST00000370021 OR5AN1Q8NGI8 311 aa8.36□□□□□ -1.07
PRPF38B-201ENST00000370021 RITA1Q96K30 269 aa8.36□□□□□ -1.07
PRPF38B-201ENST00000370021 C8orf49Q96NF6 230 aa8.36□□□□□ -1.07
PRPF38B-201ENST00000370021 IGKV2-40A0A087WW87 121 aaPredicted RBP8.36□□□□□ -1.07
PRPF38B-201ENST00000370021 IGKV2D-40P01614 121 aaPredicted RBP8.36□□□□□ -1.07
PRPF38B-201ENST00000370021 KLF5Q13887 457 aaPredicted RBP8.36□□□□□ -1.07
PRPF38B-201ENST00000370021 MSMPQ1L6U9 139 aa8.36□□□□□ -1.07
PRPF38B-201ENST00000370021 NEU4Q8WWR8 484 aaPredicted RBP8.36□□□□□ -1.07
PRPF38B-201ENST00000370021 RALYQ9UKM9 306 aaKnown RBP8.36□□□□□ -1.07
PRPF38B-201ENST00000370021 SCGB1C2P0DMR2 95 aa8.36□□□□□ -1.07
PRPF38B-201ENST00000370021 HSD52Q0P140 79 aa8.36□□□□□ -1.07
PRPF38B-201ENST00000370021 SRSF9Q13242 221 aaKnown RBP eCLIP8.36□□□□□ -1.07
PRPF38B-201ENST00000370021 OSR1Q8TAX0 266 aaPredicted RBP8.36□□□□□ -1.07
PRPF38B-201ENST00000370021 ARPC1AQ92747 370 aa8.36□□□□□ -1.07
PRPF38B-201ENST00000370021 RPEQ96AT9 228 aa8.36□□□□□ -1.07
PRPF38B-201ENST00000370021 ARHGAP32A7KAX9 2087 aa8.35□□□□□ -1.07
PRPF38B-201ENST00000370021 ZNF785A8K8V0 405 aa8.35□□□□□ -1.07
PRPF38B-201ENST00000370021 SMAD7O15105 426 aaKnown RBP8.35□□□□□ -1.07
PRPF38B-201ENST00000370021 TMEM133Q9H2Q1 129 aa8.35□□□□□ -1.07
PRPF38B-201ENST00000370021 SIGLEC8Q9NYZ4 499 aa8.35□□□□□ -1.07
PRPF38B-201ENST00000370021 C2CD3Q4AC94 2353 aa8.35□□□□□ -1.07
PRPF38B-201ENST00000370021 DMXL2Q8TDJ6 3036 aa8.35□□□□□ -1.07
PRPF38B-201ENST00000370021 LYNX1G3V0Z9 82 aa8.35□□□□□ -1.07
PRPF38B-201ENST00000370021 K7EP34 96 aa8.35□□□□□ -1.07
PRPF38B-201ENST00000370021 LYNX1P0DP58 116 aa8.35□□□□□ -1.07
PRPF38B-201ENST00000370021 WFDC2Q14508 124 aa8.35□□□□□ -1.07
PRPF38B-201ENST00000370021 RPRMLQ8N4K4 120 aa8.35□□□□□ -1.07
PRPF38B-201ENST00000370021 SRSF8Q9BRL6 282 aaKnown RBP8.35□□□□□ -1.07
PRPF38B-201ENST00000370021 MGAQ8IWI9 3026 aa8.35□□□□□ -1.07
PRPF38B-201ENST00000370021 CEP192Q8TEP8 1941 aa8.35□□□□□ -1.07
PRPF38B-201ENST00000370021 F2RL2O00254 374 aa8.34□□□□□ -1.07
PRPF38B-201ENST00000370021 LTAP01374 205 aa8.34□□□□□ -1.07
PRPF38B-201ENST00000370021 HBDP02042 147 aa8.34□□□□□ -1.07
PRPF38B-201ENST00000370021 ZC2HC1BQ5TFG8 222 aa8.34□□□□□ -1.07
PRPF38B-201ENST00000370021 FAM231DQ6ZW35 169 aa8.34□□□□□ -1.07
PRPF38B-201ENST00000370021 ZNF502Q8TBZ5 544 aa8.34□□□□□ -1.07
PRPF38B-201ENST00000370021 DSCAMO60469 2012 aa8.34□□□□□ -1.07
PRPF38B-201ENST00000370021 A0A1W2PPM0 123 aa8.34□□□□□ -1.07
PRPF38B-201ENST00000370021 RUSC1-AS1Q66K80 236 aa8.34□□□□□ -1.07
PRPF38B-201ENST00000370021 KALRNO60229 2985 aa8.34□□□□□ -1.07
PRPF38B-201ENST00000370021 A0A1B0GV72 72 aa8.34□□□□□ -1.07
PRPF38B-201ENST00000370021 APOMO95445 188 aa8.34□□□□□ -1.07
PRPF38B-201ENST00000370021 Q86TA4 180 aa8.34□□□□□ -1.07
PRPF38B-201ENST00000370021 ZNF479Q96JC4 524 aa8.34□□□□□ -1.07
PRPF38B-201ENST00000370021 SCNM1Q9BWG6 230 aa8.34□□□□□ -1.07
PRPF38B-201ENST00000370021 C22orf46C9J442 243 aa8.33□□□□□ -1.08
PRPF38B-201ENST00000370021 H3BRM9 83 aa8.33□□□□□ -1.08
PRPF38B-201ENST00000370021 FXYD2P54710 66 aa8.33□□□□□ -1.08
PRPF38B-201ENST00000370021 RPL11P62913 178 aaKnown RBP8.33□□□□□ -1.08
PRPF38B-201ENST00000370021 WIPF2Q8TF74 440 aaPredicted RBP8.33□□□□□ -1.08
PRPF38B-201ENST00000370021 DDB2Q92466 427 aa8.33□□□□□ -1.08
PRPF38B-201ENST00000370021 SLC25A39Q9BZJ4 359 aaPredicted RBP8.33□□□□□ -1.08
PRPF38B-201ENST00000370021 NDUFA4L2Q9NRX3 87 aa8.33□□□□□ -1.08
PRPF38B-201ENST00000370021 ONECUT1Q9UBC0 465 aa8.33□□□□□ -1.08
PRPF38B-201ENST00000370021 SORL1Q92673 2214 aa8.33□□□□□ -1.08
PRPF38B-201ENST00000370021 TACC2O95359 2948 aa8.33□□□□□ -1.08
PRPF38B-201ENST00000370021 C19orf67A6NJJ6 358 aa8.33□□□□□ -1.08
PRPF38B-201ENST00000370021 SPRY2O43597 315 aa8.33□□□□□ -1.08
PRPF38B-201ENST00000370021 GATA1P15976 413 aaPredicted RBP8.33□□□□□ -1.08
PRPF38B-201ENST00000370021 ATP5G2Q06055 141 aa8.33□□□□□ -1.08
PRPF38B-201ENST00000370021 CLUHP3Q96NS8 147 aa8.33□□□□□ -1.08
PRPF38B-201ENST00000370021 MSRB1Q9NZV6 116 aa8.33□□□□□ -1.08
PRPF38B-201ENST00000370021 SP9P0CG40 484 aa8.33□□□□□ -1.08
PRPF38B-201ENST00000370021 CKS1BP61024 79 aa8.33□□□□□ -1.08
PRPF38B-201ENST00000370021 J3QW42 95 aa8.32□□□□□ -1.08
PRPF38B-201ENST00000370021 IGHV1-46P01743 117 aa8.32□□□□□ -1.08
PRPF38B-201ENST00000370021 LYPD2Q6UXB3 125 aa8.32□□□□□ -1.08
PRPF38B-201ENST00000370021 NDFIP1Q9BT67 221 aa8.32□□□□□ -1.08
PRPF38B-201ENST00000370021 MAP1LC3AQ9H492 121 aa8.32□□□□□ -1.08
PRPF38B-201ENST00000370021 CYSLTR1Q9Y271 337 aa8.32□□□□□ -1.08
PRPF38B-201ENST00000370021 G3V4G9 280 aa8.32□□□□□ -1.08
PRPF38B-201ENST00000370021 NPYP01303 97 aa8.32□□□□□ -1.08
PRPF38B-201ENST00000370021 IGKV3-15P01624 115 aa8.32□□□□□ -1.08
PRPF38B-201ENST00000370021 SLC25A48Q6ZT89 311 aaKnown RBP8.32□□□□□ -1.08
PRPF38B-201ENST00000370021 MYOZ3Q8TDC0 251 aa8.32□□□□□ -1.08
PRPF38B-201ENST00000370021 NPFFR1Q9GZQ6 430 aa8.32□□□□□ -1.08
PRPF38B-201ENST00000370021 TRAV40A0A0B4J280 105 aa8.32□□□□□ -1.08
PRPF38B-201ENST00000370021 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.32□□□□□ -1.08
PRPF38B-201ENST00000370021 TMEM200BQ69YZ2 307 aa8.32□□□□□ -1.08
PRPF38B-201ENST00000370021 C2orf91Q6ZV80 131 aa8.32□□□□□ -1.08
PRPF38B-201ENST00000370021 AGRNO00468 2067 aa8.32□□□□□ -1.08
PRPF38B-201ENST00000370021 ATMQ13315 3056 aa8.32□□□□□ -1.08
PRPF38B-201ENST00000370021 LINC01545Q5VT33 79 aa8.31□□□□□ -1.08
PRPF38B-201ENST00000370021 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.31□□□□□ -1.08
PRPF38B-201ENST00000370021 C8orf46Q8TAG6 207 aa8.31□□□□□ -1.08
PRPF38B-201ENST00000370021 GAFA1Q96PS6 74 aa8.31□□□□□ -1.08
PRPF38B-201ENST00000370021 CHAC1Q9BUX1 264 aa8.31□□□□□ -1.08
PRPF38B-201ENST00000370021 NGBQ9NPG2 151 aa8.31□□□□□ -1.08
PRPF38B-201ENST00000370021 VSTM5A8MXK1 200 aa8.31□□□□□ -1.08
PRPF38B-201ENST00000370021 CLEC3BP05452 202 aa8.31□□□□□ -1.08
PRPF38B-201ENST00000370021 RPL7P18124 248 aaKnown RBP8.31□□□□□ -1.08
PRPF38B-201ENST00000370021 PSMB2P49721 201 aa8.31□□□□□ -1.08
PRPF38B-201ENST00000370021 OR4X2Q8NGF9 303 aa8.31□□□□□ -1.08
PRPF38B-201ENST00000370021 OR5A1Q8NGJ0 315 aa8.31□□□□□ -1.08
PRPF38B-201ENST00000370021 SOX21Q9Y651 276 aaPredicted RBP8.31□□□□□ -1.08
PRPF38B-201ENST00000370021 A0A1B0GXF2 115 aa8.31□□□□□ -1.08
PRPF38B-201ENST00000370021 PRR33A8MZF0 331 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms