RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 B2MP61769 119 aa13.98□□□□□ -0.17
LMNA-204ENST00000368298 BTN1A1Q13410 526 aa13.98□□□□□ -0.17
LMNA-204ENST00000368298 DEFB121Q5J5C9 76 aa13.98□□□□□ -0.17
LMNA-204ENST00000368298 STPG3Q8N7X2 389 aa13.98□□□□□ -0.17
LMNA-204ENST00000368298 GLMPQ8WWB7 406 aa13.98□□□□□ -0.17
LMNA-204ENST00000368298 TRAV2A0A0B4J234 112 aa13.97□□□□□ -0.17
LMNA-204ENST00000368298 IGHV3-66A0A0C4DH42 116 aa13.97□□□□□ -0.17
LMNA-204ENST00000368298 CD7P09564 240 aa13.97□□□□□ -0.17
LMNA-204ENST00000368298 PMS2P11Q13670 270 aa13.97□□□□□ -0.17
LMNA-204ENST00000368298 C1orf194Q5T5A4 169 aa13.97□□□□□ -0.17
LMNA-204ENST00000368298 FAM110AQ9BQ89 295 aa13.97□□□□□ -0.17
LMNA-204ENST00000368298 C19orf73Q9NVV2 129 aa13.97□□□□□ -0.17
LMNA-204ENST00000368298 A0A1W2PPV4 95 aa13.96□□□□□ -0.17
LMNA-204ENST00000368298 OR4C46A6NHA9 309 aa13.96□□□□□ -0.17
LMNA-204ENST00000368298 CD81P60033 236 aa13.96□□□□□ -0.17
LMNA-204ENST00000368298 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.96□□□□□ -0.17
LMNA-204ENST00000368298 TMPRSS5Q9H3S3 457 aa13.96□□□□□ -0.17
LMNA-204ENST00000368298 HELTA6NFD8 242 aa13.95□□□□□ -0.18
LMNA-204ENST00000368298 LINC00869P0C866 280 aa13.95□□□□□ -0.18
LMNA-204ENST00000368298 PRR20EP86478 221 aa13.95□□□□□ -0.18
LMNA-204ENST00000368298 PRR20CP86479 221 aa13.95□□□□□ -0.18
LMNA-204ENST00000368298 PRR20DP86480 221 aa13.95□□□□□ -0.18
LMNA-204ENST00000368298 PRR20BP86481 221 aa13.95□□□□□ -0.18
LMNA-204ENST00000368298 PRR20AP86496 221 aa13.95□□□□□ -0.18
LMNA-204ENST00000368298 S100A7P31151 101 aa13.94□□□□□ -0.18
LMNA-204ENST00000368298 PAFAH1B2P68402 229 aa13.94□□□□□ -0.18
LMNA-204ENST00000368298 SOHLH1Q5JUK2 328 aa13.94□□□□□ -0.18
LMNA-204ENST00000368298 IQCF2Q8IXL9 164 aa13.94□□□□□ -0.18
LMNA-204ENST00000368298 CLRN3Q8NCR9 226 aa13.94□□□□□ -0.18
LMNA-204ENST00000368298 MANBALQ9NQG1 85 aa13.94□□□□□ -0.18
LMNA-204ENST00000368298 VAX2Q9UIW0 290 aa13.94□□□□□ -0.18
LMNA-204ENST00000368298 IGHV4-30-4P0DP06 118 aa13.93□□□□□ -0.18
LMNA-204ENST00000368298 ORM2P19652 201 aa13.93□□□□□ -0.18
LMNA-204ENST00000368298 MS4A6AQ9H2W1 248 aa13.93□□□□□ -0.18
LMNA-204ENST00000368298 TGP01266 2768 aa13.93□□□□□ -0.18
LMNA-204ENST00000368298 OR11H12B2RN74 326 aa13.93□□□□□ -0.18
LMNA-204ENST00000368298 DNASE2O00115 360 aaPredicted RBP13.93□□□□□ -0.18
LMNA-204ENST00000368298 HYPMO75409 117 aa13.93□□□□□ -0.18
LMNA-204ENST00000368298 TAGLN2P37802 199 aaKnown RBP13.93□□□□□ -0.18
LMNA-204ENST00000368298 PSMB3P49720 205 aa13.93□□□□□ -0.18
LMNA-204ENST00000368298 CEBPGP53567 150 aa13.93□□□□□ -0.18
LMNA-204ENST00000368298 CMC4P56277 68 aaPredicted RBP13.93□□□□□ -0.18
LMNA-204ENST00000368298 RHOBP62745 196 aa13.93□□□□□ -0.18
LMNA-204ENST00000368298 CYB561D1Q8N8Q1 229 aa13.93□□□□□ -0.18
LMNA-204ENST00000368298 OR1B1Q8NGR6 318 aa13.93□□□□□ -0.18
LMNA-204ENST00000368298 SUN5Q8TC36 379 aa13.93□□□□□ -0.18
LMNA-204ENST00000368298 B9D2Q9BPU9 175 aa13.93□□□□□ -0.18
LMNA-204ENST00000368298 ZNF98A6NK75 572 aa13.92□□□□□ -0.18
LMNA-204ENST00000368298 FAM74A7A6NL05 159 aa13.92□□□□□ -0.18
LMNA-204ENST00000368298 RPL11P62913 178 aaKnown RBP13.92□□□□□ -0.18
LMNA-204ENST00000368298 FAM74A3Q4VXF1 159 aa13.92□□□□□ -0.18
LMNA-204ENST00000368298 PATE2Q6UY27 113 aa13.92□□□□□ -0.18
LMNA-204ENST00000368298 SIGLEC15Q6ZMC9 328 aa13.92□□□□□ -0.18
LMNA-204ENST00000368298 DCANP1Q8TF63 244 aa13.92□□□□□ -0.18
LMNA-204ENST00000368298 H3BRN7 92 aa13.91□□□□□ -0.18
LMNA-204ENST00000368298 K7EQG2 157 aa13.91□□□□□ -0.18
LMNA-204ENST00000368298 STAG3L2P0CL84 134 aa13.91□□□□□ -0.18
LMNA-204ENST00000368298 STAG3L3P0CL85 134 aa13.91□□□□□ -0.18
LMNA-204ENST00000368298 ODF3L2Q3SX64 289 aa13.91□□□□□ -0.18
LMNA-204ENST00000368298 SPATA31B1PQ5VZV4 182 aa13.91□□□□□ -0.18
LMNA-204ENST00000368298 S100A7AQ86SG5 101 aa13.91□□□□□ -0.18
LMNA-204ENST00000368298 GBGT1Q8N5D6 347 aa13.91□□□□□ -0.18
LMNA-204ENST00000368298 GATAD1Q8WUU5 269 aa13.91□□□□□ -0.18
LMNA-204ENST00000368298 SHANK2-AS3Q9BTD1 123 aa13.91□□□□□ -0.18
LMNA-204ENST00000368298 SLC25A39Q9BZJ4 359 aaPredicted RBP13.91□□□□□ -0.18
LMNA-204ENST00000368298 HIGD1AQ9Y241 93 aa13.91□□□□□ -0.18
LMNA-204ENST00000368298 TMA7Q9Y2S6 64 aaKnown RBP13.91□□□□□ -0.18
LMNA-204ENST00000368298 IGKV3-7A0A075B6H7 116 aa13.9□□□□□ -0.18
LMNA-204ENST00000368298 ELOA3CA0A087WX78 387 aaPredicted RBP13.9□□□□□ -0.18
LMNA-204ENST00000368298 CXorf1O96002 111 aa13.9□□□□□ -0.18
LMNA-204ENST00000368298 FRMD6-AS1P0C7T7 363 aa13.9□□□□□ -0.18
LMNA-204ENST00000368298 ARL14EPLP0DKL9 152 aa13.9□□□□□ -0.18
LMNA-204ENST00000368298 LINC00322Q6ZN03 302 aaPredicted RBP13.9□□□□□ -0.18
LMNA-204ENST00000368298 DEFB125Q8N687 156 aa13.9□□□□□ -0.18
LMNA-204ENST00000368298 GPR82Q96P67 336 aa13.9□□□□□ -0.18
LMNA-204ENST00000368298 NRN1Q9NPD7 142 aa13.9□□□□□ -0.18
LMNA-204ENST00000368298 DOK5Q9P104 306 aa13.9□□□□□ -0.18
LMNA-204ENST00000368298 M0R036 132 aa13.89□□□□□ -0.19
LMNA-204ENST00000368298 OR5G3P0C626 314 aa13.89□□□□□ -0.19
LMNA-204ENST00000368298 OR8I2Q8N0Y5 310 aa13.89□□□□□ -0.19
LMNA-204ENST00000368298 TMEM37Q8WXS4 190 aa13.89□□□□□ -0.19
LMNA-204ENST00000368298 SEPSECSQ9HD40 501 aaKnown RBP13.89□□□□□ -0.19
LMNA-204ENST00000368298 RNF24Q9Y225 148 aa13.89□□□□□ -0.19
LMNA-204ENST00000368298 PAGE4O60829 102 aa13.88□□□□□ -0.19
LMNA-204ENST00000368298 NDUFS6O75380 124 aaKnown RBP13.88□□□□□ -0.19
LMNA-204ENST00000368298 TFPI2P48307 235 aa13.88□□□□□ -0.19
LMNA-204ENST00000368298 MEF2BQ02080 365 aaPredicted RBP13.88□□□□□ -0.19
LMNA-204ENST00000368298 STXBP6Q8NFX7 210 aa13.88□□□□□ -0.19
LMNA-204ENST00000368298 WFDC10AQ9H1F0 79 aa13.88□□□□□ -0.19
LMNA-204ENST00000368298 FUT9Q9Y231 359 aa13.88□□□□□ -0.19
LMNA-204ENST00000368298 FAM78BQ5VT40 261 aa13.87□□□□□ -0.19
LMNA-204ENST00000368298 MIR17HGQ75NE6 70 aa13.87□□□□□ -0.19
LMNA-204ENST00000368298 WFDC3Q8IUB2 231 aa13.87□□□□□ -0.19
LMNA-204ENST00000368298 UHRF2Q96PU4 802 aa13.87□□□□□ -0.19
LMNA-204ENST00000368298 TUBA4BQ9H853 241 aa13.87□□□□□ -0.19
LMNA-204ENST00000368298 DNAJC4Q9NNZ3 241 aa13.87□□□□□ -0.19
LMNA-204ENST00000368298 H3BQ15 152 aa13.87□□□□□ -0.19
LMNA-204ENST00000368298 COX7A2P2O60397 106 aa13.87□□□□□ -0.19
LMNA-204ENST00000368298 GCHFRP30047 84 aa13.87□□□□□ -0.19
LMNA-204ENST00000368298 TMEM88Q6PEY1 159 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms