RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 IGLC1P0CG04 106 aa7.05□□□□□ -1.28
LCA5-201ENST00000369846 FAM106AQ4KMX7 169 aa7.05□□□□□ -1.28
LCA5-201ENST00000369846 LILRA6Q6PI73 481 aa7.05□□□□□ -1.28
LCA5-201ENST00000369846 PRADC1Q9BSG0 188 aa7.05□□□□□ -1.28
LCA5-201ENST00000369846 PRO1854Q9UHT4 67 aa7.05□□□□□ -1.28
LCA5-201ENST00000369846 PRUNE2Q8WUY3 3088 aa7.05□□□□□ -1.28
LCA5-201ENST00000369846 SCN10AQ9Y5Y9 1956 aa7.05□□□□□ -1.28
LCA5-201ENST00000369846 IGKV1-12A0A0C4DH73 117 aa7.04□□□□□ -1.28
LCA5-201ENST00000369846 IGKV1D-12P01611 117 aa7.04□□□□□ -1.28
LCA5-201ENST00000369846 C5orf47Q569G3 176 aa7.04□□□□□ -1.28
LCA5-201ENST00000369846 TMEM240Q5SV17 173 aa7.04□□□□□ -1.28
LCA5-201ENST00000369846 C10orf55Q5SWW7 151 aa7.04□□□□□ -1.28
LCA5-201ENST00000369846 REPIN1Q9BWE0 567 aaKnown RBP7.04□□□□□ -1.28
LCA5-201ENST00000369846 PKIGQ9Y2B9 76 aa7.04□□□□□ -1.28
LCA5-201ENST00000369846 SNRPD3P62318 126 aaKnown RBP7.04□□□□□ -1.28
LCA5-201ENST00000369846 COA6Q5JTJ3 125 aaKnown RBP7.04□□□□□ -1.28
LCA5-201ENST00000369846 ZNF474Q6S9Z5 364 aaPredicted RBP7.04□□□□□ -1.28
LCA5-201ENST00000369846 PCP2Q8IVA1 136 aa7.04□□□□□ -1.28
LCA5-201ENST00000369846 CEND1Q8N111 149 aa7.04□□□□□ -1.28
LCA5-201ENST00000369846 Q8TAT8 98 aa7.04□□□□□ -1.28
LCA5-201ENST00000369846 CARD19Q96LW7 228 aa7.04□□□□□ -1.28
LCA5-201ENST00000369846 SRXN1Q9BYN0 137 aa7.04□□□□□ -1.28
LCA5-201ENST00000369846 TFF1P04155 84 aa7.04□□□□□ -1.28
LCA5-201ENST00000369846 MESP2Q0VG99 397 aa7.04□□□□□ -1.28
LCA5-201ENST00000369846 ZNF876PQ49A33 203 aa7.04□□□□□ -1.28
LCA5-201ENST00000369846 ACP7Q6ZNF0 438 aa7.04□□□□□ -1.28
LCA5-201ENST00000369846 DNAJC30Q96LL9 226 aa7.04□□□□□ -1.28
LCA5-201ENST00000369846 DUX5Q96PT3 197 aa7.04□□□□□ -1.28
LCA5-201ENST00000369846 DSCAML1Q8TD84 2053 aa7.04□□□□□ -1.28
LCA5-201ENST00000369846 WDR87Q6ZQQ6 2873 aa7.04□□□□□ -1.28
LCA5-201ENST00000369846 YPEL1O60688 119 aa7.04□□□□□ -1.28
LCA5-201ENST00000369846 FAM166AQ6J272 317 aa7.04□□□□□ -1.28
LCA5-201ENST00000369846 LINC00114Q6XXX2 140 aa7.04□□□□□ -1.28
LCA5-201ENST00000369846 YPEL2Q96QA6 119 aa7.04□□□□□ -1.28
LCA5-201ENST00000369846 TNRC6AQ8NDV7 1962 aaKnown RBP7.03□□□□□ -1.28
LCA5-201ENST00000369846 FAM236AA0A1B0GUQ0 79 aa7.03□□□□□ -1.28
LCA5-201ENST00000369846 FAM236BA0A1B0GV22 79 aa7.03□□□□□ -1.28
LCA5-201ENST00000369846 NDUFC2O95298 119 aa7.03□□□□□ -1.28
LCA5-201ENST00000369846 SMIM10L1P0DMW3 83 aa7.03□□□□□ -1.28
LCA5-201ENST00000369846 DUTP33316 252 aaKnown RBP7.03□□□□□ -1.28
LCA5-201ENST00000369846 RBMY1FQ15415 496 aaKnown RBP7.03□□□□□ -1.28
LCA5-201ENST00000369846 FAM216BQ8N7L0 139 aa7.03□□□□□ -1.28
LCA5-201ENST00000369846 SVIPQ8NHG7 77 aa7.03□□□□□ -1.28
LCA5-201ENST00000369846 SMIM10Q96HG1 83 aa7.03□□□□□ -1.28
LCA5-201ENST00000369846 USF3Q68DE3 2245 aa7.03□□□□□ -1.28
LCA5-201ENST00000369846 TMEM213A2RRL7 107 aa7.03□□□□□ -1.28
LCA5-201ENST00000369846 G3V4G9 280 aa7.03□□□□□ -1.28
LCA5-201ENST00000369846 TAX1BP3O14907 124 aa7.03□□□□□ -1.28
LCA5-201ENST00000369846 HLA-DRB4P13762 266 aa7.03□□□□□ -1.28
LCA5-201ENST00000369846 FAM214BQ7L5A3 538 aa7.03□□□□□ -1.28
LCA5-201ENST00000369846 BRK1Q8WUW1 75 aa7.03□□□□□ -1.28
LCA5-201ENST00000369846 LYZL4Q96KX0 146 aa7.03□□□□□ -1.28
LCA5-201ENST00000369846 PLA2G2FQ9BZM2 168 aa7.03□□□□□ -1.28
LCA5-201ENST00000369846 LIME1Q9H400 295 aa7.03□□□□□ -1.28
LCA5-201ENST00000369846 HLA-DRB4X5D2U9 266 aa7.03□□□□□ -1.28
LCA5-201ENST00000369846 ZNF462Q96JM2 2506 aa7.03□□□□□ -1.28
LCA5-201ENST00000369846 SAA2-SAA4A0A096LPE2 208 aa7.03□□□□□ -1.28
LCA5-201ENST00000369846 SAA2P0DJI9 122 aaPredicted RBP7.03□□□□□ -1.28
LCA5-201ENST00000369846 SRSF7Q16629 238 aaKnown RBP eCLIP7.03□□□□□ -1.28
LCA5-201ENST00000369846 MRPL35Q9NZE8 188 aaKnown RBP7.03□□□□□ -1.28
LCA5-201ENST00000369846 PHF3Q92576 2039 aaKnown RBP7.03□□□□□ -1.28
LCA5-201ENST00000369846 K7EMI3 77 aa7.02□□□□□ -1.28
LCA5-201ENST00000369846 PRCDQ00LT1 54 aa7.02□□□□□ -1.28
LCA5-201ENST00000369846 C14orf178Q8N769 122 aaPredicted RBP7.02□□□□□ -1.28
LCA5-201ENST00000369846 EEF1AKMT3Q96AZ1 226 aa7.02□□□□□ -1.28
LCA5-201ENST00000369846 DUX3Q96PT4 197 aa7.02□□□□□ -1.28
LCA5-201ENST00000369846 TTTY12Q9BZ98 90 aa7.02□□□□□ -1.28
LCA5-201ENST00000369846 UBL5Q9BZL1 73 aa7.02□□□□□ -1.28
LCA5-201ENST00000369846 ZNF106Q9H2Y7 1883 aaKnown RBP7.02□□□□□ -1.29
LCA5-201ENST00000369846 LGALS9BQ3B8N2 356 aa7.02□□□□□ -1.29
LCA5-201ENST00000369846 ASPHD1Q5U4P2 390 aa7.02□□□□□ -1.29
LCA5-201ENST00000369846 TMEM42Q69YG0 159 aa7.02□□□□□ -1.29
LCA5-201ENST00000369846 LGALS9CQ6DKI2 356 aa7.02□□□□□ -1.29
LCA5-201ENST00000369846 PRIMA1Q86XR5 153 aa7.02□□□□□ -1.29
LCA5-201ENST00000369846 DPH3Q96FX2 82 aa7.02□□□□□ -1.29
LCA5-201ENST00000369846 MYMXA0A1B0GTQ4 84 aa7.02□□□□□ -1.29
LCA5-201ENST00000369846 SP9P0CG40 484 aa7.02□□□□□ -1.29
LCA5-201ENST00000369846 FOXF2Q12947 444 aa7.02□□□□□ -1.29
LCA5-201ENST00000369846 UTF1Q5T230 341 aa7.02□□□□□ -1.29
LCA5-201ENST00000369846 CLEC19AQ6UXS0 136 aa7.02□□□□□ -1.29
LCA5-201ENST00000369846 SSC4DQ8WTU2 575 aa7.02□□□□□ -1.29
LCA5-201ENST00000369846 TIMM21Q9BVV7 248 aa7.02□□□□□ -1.29
LCA5-201ENST00000369846 FAM208BQ5VWN6 2430 aa7.02□□□□□ -1.29
LCA5-201ENST00000369846 TINCRA0A1B0GVN0 87 aa7.02□□□□□ -1.29
LCA5-201ENST00000369846 C16orf97H3BN30 126 aa7.02□□□□□ -1.29
LCA5-201ENST00000369846 RBX1P62877 108 aa7.02□□□□□ -1.29
LCA5-201ENST00000369846 ZNF726P1Q15940 193 aa7.02□□□□□ -1.29
LCA5-201ENST00000369846 TRAV3A0A0B4J244 114 aa7.01□□□□□ -1.29
LCA5-201ENST00000369846 PRB2P02812 416 aaPredicted RBP7.01□□□□□ -1.29
LCA5-201ENST00000369846 MLANAQ16655 118 aa7.01□□□□□ -1.29
LCA5-201ENST00000369846 SPANXDQ9BXN6 97 aa7.01□□□□□ -1.29
LCA5-201ENST00000369846 DKK2Q9UBU2 259 aa7.01□□□□□ -1.29
LCA5-201ENST00000369846 V9GYV3 84 aa7.01□□□□□ -1.29
LCA5-201ENST00000369846 ANAPC1Q9H1A4 1944 aa7.01□□□□□ -1.29
LCA5-201ENST00000369846 SH2D1AO60880 128 aa7.01□□□□□ -1.29
LCA5-201ENST00000369846 C8orf46Q8TAG6 207 aa7.01□□□□□ -1.29
LCA5-201ENST00000369846 DENND4CQ5VZ89 1909 aa7.01□□□□□ -1.29
LCA5-201ENST00000369846 C15orf62A8K5M9 175 aa7.01□□□□□ -1.29
LCA5-201ENST00000369846 NPYP01303 97 aa7.01□□□□□ -1.29
LCA5-201ENST00000369846 TRGV3P03979 118 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms