RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 ZNF846Q147U1 533 aa10.51□□□□□ -0.73
CTSD-202ENST00000367196 PSG3Q16557 428 aa10.51□□□□□ -0.73
CTSD-202ENST00000367196 BPIFA4PQ86YQ2 179 aa10.51□□□□□ -0.73
CTSD-202ENST00000367196 BAP18Q8IXM2 172 aa10.51□□□□□ -0.73
CTSD-202ENST00000367196 ZBTB8BQ8NAP8 495 aaPredicted RBP10.51□□□□□ -0.73
CTSD-202ENST00000367196 MITD1Q8WV92 249 aa10.51□□□□□ -0.73
CTSD-202ENST00000367196 C16orf74Q96GX8 76 aa10.51□□□□□ -0.73
CTSD-202ENST00000367196 GSKIPQ9P0R6 139 aa10.51□□□□□ -0.73
CTSD-202ENST00000367196 A0A1B0GVY2 172 aa10.5□□□□□ -0.73
CTSD-202ENST00000367196 ZNF705GA8MUZ8 300 aaPredicted RBP10.5□□□□□ -0.73
CTSD-202ENST00000367196 L7N2F9 121 aa10.5□□□□□ -0.73
CTSD-202ENST00000367196 COX7A2P2O60397 106 aa10.5□□□□□ -0.73
CTSD-202ENST00000367196 TAS2R60P59551 318 aa10.5□□□□□ -0.73
CTSD-202ENST00000367196 VAMP2P63027 116 aa10.5□□□□□ -0.73
CTSD-202ENST00000367196 SLC38A11Q08AI6 406 aa10.5□□□□□ -0.73
CTSD-202ENST00000367196 RAB31Q13636 194 aa10.5□□□□□ -0.73
CTSD-202ENST00000367196 LINC00305Q7Z4B0 112 aa10.5□□□□□ -0.73
CTSD-202ENST00000367196 LINC01587Q99440 93 aa10.5□□□□□ -0.73
CTSD-202ENST00000367196 ATG101Q9BSB4 218 aa10.5□□□□□ -0.73
CTSD-202ENST00000367196 PLA2G2EQ9NZK7 142 aa10.5□□□□□ -0.73
CTSD-202ENST00000367196 RCL1Q9Y2P8 373 aaKnown RBP10.5□□□□□ -0.73
CTSD-202ENST00000367196 HERC2O95714 4834 aa10.49□□□□□ -0.73
CTSD-202ENST00000367196 IGLV2-18A0A075B6J9 118 aa10.49□□□□□ -0.73
CTSD-202ENST00000367196 TRAV12-2A0A075B6T6 113 aa10.49□□□□□ -0.73
CTSD-202ENST00000367196 AGPAT2O15120 278 aa10.49□□□□□ -0.73
CTSD-202ENST00000367196 RTL8CO15255 209 aa10.49□□□□□ -0.73
CTSD-202ENST00000367196 CCNKO75909 580 aa10.49□□□□□ -0.73
CTSD-202ENST00000367196 ATP5G1P05496 136 aa10.49□□□□□ -0.73
CTSD-202ENST00000367196 DEFB130BP0DP73 79 aa10.49□□□□□ -0.73
CTSD-202ENST00000367196 DEFB130AP0DP74 79 aa10.49□□□□□ -0.73
CTSD-202ENST00000367196 IL7P13232 177 aa10.49□□□□□ -0.73
CTSD-202ENST00000367196 BTCP35070 178 aa10.49□□□□□ -0.73
CTSD-202ENST00000367196 CDKN1BP46527 198 aa10.49□□□□□ -0.73
CTSD-202ENST00000367196 ATP5G3P48201 142 aa10.49□□□□□ -0.73
CTSD-202ENST00000367196 Q6ZR54 194 aa10.49□□□□□ -0.73
CTSD-202ENST00000367196 RPUSD4Q96CM3 377 aaKnown RBP10.49□□□□□ -0.73
CTSD-202ENST00000367196 C20orf144Q9BQM9 153 aa10.49□□□□□ -0.73
CTSD-202ENST00000367196 C20orf85Q9H1P6 137 aa10.49□□□□□ -0.73
CTSD-202ENST00000367196 FAT2Q9NYQ8 4349 aa10.49□□□□□ -0.73
CTSD-202ENST00000367196 MBPP02686 304 aaPredicted RBP10.48□□□□□ -0.73
CTSD-202ENST00000367196 MED14OSP0DP75 135 aa10.48□□□□□ -0.73
CTSD-202ENST00000367196 ZNF493Q6ZR52 646 aa10.48□□□□□ -0.73
CTSD-202ENST00000367196 Q6ZRG5 221 aa10.48□□□□□ -0.73
CTSD-202ENST00000367196 OR10J6PQ8NGY7 276 aa10.48□□□□□ -0.73
CTSD-202ENST00000367196 DNAH2Q9P225 4427 aa10.47□□□□□ -0.73
CTSD-202ENST00000367196 C7orf66A4D0T2 115 aa10.47□□□□□ -0.73
CTSD-202ENST00000367196 H7BYZ3 331 aa10.47□□□□□ -0.73
CTSD-202ENST00000367196 MRPS12O15235 138 aaKnown RBP10.47□□□□□ -0.73
CTSD-202ENST00000367196 HTN1P15515 57 aa10.47□□□□□ -0.73
CTSD-202ENST00000367196 PVALBP20472 110 aaPredicted RBP10.47□□□□□ -0.73
CTSD-202ENST00000367196 C1orf134Q5TEV5 83 aa10.47□□□□□ -0.73
CTSD-202ENST00000367196 C10orf113Q5VZT2 155 aa10.47□□□□□ -0.73
CTSD-202ENST00000367196 PATE2Q6UY27 113 aa10.47□□□□□ -0.73
CTSD-202ENST00000367196 TMEM263Q8WUH6 116 aaKnown RBP10.47□□□□□ -0.73
CTSD-202ENST00000367196 SDHCQ99643 169 aaPredicted RBP10.47□□□□□ -0.73
CTSD-202ENST00000367196 ZNF331Q9NQX6 463 aaPredicted RBP10.47□□□□□ -0.73
CTSD-202ENST00000367196 TIMM8BQ9Y5J9 83 aaPredicted RBP10.47□□□□□ -0.73
CTSD-202ENST00000367196 PXMP4Q9Y6I8 212 aa10.47□□□□□ -0.73
CTSD-202ENST00000367196 NACAE9PAV3 2078 aa10.46□□□□□ -0.73
CTSD-202ENST00000367196 CBY3A6NI87 242 aa10.46□□□□□ -0.73
CTSD-202ENST00000367196 F5H768 121 aa10.46□□□□□ -0.73
CTSD-202ENST00000367196 LYRM1O43325 122 aa10.46□□□□□ -0.73
CTSD-202ENST00000367196 CAMLGP49069 296 aa10.46□□□□□ -0.73
CTSD-202ENST00000367196 BCAP31P51572 246 aa10.46□□□□□ -0.73
CTSD-202ENST00000367196 CAV2P51636 162 aa10.46□□□□□ -0.73
CTSD-202ENST00000367196 GUK1Q16774 197 aa10.46□□□□□ -0.73
CTSD-202ENST00000367196 LINC00299Q6ZSB3 139 aa10.46□□□□□ -0.73
CTSD-202ENST00000367196 OR1L4Q8NGR5 311 aa10.46□□□□□ -0.73
CTSD-202ENST00000367196 PFDN5Q99471 154 aa10.46□□□□□ -0.73
CTSD-202ENST00000367196 FAM25EA8MYX2 175 aa10.45□□□□□ -0.74
CTSD-202ENST00000367196 AZU1P20160 251 aa10.45□□□□□ -0.74
CTSD-202ENST00000367196 CCL18P55774 89 aa10.45□□□□□ -0.74
CTSD-202ENST00000367196 CCDC28AQ8IWP9 274 aa10.45□□□□□ -0.74
CTSD-202ENST00000367196 MGST2Q99735 147 aa10.45□□□□□ -0.74
CTSD-202ENST00000367196 UQCC1Q9NVA1 299 aa10.45□□□□□ -0.74
CTSD-202ENST00000367196 LSM5Q9Y4Y9 91 aaKnown RBP10.45□□□□□ -0.74
CTSD-202ENST00000367196 PKHD1P08F94 4074 aa10.44□□□□□ -0.74
CTSD-202ENST00000367196 PLAC8L1A1L4L8 177 aa10.44□□□□□ -0.74
CTSD-202ENST00000367196 C5orf51A6NDU8 294 aa10.44□□□□□ -0.74
CTSD-202ENST00000367196 NUDT3O95989 172 aa10.44□□□□□ -0.74
CTSD-202ENST00000367196 TCRBP04435 133 aa10.44□□□□□ -0.74
CTSD-202ENST00000367196 PRM2P04554 102 aa10.44□□□□□ -0.74
CTSD-202ENST00000367196 ARL16Q0P5N6 197 aa10.44□□□□□ -0.74
CTSD-202ENST00000367196 OPCMLQ14982 345 aa10.44□□□□□ -0.74
CTSD-202ENST00000367196 STX12Q86Y82 276 aa10.44□□□□□ -0.74
CTSD-202ENST00000367196 C12orf45Q8N5I9 185 aaPredicted RBP10.44□□□□□ -0.74
CTSD-202ENST00000367196 RNASE8Q8TDE3 154 aaKnown RBP10.44□□□□□ -0.74
CTSD-202ENST00000367196 ZNF431Q8TF32 576 aaPredicted RBP10.44□□□□□ -0.74
CTSD-202ENST00000367196 TMEM37Q8WXS4 190 aa10.44□□□□□ -0.74
CTSD-202ENST00000367196 DNAJC4Q9NNZ3 241 aa10.44□□□□□ -0.74
CTSD-202ENST00000367196 KIAA1109Q2LD37 5005 aa10.43□□□□□ -0.74
CTSD-202ENST00000367196 CCSO14618 274 aa10.43□□□□□ -0.74
CTSD-202ENST00000367196 LEPP41159 167 aa10.43□□□□□ -0.74
CTSD-202ENST00000367196 HBG1P69891 147 aa10.43□□□□□ -0.74
CTSD-202ENST00000367196 HBG2P69892 147 aa10.43□□□□□ -0.74
CTSD-202ENST00000367196 CLINT1Q14677 625 aa10.43□□□□□ -0.74
CTSD-202ENST00000367196 NRARPQ7Z6K4 114 aa10.43□□□□□ -0.74
CTSD-202ENST00000367196 KRTAP17-1Q9BYP8 105 aa10.43□□□□□ -0.74
CTSD-202ENST00000367196 NOP10Q9NPE3 64 aaKnown RBP10.43□□□□□ -0.74
CTSD-202ENST00000367196 TRAV6A0A075B6T7 132 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms