RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 ZNF688P0C7X2 276 aa9.48□□□□□ -0.89
EFNA1-201ENST00000368406 ARL14EPLP0DKL9 152 aa9.48□□□□□ -0.89
EFNA1-201ENST00000368406 RAB5CP51148 216 aa9.48□□□□□ -0.89
EFNA1-201ENST00000368406 GUK1Q16774 197 aa9.48□□□□□ -0.89
EFNA1-201ENST00000368406 DEFB121Q5J5C9 76 aa9.48□□□□□ -0.89
EFNA1-201ENST00000368406 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.48□□□□□ -0.89
EFNA1-201ENST00000368406 DPPA3Q6W0C5 159 aa9.48□□□□□ -0.89
EFNA1-201ENST00000368406 PQLC2Q6ZP29 291 aa9.48□□□□□ -0.89
EFNA1-201ENST00000368406 LINC00052Q96N35 136 aa9.48□□□□□ -0.89
EFNA1-201ENST00000368406 MAP1LC3BQ9GZQ8 125 aa9.48□□□□□ -0.89
EFNA1-201ENST00000368406 UBQLN2Q9UHD9 624 aa9.48□□□□□ -0.89
EFNA1-201ENST00000368406 SMAD5-AS1Q9Y6J3 95 aa9.48□□□□□ -0.89
EFNA1-201ENST00000368406 OR11H12B2RN74 326 aa9.47□□□□□ -0.89
EFNA1-201ENST00000368406 K7EQG2 157 aa9.47□□□□□ -0.89
EFNA1-201ENST00000368406 HIST1H1EP10412 219 aaKnown RBP9.47□□□□□ -0.89
EFNA1-201ENST00000368406 PSMB3P49720 205 aa9.47□□□□□ -0.89
EFNA1-201ENST00000368406 FHITP49789 147 aa9.47□□□□□ -0.89
EFNA1-201ENST00000368406 CMC4P56277 68 aaPredicted RBP9.47□□□□□ -0.89
EFNA1-201ENST00000368406 PSMG4Q5JS54 123 aa9.47□□□□□ -0.89
EFNA1-201ENST00000368406 FAM74A1Q5RGS3 127 aa9.47□□□□□ -0.89
EFNA1-201ENST00000368406 DCANP1Q8TF63 244 aa9.47□□□□□ -0.89
EFNA1-201ENST00000368406 RNF141Q8WVD5 230 aa9.47□□□□□ -0.89
EFNA1-201ENST00000368406 FAM167A-AS1Q96KT0 104 aa9.47□□□□□ -0.89
EFNA1-201ENST00000368406 SLC50A1Q9BRV3 221 aa9.47□□□□□ -0.89
EFNA1-201ENST00000368406 HRH4Q9H3N8 390 aa9.47□□□□□ -0.89
EFNA1-201ENST00000368406 A0A1B0GV50 99 aa9.46□□□□□ -0.9
EFNA1-201ENST00000368406 H3BQ15 152 aa9.46□□□□□ -0.9
EFNA1-201ENST00000368406 TEX46H3BTG2 121 aa9.46□□□□□ -0.9
EFNA1-201ENST00000368406 ISLRO14498 428 aa9.46□□□□□ -0.9
EFNA1-201ENST00000368406 CD7P09564 240 aa9.46□□□□□ -0.9
EFNA1-201ENST00000368406 STAG3L2P0CL84 134 aa9.46□□□□□ -0.9
EFNA1-201ENST00000368406 STAG3L3P0CL85 134 aa9.46□□□□□ -0.9
EFNA1-201ENST00000368406 IGLC2P0DOY2 106 aa9.46□□□□□ -0.9
EFNA1-201ENST00000368406 SULT1A2P50226 295 aa9.46□□□□□ -0.9
EFNA1-201ENST00000368406 FGF8P55075 233 aaPredicted RBP9.46□□□□□ -0.9
EFNA1-201ENST00000368406 SSX7Q7RTT5 188 aa9.46□□□□□ -0.9
EFNA1-201ENST00000368406 SFT2D1Q8WV19 159 aa9.46□□□□□ -0.9
EFNA1-201ENST00000368406 AAMDCQ9H7C9 122 aa9.46□□□□□ -0.9
EFNA1-201ENST00000368406 ZNF705EA8MWA4 302 aaPredicted RBP9.45□□□□□ -0.9
EFNA1-201ENST00000368406 MRPS12O15235 138 aaKnown RBP9.45□□□□□ -0.9
EFNA1-201ENST00000368406 H2AFB1P0C5Y9 115 aa9.45□□□□□ -0.9
EFNA1-201ENST00000368406 NBEAP1P0C6P0 100 aa9.45□□□□□ -0.9
EFNA1-201ENST00000368406 GCHFRP30047 84 aa9.45□□□□□ -0.9
EFNA1-201ENST00000368406 DEFB131AP59861 70 aa9.45□□□□□ -0.9
EFNA1-201ENST00000368406 PSG9Q00887 426 aa9.45□□□□□ -0.9
EFNA1-201ENST00000368406 ZNF726P1Q15940 193 aa9.45□□□□□ -0.9
EFNA1-201ENST00000368406 IGFL4Q6B9Z1 124 aa9.45□□□□□ -0.9
EFNA1-201ENST00000368406 FAM24BQ8N5W8 94 aa9.45□□□□□ -0.9
EFNA1-201ENST00000368406 FXYD5Q96DB9 178 aa9.45□□□□□ -0.9
EFNA1-201ENST00000368406 C17orf77Q96MU5 243 aa9.45□□□□□ -0.9
EFNA1-201ENST00000368406 MAP6D1Q9H9H5 199 aa9.45□□□□□ -0.9
EFNA1-201ENST00000368406 TMEM167BQ9NRX6 74 aa9.45□□□□□ -0.9
EFNA1-201ENST00000368406 ZNF586Q9NXT0 402 aa9.45□□□□□ -0.9
EFNA1-201ENST00000368406 TRBV19A0A075B6N1 114 aa9.44□□□□□ -0.9
EFNA1-201ENST00000368406 SLC17A3O00476 420 aa9.44□□□□□ -0.9
EFNA1-201ENST00000368406 PDE6HQ13956 83 aa9.44□□□□□ -0.9
EFNA1-201ENST00000368406 RNF182Q8N6D2 247 aa9.44□□□□□ -0.9
EFNA1-201ENST00000368406 ZNF738Q8NE65 137 aa9.44□□□□□ -0.9
EFNA1-201ENST00000368406 TUBA4BQ9H853 241 aa9.44□□□□□ -0.9
EFNA1-201ENST00000368406 PLA2G2EQ9NZK7 142 aa9.44□□□□□ -0.9
EFNA1-201ENST00000368406 SOCS3O14543 225 aa9.43□□□□□ -0.9
EFNA1-201ENST00000368406 IFNA7P01567 189 aa9.43□□□□□ -0.9
EFNA1-201ENST00000368406 RANP62826 216 aaKnown RBP9.43□□□□□ -0.9
EFNA1-201ENST00000368406 COL7A1Q02388 2944 aa9.43□□□□□ -0.9
EFNA1-201ENST00000368406 ODF3L2Q3SX64 289 aa9.43□□□□□ -0.9
EFNA1-201ENST00000368406 APRG1Q8IVJ8 170 aa9.43□□□□□ -0.9
EFNA1-201ENST00000368406 Q8N1Y9 231 aa9.43□□□□□ -0.9
EFNA1-201ENST00000368406 ZNF503Q96F45 646 aa9.43□□□□□ -0.9
EFNA1-201ENST00000368406 B9D2Q9BPU9 175 aa9.43□□□□□ -0.9
EFNA1-201ENST00000368406 WFDC10AQ9H1F0 79 aa9.43□□□□□ -0.9
EFNA1-201ENST00000368406 ZNF331Q9NQX6 463 aaPredicted RBP9.43□□□□□ -0.9
EFNA1-201ENST00000368406 ZNF253O75346 499 aa9.42□□□□□ -0.9
EFNA1-201ENST00000368406 HBE1P02100 147 aa9.42□□□□□ -0.9
EFNA1-201ENST00000368406 DEFB125Q8N687 156 aa9.42□□□□□ -0.9
EFNA1-201ENST00000368406 SRD5A3Q9H8P0 318 aa9.42□□□□□ -0.9
EFNA1-201ENST00000368406 CLEC5AQ9NY25 188 aa9.42□□□□□ -0.9
EFNA1-201ENST00000368406 TRAV8-2A0A0B4J237 113 aa9.41□□□□□ -0.9
EFNA1-201ENST00000368406 A8MZ25 164 aa9.41□□□□□ -0.9
EFNA1-201ENST00000368406 HLA-DMBP28068 263 aa9.41□□□□□ -0.9
EFNA1-201ENST00000368406 CSN1S1P47710 185 aa9.41□□□□□ -0.9
EFNA1-201ENST00000368406 UBE2G2P60604 165 aa9.41□□□□□ -0.9
EFNA1-201ENST00000368406 BLOC1S1P78537 153 aa9.41□□□□□ -0.9
EFNA1-201ENST00000368406 ICAM4Q14773 271 aa9.41□□□□□ -0.9
EFNA1-201ENST00000368406 EBLN2Q6P2I7 272 aa9.41□□□□□ -0.9
EFNA1-201ENST00000368406 TEX261Q6UWH6 196 aa9.41□□□□□ -0.9
EFNA1-201ENST00000368406 STHQ8IWL8 128 aa9.41□□□□□ -0.9
EFNA1-201ENST00000368406 EXOC3-AS1Q8N2X6 119 aa9.41□□□□□ -0.9
EFNA1-201ENST00000368406 Q9H3A6 140 aa9.41□□□□□ -0.9
EFNA1-201ENST00000368406 TMPRSS5Q9H3S3 457 aa9.41□□□□□ -0.9
EFNA1-201ENST00000368406 RPH3ALQ9UNE2 315 aa9.41□□□□□ -0.9
EFNA1-201ENST00000368406 KNCNA6PVL3 124 aa9.4□□□□□ -0.9
EFNA1-201ENST00000368406 ZNF124Q15973 351 aa9.4□□□□□ -0.9
EFNA1-201ENST00000368406 PSG3Q16557 428 aa9.4□□□□□ -0.9
EFNA1-201ENST00000368406 ACTL10Q5JWF8 245 aa9.4□□□□□ -0.9
EFNA1-201ENST00000368406 CMTM2Q8TAZ6 248 aa9.4□□□□□ -0.9
EFNA1-201ENST00000368406 MBD3L1Q8WWY6 194 aa9.4□□□□□ -0.9
EFNA1-201ENST00000368406 SAT2Q96F10 170 aaPredicted RBP9.4□□□□□ -0.9
EFNA1-201ENST00000368406 C20orf173Q96LM9 149 aa9.4□□□□□ -0.9
EFNA1-201ENST00000368406 FAM110AQ9BQ89 295 aa9.4□□□□□ -0.9
EFNA1-201ENST00000368406 PRELID1Q9Y255 219 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 433.1 ms