RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 ATP5SQ99766 215 aa6.79□□□□□ -1.32
MRPL55-216ENST00000366744 MED28Q9H204 178 aa6.79□□□□□ -1.32
MRPL55-216ENST00000366744 DNAJC4Q9NNZ3 241 aa6.79□□□□□ -1.32
MRPL55-216ENST00000366744 OR5AC2Q9NZP5 309 aa6.79□□□□□ -1.32
MRPL55-216ENST00000366744 ALG5Q9Y673 324 aa6.79□□□□□ -1.32
MRPL55-216ENST00000366744 SMIM9A6NGZ8 99 aa6.78□□□□□ -1.32
MRPL55-216ENST00000366744 C11orf94C9JXX5 98 aa6.78□□□□□ -1.32
MRPL55-216ENST00000366744 F6UB75 175 aa6.78□□□□□ -1.32
MRPL55-216ENST00000366744 MPC2O95563 127 aa6.78□□□□□ -1.32
MRPL55-216ENST00000366744 CNN1P51911 297 aaKnown RBP6.78□□□□□ -1.32
MRPL55-216ENST00000366744 FXYD7P58549 80 aa6.78□□□□□ -1.32
MRPL55-216ENST00000366744 DEFB1P60022 68 aa6.78□□□□□ -1.32
MRPL55-216ENST00000366744 RHOBP62745 196 aa6.78□□□□□ -1.32
MRPL55-216ENST00000366744 PRR20EP86478 221 aa6.78□□□□□ -1.32
MRPL55-216ENST00000366744 PRR20CP86479 221 aa6.78□□□□□ -1.32
MRPL55-216ENST00000366744 PRR20DP86480 221 aa6.78□□□□□ -1.32
MRPL55-216ENST00000366744 PRR20BP86481 221 aa6.78□□□□□ -1.32
MRPL55-216ENST00000366744 PRR20AP86496 221 aa6.78□□□□□ -1.32
MRPL55-216ENST00000366744 NHLH2Q02577 135 aa6.78□□□□□ -1.32
MRPL55-216ENST00000366744 CEMP1Q6PRD7 247 aaPredicted RBP6.78□□□□□ -1.32
MRPL55-216ENST00000366744 Q8NAQ8 132 aa6.78□□□□□ -1.32
MRPL55-216ENST00000366744 OR10J6PQ8NGY7 276 aa6.78□□□□□ -1.32
MRPL55-216ENST00000366744 SCGB1C1Q8TD33 95 aa6.78□□□□□ -1.32
MRPL55-216ENST00000366744 PHLDA1Q8WV24 401 aaPredicted RBP6.78□□□□□ -1.32
MRPL55-216ENST00000366744 HRH4Q9H3N8 390 aa6.78□□□□□ -1.32
MRPL55-216ENST00000366744 MBD2Q9UBB5 411 aa6.78□□□□□ -1.32
MRPL55-216ENST00000366744 RFNGQ9Y644 331 aa6.78□□□□□ -1.32
MRPL55-216ENST00000366744 BOLA2-SMG1P6H3BVE0 249 aa6.77□□□□□ -1.33
MRPL55-216ENST00000366744 HBE1P02100 147 aa6.77□□□□□ -1.33
MRPL55-216ENST00000366744 GIG44P09565 113 aaPredicted RBP6.77□□□□□ -1.33
MRPL55-216ENST00000366744 CXCL3P19876 107 aa6.77□□□□□ -1.33
MRPL55-216ENST00000366744 RPL12P30050 165 aaKnown RBP6.77□□□□□ -1.33
MRPL55-216ENST00000366744 NANOS2P60321 138 aaKnown RBP6.77□□□□□ -1.33
MRPL55-216ENST00000366744 PSG3Q16557 428 aa6.77□□□□□ -1.33
MRPL55-216ENST00000366744 RGS21Q2M5E4 152 aa6.77□□□□□ -1.33
MRPL55-216ENST00000366744 IGFL4Q6B9Z1 124 aa6.77□□□□□ -1.33
MRPL55-216ENST00000366744 PATE2Q6UY27 113 aa6.77□□□□□ -1.33
MRPL55-216ENST00000366744 CHAC2Q8WUX2 184 aa6.77□□□□□ -1.33
MRPL55-216ENST00000366744 TMEM37Q8WXS4 190 aa6.77□□□□□ -1.33
MRPL55-216ENST00000366744 RPUSD4Q96CM3 377 aaKnown RBP6.77□□□□□ -1.33
MRPL55-216ENST00000366744 C20orf173Q96LM9 149 aa6.77□□□□□ -1.33
MRPL55-216ENST00000366744 LYSTQ99698 3801 aa6.77□□□□□ -1.33
MRPL55-216ENST00000366744 MRPL32Q9BYC8 188 aaKnown RBP6.77□□□□□ -1.33
MRPL55-216ENST00000366744 SLC35B3Q9H1N7 401 aa6.77□□□□□ -1.33
MRPL55-216ENST00000366744 AAMDCQ9H7C9 122 aa6.77□□□□□ -1.33
MRPL55-216ENST00000366744 HSPB11Q9Y547 144 aa6.77□□□□□ -1.33
MRPL55-216ENST00000366744 hCG_2014768A0A024R1R8 64 aa6.76□□□□□ -1.33
MRPL55-216ENST00000366744 TRAV8-2A0A0B4J237 113 aa6.76□□□□□ -1.33
MRPL55-216ENST00000366744 EMP1P54849 157 aa6.76□□□□□ -1.33
MRPL55-216ENST00000366744 RRN3P1Q2M238 152 aa6.76□□□□□ -1.33
MRPL55-216ENST00000366744 ZNF705AQ6ZN79 300 aaPredicted RBP6.76□□□□□ -1.33
MRPL55-216ENST00000366744 Q6ZNX1 250 aa6.76□□□□□ -1.33
MRPL55-216ENST00000366744 CSNK1G2-AS1Q8NCQ2 148 aa6.76□□□□□ -1.33
MRPL55-216ENST00000366744 OR11H7Q8NGC8 314 aa6.76□□□□□ -1.33
MRPL55-216ENST00000366744 OR8A1Q8NGG7 326 aa6.76□□□□□ -1.33
MRPL55-216ENST00000366744 C2CD4CQ8TF44 421 aa6.76□□□□□ -1.33
MRPL55-216ENST00000366744 ASB13Q8WXK3 278 aa6.76□□□□□ -1.33
MRPL55-216ENST00000366744 IGF2BP2-AS1Q96M15 143 aa6.76□□□□□ -1.33
MRPL55-216ENST00000366744 NEU1Q99519 415 aa6.76□□□□□ -1.33
MRPL55-216ENST00000366744 WDR61Q9GZS3 305 aaKnown RBP6.76□□□□□ -1.33
MRPL55-216ENST00000366744 ZNF331Q9NQX6 463 aaPredicted RBP6.76□□□□□ -1.33
MRPL55-216ENST00000366744 TIMM9Q9Y5J7 89 aa6.76□□□□□ -1.33
MRPL55-216ENST00000366744 X6R8D5 127 aa6.76□□□□□ -1.33
MRPL55-216ENST00000366744 TRAV10A0A0B4J240 114 aa6.75□□□□□ -1.33
MRPL55-216ENST00000366744 ZNF705FA8MVS1 300 aaPredicted RBP6.75□□□□□ -1.33
MRPL55-216ENST00000366744 H0YIZ8 118 aa6.75□□□□□ -1.33
MRPL55-216ENST00000366744 M0R2Z0 102 aa6.75□□□□□ -1.33
MRPL55-216ENST00000366744 OR7C2O60412 319 aa6.75□□□□□ -1.33
MRPL55-216ENST00000366744 ZNF253O75346 499 aa6.75□□□□□ -1.33
MRPL55-216ENST00000366744 ZNF705DP0CH99 300 aaPredicted RBP6.75□□□□□ -1.33
MRPL55-216ENST00000366744 ZNF705BP0CI00 300 aaPredicted RBP6.75□□□□□ -1.33
MRPL55-216ENST00000366744 IGLC2P0DOY2 106 aa6.75□□□□□ -1.33
MRPL55-216ENST00000366744 TSPOP30536 169 aa6.75□□□□□ -1.33
MRPL55-216ENST00000366744 TCTAP57738 103 aa6.75□□□□□ -1.33
MRPL55-216ENST00000366744 TAS2R45P59539 299 aa6.75□□□□□ -1.33
MRPL55-216ENST00000366744 PDE6HQ13956 83 aa6.75□□□□□ -1.33
MRPL55-216ENST00000366744 ZNF266Q14584 549 aa6.75□□□□□ -1.33
MRPL55-216ENST00000366744 SPINK13Q1W4C9 94 aa6.75□□□□□ -1.33
MRPL55-216ENST00000366744 KHDC3LQ587J8 217 aa6.75□□□□□ -1.33
MRPL55-216ENST00000366744 TMEM256Q8N2U0 113 aa6.75□□□□□ -1.33
MRPL55-216ENST00000366744 SMIM3Q9BZL3 60 aa6.75□□□□□ -1.33
MRPL55-216ENST00000366744 TMEM14CQ9P0S9 112 aa6.75□□□□□ -1.33
MRPL55-216ENST00000366744 DYNC2H1Q8NCM8 4307 aaKnown RBP6.74□□□□□ -1.33
MRPL55-216ENST00000366744 LOC102723971A0A1B0GUV8 181 aa6.74□□□□□ -1.33
MRPL55-216ENST00000366744 H3BTX0 84 aa6.74□□□□□ -1.33
MRPL55-216ENST00000366744 SLC17A3O00476 420 aa6.74□□□□□ -1.33
MRPL55-216ENST00000366744 MRPS12O15235 138 aaKnown RBP6.74□□□□□ -1.33
MRPL55-216ENST00000366744 LY6G6CO95867 125 aa6.74□□□□□ -1.33
MRPL55-216ENST00000366744 SNRPCP09234 159 aaKnown RBP6.74□□□□□ -1.33
MRPL55-216ENST00000366744 SPART-AS1P0CW21 52 aa6.74□□□□□ -1.33
MRPL55-216ENST00000366744 RBMY1A1P0DJD3 496 aaKnown RBP6.74□□□□□ -1.33
MRPL55-216ENST00000366744 RBMY1CP0DJD4 496 aa6.74□□□□□ -1.33
MRPL55-216ENST00000366744 HIST1H1EP10412 219 aaKnown RBP6.74□□□□□ -1.33
MRPL55-216ENST00000366744 HLA-DMBP28068 263 aa6.74□□□□□ -1.33
MRPL55-216ENST00000366744 UBE2L3P68036 154 aaKnown RBP6.74□□□□□ -1.33
MRPL55-216ENST00000366744 RBMY1FQ15415 496 aaKnown RBP6.74□□□□□ -1.33
MRPL55-216ENST00000366744 FFAR4Q5NUL3 377 aa6.74□□□□□ -1.33
MRPL55-216ENST00000366744 MORN5Q5VZ52 161 aa6.74□□□□□ -1.33
MRPL55-216ENST00000366744 BAP18Q8IXM2 172 aa6.74□□□□□ -1.33
MRPL55-216ENST00000366744 BLNKQ8WV28 456 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms