RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 FAM27E3Q08E93 113 aa7.3□□□□□ -1.24
SYNE1-209ENST00000367257 LY6G5BQ8NDX9 201 aa7.3□□□□□ -1.24
SYNE1-209ENST00000367257 TRAV12-3A0A0B4J271 114 aa7.3□□□□□ -1.24
SYNE1-209ENST00000367257 K7EMI3 77 aa7.3□□□□□ -1.24
SYNE1-209ENST00000367257 TMEM258P61165 79 aa7.3□□□□□ -1.24
SYNE1-209ENST00000367257 QRFPP83859 136 aa7.3□□□□□ -1.24
SYNE1-209ENST00000367257 LINC01545Q5VT33 79 aa7.3□□□□□ -1.24
SYNE1-209ENST00000367257 SPTBN2O15020 2390 aa7.3□□□□□ -1.24
SYNE1-209ENST00000367257 IGHV1-46P01743 117 aa7.3□□□□□ -1.24
SYNE1-209ENST00000367257 IGHV1-8P0DP01 117 aa7.3□□□□□ -1.24
SYNE1-209ENST00000367257 PYYP10082 97 aa7.3□□□□□ -1.24
SYNE1-209ENST00000367257 RNF183Q96D59 192 aa7.3□□□□□ -1.24
SYNE1-209ENST00000367257 GBF1Q92538 1859 aa7.29□□□□□ -1.24
SYNE1-209ENST00000367257 VWC2LB2RUY7 222 aa7.29□□□□□ -1.24
SYNE1-209ENST00000367257 H3BMG7 143 aa7.29□□□□□ -1.24
SYNE1-209ENST00000367257 GATA3P23771 443 aa7.29□□□□□ -1.24
SYNE1-209ENST00000367257 FOXF2Q12947 444 aa7.29□□□□□ -1.24
SYNE1-209ENST00000367257 GTSCR1Q86UQ5 136 aa7.29□□□□□ -1.24
SYNE1-209ENST00000367257 DPH3Q96FX2 82 aa7.29□□□□□ -1.24
SYNE1-209ENST00000367257 IGKV3OR2-268A0A0C4DH90 116 aa7.29□□□□□ -1.24
SYNE1-209ENST00000367257 NPIPB5A8MRT5 1133 aa7.29□□□□□ -1.24
SYNE1-209ENST00000367257 F8WEM9 126 aa7.29□□□□□ -1.24
SYNE1-209ENST00000367257 SIVA1O15304 175 aa7.29□□□□□ -1.24
SYNE1-209ENST00000367257 EFNA4P52798 201 aa7.29□□□□□ -1.24
SYNE1-209ENST00000367257 KLRD1Q13241 179 aa7.29□□□□□ -1.24
SYNE1-209ENST00000367257 TRPT1Q86TN4 253 aaKnown RBP7.29□□□□□ -1.24
SYNE1-209ENST00000367257 YPEL3P61236 119 aaPredicted RBP7.29□□□□□ -1.24
SYNE1-209ENST00000367257 RPP25LQ8N5L8 163 aaKnown RBP7.29□□□□□ -1.24
SYNE1-209ENST00000367257 C15orf53Q8NAA6 179 aa7.29□□□□□ -1.24
SYNE1-209ENST00000367257 VSIRQ9H7M9 311 aa7.29□□□□□ -1.24
SYNE1-209ENST00000367257 D6R8Y8 96 aa7.28□□□□□ -1.24
SYNE1-209ENST00000367257 TIMM23O14925 209 aa7.28□□□□□ -1.24
SYNE1-209ENST00000367257 NUP35Q8NFH5 326 aa7.28□□□□□ -1.24
SYNE1-209ENST00000367257 SSC4DQ8WTU2 575 aa7.28□□□□□ -1.24
SYNE1-209ENST00000367257 JPT2Q9H910 190 aa7.28□□□□□ -1.24
SYNE1-209ENST00000367257 UNC80Q8N2C7 3258 aa7.28□□□□□ -1.24
SYNE1-209ENST00000367257 IGHV1-3A0A0C4DH29 117 aa7.28□□□□□ -1.24
SYNE1-209ENST00000367257 IGHV1-24A0A0C4DH33 117 aa7.28□□□□□ -1.24
SYNE1-209ENST00000367257 H0YJW9 148 aa7.28□□□□□ -1.24
SYNE1-209ENST00000367257 INSP01308 110 aa7.28□□□□□ -1.24
SYNE1-209ENST00000367257 MRPL23Q16540 153 aaKnown RBP7.28□□□□□ -1.24
SYNE1-209ENST00000367257 LINC01560Q8TB33 94 aa7.28□□□□□ -1.24
SYNE1-209ENST00000367257 RNF166Q96A37 237 aaPredicted RBP7.28□□□□□ -1.24
SYNE1-209ENST00000367257 PRSS46E5RG02 174 aa7.28□□□□□ -1.24
SYNE1-209ENST00000367257 CTSBP07858 339 aa7.28□□□□□ -1.24
SYNE1-209ENST00000367257 C5orf64Q2M2E5 130 aa7.28□□□□□ -1.24
SYNE1-209ENST00000367257 Q86TA4 180 aa7.28□□□□□ -1.24
SYNE1-209ENST00000367257 SHANK2-AS3Q9BTD1 123 aa7.28□□□□□ -1.24
SYNE1-209ENST00000367257 SH2D1AO60880 128 aa7.28□□□□□ -1.24
SYNE1-209ENST00000367257 IGKV1-5P01602 117 aa7.28□□□□□ -1.24
SYNE1-209ENST00000367257 GATA2P23769 480 aaPredicted RBP7.28□□□□□ -1.24
SYNE1-209ENST00000367257 LYZL1Q6UWQ5 148 aa7.28□□□□□ -1.24
SYNE1-209ENST00000367257 RCHY1Q96PM5 261 aa7.28□□□□□ -1.24
SYNE1-209ENST00000367257 IGKV1-12A0A0C4DH73 117 aa7.27□□□□□ -1.24
SYNE1-209ENST00000367257 PRSS29PA6NIE9 313 aa7.27□□□□□ -1.24
SYNE1-209ENST00000367257 TMEM178BH3BS89 294 aa7.27□□□□□ -1.24
SYNE1-209ENST00000367257 ETV2O00321 342 aaPredicted RBP7.27□□□□□ -1.24
SYNE1-209ENST00000367257 IGKV1D-12P01611 117 aa7.27□□□□□ -1.24
SYNE1-209ENST00000367257 LINC00158P58513 81 aa7.27□□□□□ -1.24
SYNE1-209ENST00000367257 TMEM14CQ9P0S9 112 aa7.27□□□□□ -1.24
SYNE1-209ENST00000367257 PKIGQ9Y2B9 76 aa7.27□□□□□ -1.24
SYNE1-209ENST00000367257 TRIP12Q14669 1992 aaPredicted RBP7.27□□□□□ -1.24
SYNE1-209ENST00000367257 SVILO95425 2214 aa7.27□□□□□ -1.25
SYNE1-209ENST00000367257 CCL3L1P16619 93 aa7.27□□□□□ -1.25
SYNE1-209ENST00000367257 GGNQ86UU5 652 aa7.27□□□□□ -1.25
SYNE1-209ENST00000367257 C18orf32Q8TCD1 76 aa7.27□□□□□ -1.25
SYNE1-209ENST00000367257 TAX1BP3O14907 124 aa7.27□□□□□ -1.25
SYNE1-209ENST00000367257 CDK2AP2O75956 126 aa7.27□□□□□ -1.25
SYNE1-209ENST00000367257 IGHV3-48P01763 117 aa7.27□□□□□ -1.25
SYNE1-209ENST00000367257 ERCC8Q13216 396 aa7.27□□□□□ -1.25
SYNE1-209ENST00000367257 Q6P435 159 aa7.27□□□□□ -1.25
SYNE1-209ENST00000367257 IGKV3-20P01619 116 aa7.27□□□□□ -1.25
SYNE1-209ENST00000367257 ZNF329Q86UD4 541 aa7.27□□□□□ -1.25
SYNE1-209ENST00000367257 CHCHD5Q9BSY4 110 aa7.27□□□□□ -1.25
SYNE1-209ENST00000367257 GREB1Q4ZG55 1949 aa7.27□□□□□ -1.25
SYNE1-209ENST00000367257 OBSL1O75147 1896 aa7.27□□□□□ -1.25
SYNE1-209ENST00000367257 KIF26AQ9ULI4 1882 aaPredicted RBP7.27□□□□□ -1.25
SYNE1-209ENST00000367257 MBD3L4A6NDZ8 208 aaPredicted RBP7.26□□□□□ -1.25
SYNE1-209ENST00000367257 MBD3L3A6NE82 208 aaPredicted RBP7.26□□□□□ -1.25
SYNE1-209ENST00000367257 MBD3L5A6NJ08 208 aaPredicted RBP7.26□□□□□ -1.25
SYNE1-209ENST00000367257 H3BQ85 93 aa7.26□□□□□ -1.25
SYNE1-209ENST00000367257 SLC25A16P16260 332 aa7.26□□□□□ -1.25
SYNE1-209ENST00000367257 ZNF474Q6S9Z5 364 aaPredicted RBP7.26□□□□□ -1.25
SYNE1-209ENST00000367257 ZCCHC24Q8N2G6 241 aaKnown RBP7.26□□□□□ -1.25
SYNE1-209ENST00000367257 MBD3L2Q8NHZ7 208 aaPredicted RBP7.26□□□□□ -1.25
SYNE1-209ENST00000367257 TIMM21Q9BVV7 248 aa7.26□□□□□ -1.25
SYNE1-209ENST00000367257 METRNQ9UJH8 293 aa7.26□□□□□ -1.25
SYNE1-209ENST00000367257 IGHG3P01860 377 aa7.26□□□□□ -1.25
SYNE1-209ENST00000367257 Q8N8P6 123 aa7.26□□□□□ -1.25
SYNE1-209ENST00000367257 Q8TCH9 128 aa7.26□□□□□ -1.25
SYNE1-209ENST00000367257 SDK2Q58EX2 2172 aa7.26□□□□□ -1.25
SYNE1-209ENST00000367257 C5orf42Q9H799 3197 aa7.26□□□□□ -1.25
SYNE1-209ENST00000367257 IGHV3-23P01764 117 aa7.26□□□□□ -1.25
SYNE1-209ENST00000367257 SS18Q15532 418 aa7.26□□□□□ -1.25
SYNE1-209ENST00000367257 LGALS9BQ3B8N2 356 aa7.26□□□□□ -1.25
SYNE1-209ENST00000367257 LGALS9CQ6DKI2 356 aa7.26□□□□□ -1.25
SYNE1-209ENST00000367257 SRD5A1P18405 259 aa7.26□□□□□ -1.25
SYNE1-209ENST00000367257 LMO1P25800 156 aa7.26□□□□□ -1.25
SYNE1-209ENST00000367257 AMN1Q8IY45 258 aa7.26□□□□□ -1.25
SYNE1-209ENST00000367257 SIGLEC8Q9NYZ4 499 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms